New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5552384106 (1.200)7 (0.080) 7/234 NT 6.8% coding (1565/1566 nt) PP_4882 iron ABC transporter permease
?NC_002947 = 5552417 91 (1.090)intergenic (+32/+629) PP_4882/PP_5717 iron ABC transporter permease/hypothetical protein

Only 100 of 144 total aligned reads displayed.

GACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAAC  >  NC_002947/5552235‑5552532
                                                                                                                                                      |                                                                                                                                                     
   cGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGaaa                                                                                                                                                    >  2:1838736/1‑150 (MQ=255)
         gACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGc                                                                                                                                              <  1:509066/150‑1 (MQ=255)
            caccCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCa                                                                                                                                           >  2:244339/1‑150 (MQ=255)
            caccCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCa                                                                                                                                           >  2:2244765/1‑150 (MQ=255)
            caccCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGAATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCa                                                                                                                                           >  2:1145434/1‑150 (MQ=255)
              cccTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGAACGCAAGAGTGCTTTGC‑GAGAATGCGTGTGTATTTGAACAAGGCTTGAAAGCTTGCCCAgg                                                                                                                                         >  1:1686543/1‑150 (MQ=255)
                 tGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGgccg                                                                                                                                      >  2:820033/1‑150 (MQ=255)
                   gCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTAGAACAAGGCTTGAAAGCTTGCCCAGgccgcc                                                                                                                                    <  2:64284/150‑1 (MQ=255)
                       ccGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCAtgt                                                                                                                                <  1:1665475/150‑1 (MQ=255)
                        cGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCAtgtg                                                                                                                               >  1:340982/1‑150 (MQ=255)
                             tgtgGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTg                                                                                                                          >  1:1006596/1‑150 (MQ=255)
                             tgtgGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGAATACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTg                                                                                                                          <  2:1690935/150‑1 (MQ=255)
                               tgGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGc                                                                                                                                              >  1:536283/1‑128 (MQ=255)
                               tgGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTggg                                                                                                                        <  2:838193/150‑1 (MQ=255)
                               tgGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTggg                                                                                                                        <  2:1006596/150‑1 (MQ=255)
                               tgGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTggg                                                                                                                        >  1:846158/1‑150 (MQ=255)
                                  gCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Ac                                                                                                                    >  1:2244075‑M2/1‑149 (MQ=255)
                                    acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTg                                                                                                                          >  1:163274/1‑143 (MQ=255)
                                    acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTg                                                                                                                          <  2:163274/143‑1 (MQ=255)
                                    acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaa                                                                                                                  <  1:835735‑M2/150‑4 (MQ=255)
                                    acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaa                                                                                                                  <  1:1973046‑M2/150‑4 (MQ=255)
                                    acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCACCATGTGGCCTGGGC‑Acaa                                                                                                                  <  1:336667‑M2/150‑4 (MQ=255)
                                      acacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAgg                                                                                                                                         >  2:1261273/1‑126 (MQ=255)
                                        acaGCTAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGcc                                                                                                                                             >  1:2031458/1‑120 (MQ=255)
                                        acaGCTAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGcc                                                                                                                                             <  2:2031458/120‑1 (MQ=255)
                                        acaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagcct                                                                                                              <  2:914825‑M2/150‑8 (MQ=255)
                                        acaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagcct                                                                                                              >  1:1515611‑M2/1‑143 (MQ=255)
                                           gCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTCTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGtgcccaggccacatggcggcctgggcaagctttcaagccttgt                                                                                                            <  1:2261120‑M1/150‑44 (MQ=255)
                                            ccAACGTCGAGTGCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGTGGTGGCCGGTGT‑CTTTGCTGCCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGt                                                                                                          <  2:315841/150‑1 (MQ=255)
                                                 gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAATGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTa                                                                                                     >  1:945884/1‑150 (MQ=255)
                                                 gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGc‑aa                                                                                                                    >  2:1972425/1‑134 (MQ=255)
                                                 gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTa                                                                                                     <  2:1363133/150‑1 (MQ=255)
                                                 gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATGTGCTGACTACGGGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGCGCCTa                                                                                                     >  1:2209038/1‑150 (MQ=255)
                                                  tCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGc                                                                                                                                                  >  2:882319/1‑105 (MQ=255)
                                                  tCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGc                                                                                                                                                  <  1:882319/105‑1 (MQ=255)
                                                    gAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCAAGGCCACCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGAc                                                                                                  <  2:336667/150‑1 (MQ=255)
                                                       ttCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGc                                                                                                                                              >  1:875540/1‑104 (MQ=255)
                                                       ttCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGc                                                                                                                                              <  2:875540/104‑1 (MQ=255)
                                                        tCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGaaagctcgcccaggccacatggcggcctgggcaagctttcaa                                                                                                             <  1:204119‑M1/136‑43 (MQ=255)
                                                              cggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACaa                                                                                        <  1:1641779/150‑1 (MQ=255)
                                                              cggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACaa                                                                                        <  1:378697/150‑1 (MQ=255)
                                                                   gcgcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGtgcccaggccacatggcggcctgggcaagctttcaagccttg                                                                                                             >  2:261854‑M1/1‑83 (MQ=255)
                                                                   gcgcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGtgcccaggccacatggcggcctgggcaagctttcaagccttg                                                                                                             <  1:261854‑M1/125‑43 (MQ=255)
                                                                    cgcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCAc                                                                                  <  2:2212830/150‑1 (MQ=255)
                                                                     gcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                 <  1:1839513/150‑1 (MQ=255)
                                                                        gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                 <  2:2324204/147‑1 (MQ=255)
                                                                        gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                 >  1:2324204/1‑147 (MQ=255)
                                                                         tATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTaa                                                                             <  1:820033/150‑1 (MQ=255)
                                                                            gcggcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAAc                                                                          >  1:2127836/1‑150 (MQ=255)
                                                                               gcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActct                                                                       <  2:1642711/150‑1 (MQ=255)
                                                                               gcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActcc                                                                       <  2:1973046/150‑2 (MQ=255)
                                                                                cgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACtctc                                                                      <  1:183840/150‑1 (MQ=255)
                                                                                  ttgttgATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCAc                                                                    <  1:1020556/150‑1 (MQ=255)
                                                                                    gttgATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                  <  1:914825/150‑1 (MQ=255)
                                                                                    gttgATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                  >  1:184292/1‑150 (MQ=255)
                                                                                    gttgATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                  <  2:184292/150‑1 (MQ=255)
                                                                                      tgATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCAtgt                                                                                                                                <  2:1391371/87‑1 (MQ=255)
                                                                                      tgATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCAtgt                                                                                                                                >  1:1391371/1‑87 (MQ=255)
                                                                                      tgATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc                                                                <  1:1145434/150‑1 (MQ=255)
                                                                                        aTTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCa                                                              <  1:244339/150‑1 (MQ=255)
                                                                                           gtggtgTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGtt                                                           <  2:835735/150‑1 (MQ=255)
                                                                                             ggtgTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                 <  1:2150308/126‑1 (MQ=255)
                                                                                             ggtgTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                 >  2:2150308/1‑126 (MQ=255)
                                                                                              gtgtCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGa                                                                                                            >  2:431843/1‑98 (MQ=255)
                                                                                               tgtCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                       <  2:1340053/150‑1 (MQ=255)
                                                                                               tgtCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACCTTAAACCTCTCACTAGCCAGTTGaaa                                                       <  2:1529893/150‑1 (MQ=255)
                                                                                               tgtCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCAGGTCGCCTGCGC‑TCAAGCCTCAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                       <  2:1529841/150‑1 (MQ=255)
                                                                                                 tCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTc                                                                                    <  2:887157/119‑1 (MQ=255)
                                                                                                 tCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTc                                                                                    >  1:887157/1‑119 (MQ=255)
                                                                                                 gcGGGGTTTCCGGTGG‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGc                                                     <  2:2005436/149‑1 (MQ=255)
                                                                                                     ggTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg                                                 <  1:279531/150‑1 (MQ=255)
                                                                                                          ccGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc                                                                <  2:890757/130‑1 (MQ=255)
                                                                                                          ccGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc                                                                >  1:890757/1‑130 (MQ=255)
                                                                                                           cGGTGT‑ATGTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGACAGCAAAGCACAAg                                           <  2:623721/150‑1 (MQ=255)
                                                                                                            ggTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCtt                                                                                                                                                >  1:1305047/1‑49 (MQ=255)
                                                                                                             gtgt‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGtgcccaggccacatggcggcctgggcaagctttcaagcctt                                                                                                              <  2:1965819‑M1/82‑42 (MQ=255)
                                                                                                             gtgt‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGtgcccaggccacatggcggcctgggcaagctttcaagcctt                                                                                                              >  1:1965819‑M1/1‑41 (MQ=255)
                                                                                                                          aCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                         <  2:250077/122‑1 (MQ=255)
                                                                                                                          aCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                         >  1:250077/1‑122 (MQ=255)
                                                                                                                           cTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                        <  1:386193/138‑1 (MQ=255)
                                                                                                                           cTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                        >  2:386193/1‑138 (MQ=255)
                                                                                                                                 ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg                                                 <  1:2256130/123‑1 (MQ=255)
                                                                                                                                    tGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccacc                   <  2:1945044/150‑1 (MQ=255)
                                                                                                                                     gTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATNTGGCNTGGNC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccaccc                  >  1:1945044/1‑150 (MQ=255)
                                                                                                                                        tttGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAag               >  1:568545/1‑150 (MQ=255)
                                                                                                                                           gAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAgg            <  2:2127836/150‑1 (MQ=255)
                                                                                                                                            aaCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAggg           <  1:296105/150‑1 (MQ=255)
                                                                                                                                             aCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCCGGTT‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTATAAGCCCCACCCAAGAGGGt          <  1:1777776/150‑1 (MQ=255)
                                                                                                                                              cAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgc                                  >  2:261854‑M2/1‑42 (MQ=255)
                                                                                                                                              cAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgc                                  <  1:261854‑M2/125‑84 (MQ=255)
                                                                                                                                               aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacac                                                                            >  1:1965819‑M2/1‑41 (MQ=255)
                                                                                                                                               aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAACAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTaa        >  2:915419/1‑150 (MQ=255)
                                                                                                                                                aGGCTTGtgcccaggccacatggcggcctgggcaagctttcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcgaactcgacgttggctgt        >  1:1515611‑M1/1‑7 (MQ=255)
                                                                                                                                                    ttGtgcccaggccacatggcggcctgggcaagctttcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcgaactcgacgttggctgtgtgt    <  1:1973046‑M1/150‑148 (MQ=255)
                                                                                                                                                    ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCGAgctttcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcga                  >  2:204119‑M2/1‑37 (MQ=255)
                                                                                                                                                    ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCGTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa   >  2:1908000/1‑150 (MQ=255)
                                                                                                                                                    ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa   >  1:778616/1‑150 (MQ=255)
                                                                                                                                                      gtgcccaggccacatggcggcctgggcaagctttcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcgaactcgacgttggctgtgtgtgc  >  1:2244075‑M1/1‑1 (MQ=255)
                                                                                                                                                      gAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                       <  1:163337/96‑1 (MQ=255)
                                                                                                                                                      gAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                       >  2:163337/1‑96 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGT‑ATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAAC  >  NC_002947/5552235‑5552532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.