New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5552384 | 106 (1.200) | 7 (0.080) | 7/234 | NT | 6.8% | coding (1565/1566 nt) | PP_4882 | iron ABC transporter permease |
? | NC_002947 | = 5552417 | 91 (1.090) | intergenic (+32/+629) | PP_4882/PP_5717 | iron ABC transporter permease/hypothetical protein |
Only 100 of 113 total aligned reads displayed.
GCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCT > NC_002947/5552269‑5552566 | gCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Ac > 1:2244075‑M2/1‑149 (MQ=255) acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaa < 1:1973046‑M2/150‑4 (MQ=255) acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaa < 1:835735‑M2/150‑4 (MQ=255) acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCACCATGTGGCCTGGGC‑Acaa < 1:336667‑M2/150‑4 (MQ=255) acaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagcct < 2:914825‑M2/150‑8 (MQ=255) acaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagcct > 1:1515611‑M2/1‑143 (MQ=255) ccAACGTCGAGTGCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGTGGTGGCCGGTGTCTTTGCTGCCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGt < 2:315841/150‑1 (MQ=255) aaCGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGc > 2:1973866/1‑150 (MQ=255) gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAATGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTa > 1:945884/1‑150 (MQ=255) gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGc‑aa < 1:1972425/135‑2 (MQ=255) gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGc‑aa > 2:1972425/1‑134 (MQ=255) gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTa < 2:1363133/150‑1 (MQ=255) gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATGTGCTGACTACGGGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGCGCCTa > 1:2209038/1‑150 (MQ=255) tCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAg > 1:623721/1‑150 (MQ=255) gAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCAAGGCCACCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGAc < 2:336667/150‑1 (MQ=255) ttCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTtc > 2:917842/1‑150 (MQ=255) cggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACaa < 1:378697/150‑1 (MQ=255) cggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACaa < 2:846158/150‑1 (MQ=255) cgcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCAc < 2:2212830/150‑1 (MQ=255) gcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt < 1:1839513/150‑1 (MQ=255) gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt < 2:2324204/147‑1 (MQ=255) gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt > 1:2324204/1‑147 (MQ=255) tATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTaa < 1:820033/150‑1 (MQ=255) gcggcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAAc > 1:2127836/1‑150 (MQ=255) gcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActcc < 2:1973046/150‑2 (MQ=255) cgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACtctc < 1:183840/150‑1 (MQ=255) ttgttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCAc < 1:1020556/150‑1 (MQ=255) gttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa < 1:914825/150‑1 (MQ=255) gttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa < 2:184292/150‑1 (MQ=255) gttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa > 1:184292/1‑150 (MQ=255) tgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc < 1:1145434/150‑1 (MQ=255) gATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCa < 2:2172631/144‑1 (MQ=255) aTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCa > 2:1559214/1‑150 (MQ=255) aTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCa < 1:244339/150‑1 (MQ=255) ggtgTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt < 1:2150308/126‑1 (MQ=255) gtgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGa > 2:431843/1‑98 (MQ=255) gtgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGa < 1:431843/98‑1 (MQ=255) tgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa < 2:1340053/150‑1 (MQ=255) tgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACCTTAAACCTCTCACTAGCCAGTTGaaa < 2:1529893/150‑1 (MQ=255) tgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCAGGTCGCCTGCGC‑TCAAGCCTCAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa < 2:1529841/150‑1 (MQ=255) tCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTc < 2:887157/119‑1 (MQ=255) tCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTc > 1:887157/1‑119 (MQ=255) gcGGGGTTTCCGGTGGATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGc < 2:2005436/149‑1 (MQ=255) ggTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg < 1:279531/150‑1 (MQ=255) ggTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg < 1:917842/150‑1 (MQ=255) ccGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc < 2:890757/130‑1 (MQ=255) ccGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc > 1:890757/1‑130 (MQ=255) ccGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTAGTAAAGAGTTCACTCAATTACTCGCACGAGCCAGTTGAAAGCAAAGAaaaa > 2:1777776/1‑150 (MQ=255) cGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAg > 2:296105/1‑150 (MQ=255) cGGTGTATGTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGACAGCAAAGCACAAg < 2:623721/150‑1 (MQ=255) gtATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCACATGGCGGCCTGGGc‑aa > 1:1617336/1‑72 (MQ=25) cTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAtac < 2:340982/150‑1 (MQ=255) aCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa > 1:250077/1‑122 (MQ=255) aCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa < 2:250077/122‑1 (MQ=255) cTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc > 2:386193/1‑138 (MQ=255) cTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc < 1:386193/138‑1 (MQ=255) ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg > 2:2256130/1‑123 (MQ=255) ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg < 1:2256130/123‑1 (MQ=255) tGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccacc < 2:1945044/150‑1 (MQ=255) aTTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACtctc > 1:886580/1‑96 (MQ=255) aTTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACtctc < 2:886580/96‑1 (MQ=255) tttGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAag > 1:1649910/1‑150 (MQ=255) tttGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAag > 1:568545/1‑150 (MQ=255) gAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAgg < 2:2127836/150‑1 (MQ=255) aaCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAggg < 1:296105/150‑1 (MQ=255) aCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccagaatcaacaacgccgcatacggcgccgccgccgcgaactcgacgttggc < 1:2261120‑M2/150‑108 (MQ=255) aCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCCGGTT‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTATAAGCCCCACCCAAGAGGGt < 1:1777776/150‑1 (MQ=255) cAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgc > 2:261854‑M2/1‑42 (MQ=255) aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacac > 1:1965819‑M2/1‑41 (MQ=255) aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAta > 1:1472584/1‑125 (MQ=255) aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAta < 2:1472584/125‑1 (MQ=255) aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAACAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTaa > 2:915419/1‑150 (MQ=255) ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCGAgctttcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcga > 2:204119‑M2/1‑37 (MQ=255) ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCGAgctttcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcga < 1:204119‑M2/136‑100 (MQ=255) ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCGTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa > 2:1908000/1‑150 (MQ=255) ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa < 1:1838736/150‑1 (MQ=255) ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa > 1:778616/1‑150 (MQ=255) gAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa > 2:163337/1‑96 (MQ=255) gAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa < 1:163337/96‑1 (MQ=255) aaaGCCTGCCCAGGCCACAATGTGACCTGGGC‑ACAAGCCTTAGTGTCTACATTTCATCACAAGTTCACTTTAAACCTCTCACTAGCCAGTTCAACGCAAATAACAAGGTCGTAGATACTACAAACCCCACCCAAGAGGGTAACAAAActc < 2:2209038/150‑1 (MQ=255) cccAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa < 2:387744/139‑1 (MQ=255) cccAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATa > 1:1086589/1‑150 (MQ=255) cAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGccc > 1:692259/1‑117 (MQ=255) cAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGccc < 2:692259/117‑1 (MQ=255) aGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTCGCCTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGGACAAGGTCGTAGATACTACAAGCCCCACCCAAGTGGGTAACAAAACTTTTTTTATAGaa > 1:355675/1‑149 (MQ=255) ggCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCtt > 1:1743347/1‑140 (MQ=255) ggCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCtt < 2:1743347/140‑1 (MQ=255) gccgccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCt < 1:1973866/150‑1 (MQ=255) cgccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc > 1:308616/1‑95 (MQ=255) cgccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTg < 2:1086589/150‑1 (MQ=255) gccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTa < 1:1955864/97‑1 (MQ=255) gccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTa > 2:1955864/1‑97 (MQ=255) ccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTggg > 1:1372097/1‑150 (MQ=255) tgGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGACAAAGGTAGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAAcc > 1:861882/1‑150 (MQ=255) ccTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTc < 2:1686543/150‑1 (MQ=255) cTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCg > 2:2148225/1‑150 (MQ=255) cTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCg > 2:1180175/1‑150 (MQ=255) c‑acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCa < 2:1737136/125‑1 (MQ=255) c‑acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCa > 1:1737136/1‑125 (MQ=255) acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCt > 1:371383/1‑150 (MQ=255) | GCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCT > NC_002947/5552269‑5552566 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |