BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	683103 =	156 (0.920)	32 (0.190)	14/192	17.5	17.2%	coding (291/1671 nt)	hscC	Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor
*	?	NC_000913	= 2067353	NA (NA)	32 (0.190)	14/192	17.5	17.2%	noncoding (1/1195 nt)	IS5	repeat region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 165 total aligned reads displayed.

CGTTGTTCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGTTTTATCCGG  >  NC_000913/683005‑683201

cGTTGTTCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATAcc                                                                                                    >  1:1564135/1‑99 (MQ=255)

 gttgttCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTATTGATCGTAATACCa                                                                                                   >  1:3050490/1‑99 (MQ=255)

 gttgttCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCa                                                                                                   >  2:2031920/1‑99 (MQ=255)

 gttgttCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCa                                                                                                   >  1:3927349/1‑99 (MQ=255)

   tgttCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCaaa                                                                                                 >  1:3757172/1‑99 (MQ=255)

   tgttCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCaaa                                                                                                 <  1:3309856/99‑1 (MQ=255)

    gttCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAag                                                                                                >  2:1845118/1‑99 (MQ=255)

      tCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAagag                                                                                              >  1:120906/1‑99 (MQ=255)

       cATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAgg                                                                                             >  2:2366887/1‑99 (MQ=255)

       cATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAgg                                                                                             >  2:1921055/1‑99 (MQ=255)

       cATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAgg                                                                                             <  1:1798656/99‑1 (MQ=255)

       cATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAgg                                                                                             >  2:687266/1‑99 (MQ=255)

        aTCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGa                                                                                            <  2:1519239/99‑1 (MQ=255)

        aTCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGa                                                                                            >  1:625384/1‑99 (MQ=255)

        aTCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGa                                                                                            >  1:2250407/1‑99 (MQ=255)

        aTCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGa                                                                                            <  1:974404/99‑1 (MQ=255)

         tCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGAc                                                                                           >  1:2465713/1‑99 (MQ=255)

            cTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGt                                                                                        >  1:3637995/1‑99 (MQ=255)

             tGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGtt                                                                                       >  2:3708344/1‑99 (MQ=255)

             tGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGtt                                                                                       >  2:3008157/1‑99 (MQ=255)

                  tAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGgc                                                                                  >  1:2834889/1‑99 (MQ=255)

                  tAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGgc                                                                                  <  1:911955/99‑1 (MQ=255)

                   aaGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGgcg                                                                                 >  2:395039/1‑99 (MQ=255)

                    aGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGgcgc                                                                                >  2:3186755/1‑99 (MQ=255)

                    aGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGgcgc                                                                                <  2:3592266/99‑1 (MQ=255)

                     gCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGcgcg                                                                               >  2:1796637/1‑99 (MQ=255)

                      ccGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGt                                                                              <  2:2384022/99‑1 (MQ=255)

                       cGGAACGGAGATCACCACATCTTTAATCGGACGTTGTAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGCCAGTTCTGGCGCGtt                                                                             >  2:2627111/1‑99 (MQ=255)

                       cGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGtt                                                                             <  2:3110253/99‑1 (MQ=255)

                        ggAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTa                                                                            >  1:1082143/1‑99 (MQ=255)

                        ggAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTa                                                                            >  1:3179627/1‑99 (MQ=255)

                         gAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTaa                                                                           >  2:2693149/1‑99 (MQ=255)

                           aCGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAAt                                                                         >  2:2247081/1‑99 (MQ=255)

                             ggAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAAtgt                                                                       >  1:2316836/1‑99 (MQ=255)

                                gaTCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATCAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAGTGTGTc                                                                    >  2:3382584/1‑99 (MQ=255)

                                 aTCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCg                                                                   <  2:3266613/99‑1 (MQ=255)

                                 aTCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCg                                                                   >  2:454992/1‑99 (MQ=255)

                                   caccacATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCt                                                                 <  2:1680887/99‑1 (MQ=255)

                                   caccacATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCt                                                                 <  1:184770/99‑1 (MQ=255)

                                    accacATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTg                                                                >  1:937594/1‑99 (MQ=255)

                                     ccacATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGc                                                               >  2:3268156/1‑99 (MQ=255)

                                     ccacATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGc                                                               <  1:4330015/99‑1 (MQ=255)

                                      cacaTCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGcc                                                              >  2:881011/1‑99 (MQ=255)

                                          tCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAAc                                                          >  2:2752967/1‑99 (MQ=255)

                                           cTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAAcc                                                         <  2:1071/99‑1 (MQ=255)

                                            tttAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCg                                                        >  1:2967569/1‑99 (MQ=255)

                                            tttAATCGGACGTTGCAGAAAATCTTCGCCCTCCTCCTTTAATCAGCCTAACACCAAACAGGACAGTTCTCGCGCGTCCAATCCGTCGCTGCCGCACCg                                                        >  2:3441627/1‑99 (MQ=255)

                                               aaTCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCa                                                     >  1:3792244/1‑99 (MQ=255)

                                                 tCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGt                                                   >  1:51453/1‑99 (MQ=255)

                                                 tCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGt                                                   <  1:1229039/99‑1 (MQ=255)

                                                   gggcGTTGCAGAGATTATTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTGAGTGTGTCGCTGCGTAACCGCCAGTTg                                                 >  2:1255463/4‑99 (MQ=255)

                                                   ggACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTg                                                 <  2:1712872/99‑1 (MQ=255)

                                                     aCGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGt                                               <  1:2532729/99‑1 (MQ=255)

                                                      cGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTa                                              <  2:2909404/99‑1 (MQ=255)

                                                      cGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTa                                              <  1:2059735/99‑1 (MQ=255)

                                                       gTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTAt                                             <  1:2116798/99‑1 (MQ=255)

                                                         tGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTa                                           <  1:421983/99‑1 (MQ=255)

                                                          gCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTAc                                          >  2:3990441/1‑99 (MQ=255)

                                                           cAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACt                                         <  1:1305978/99‑1 (MQ=255)

                                                            aGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTg                                        >  2:2106003/1‑99 (MQ=255)

                                                            aGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTg                                        >  1:2003422/1‑99 (MQ=255)

                                                            aGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTg                                        <  1:2661808/99‑1 (MQ=255)

                                                             gAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGc                                       <  2:3509869/99‑1 (MQ=255)

                                                             gAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGc                                       >  2:1032325/1‑99 (MQ=255)

                                                             gAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGc                                       <  2:3527896/99‑1 (MQ=255)

                                                             gAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGAAAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGc                                       >  2:1032440/1‑99 (MQ=255)

                                                                aTTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCa                                    >  1:2745482/1‑99 (MQ=255)

                                                                 ttcttcGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCAt                                   >  2:3074005/1‑99 (MQ=255)

                                                                 ttcttcGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCAt                                   >  1:1008636/1‑99 (MQ=255)

                                                                  tcttcGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCAtt                                  <  2:2761709/99‑1 (MQ=255)

                                                                  tcttcGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTACCTAAGCGCAAGTTGGTATTACTGCTCAtt                                  >  2:3809454/1‑99 (MQ=255)

                                                                   cttcGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTg                                 >  2:3876448/1‑99 (MQ=255)

                                                                    ttcGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGc                                >  2:3110639/1‑99 (MQ=255)

                                                                      cGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCAc                              >  2:2248033/1‑99 (MQ=255)

                                                                      cGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCAc                              <  1:1427713/99‑1 (MQ=255)

                                                                        gCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGt                            <  1:3046948/99‑1 (MQ=255)

                                                                        gCATCTTCTCTTAATGAGCGTAACACCAAAGAGGACAGTTCTTGCGCGTTAAATGTGTCGTTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGt                            <  1:3789898/99‑1 (MQ=255)

                                                                         cATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGtt                           >  1:1346118/1‑99 (MQ=255)

                                                                          aTCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGttt                          <  2:2798459/99‑1 (MQ=255)

                                                                          aTCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGttt                          >  1:587087/1‑99 (MQ=255)

                                                                            cttcttTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTTCTGCCCATTGCACGTTTaa                        >  2:1395370/1‑99 (MQ=255)

                                                                             ttcttTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTaaa                       >  1:1501203/1‑99 (MQ=255)

                                                                             ttcttTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTaaa                       >  2:799943/1‑99 (MQ=255)

                                                                             ttcttTTAATGAGCGTAATACCAAAGAGCAAAGTTCTGGCACGTTAAAAGTGACACTGCCTAACCGCCAGTTGGGATTACTGCCCATTGCACGTTTaaa                       >  2:1003844/1‑99 (MQ=255)

                                                                               cttTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATa                     >  1:701852/1‑99 (MQ=255)

                                                                               cttTTAATGAGCGTAATACCAAAGAAGGCAGTTCTGGCGCGCTAAATGAGTCGCTACCTAACCGCCGGGGGGTATTACTGCCCATTNCACGTTTAAAtt                     >  1:4105268/1‑98 (MQ=255)

                                                                                ttttAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATaa                    <  2:2585656/99‑1 (MQ=255)

                                                                                 tttAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAAc                   <  1:2133106/99‑1 (MQ=255)

                                                                                 gttAATGAGCGTAATACCAAAGAGTACAGGTCTGGCTCGTTAAAGGTGTCGCTGCCGAACCTCCAGTTGGTATTACTTCCCATTGCACGTTTAAATAAc                   <  2:2066699/98‑1 (MQ=255)

                                                                                  ttAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACg                  <  2:4147068/99‑1 (MQ=255)

                                                                                       gAGCGTAATATCCAAGAGGACACGTCTGTCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGcc             <  2:3672051/99‑1 (MQ=255)

                                                                                          cGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGtt          >  1:2572585/1‑99 (MQ=255)

                                                                                          cGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGtt          <  2:2433828/99‑1 (MQ=255)

                                                                                            tAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGtttt        <  1:3515939/99‑1 (MQ=255)

                                                                                                 ccAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGTTTTATCCg   >  1:1202393/1‑99 (MQ=255)

                                                                                                 ccAAAGAGGACAGTTCTGGCGAGTTAAATGTGTCGCTGCATAACCGACAGTTGGTATTACTGACCATTGCACGTTTAAATAATGCTGTCGTTTTATACg   >  2:3362756/1‑99 (MQ=255)

                                                                                                  cAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGTTTTATCCgg  >  2:3018683/1‑99 (MQ=255)

                                                                                                  cAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGTTTTATCCgg  >  1:4182099/1‑99 (MQ=255)

                                                                                                  cAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGTTTTATCCgg  >  1:749561/1‑99 (MQ=255)

                                                                                                  cAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGTTTTATCCgg  >  2:914819/1‑99 (MQ=255)

CGTTGTTCATCGCTGAAATAAGCCGGAACGGAGATCACCACATCTTTAATCGGACGTTGCAGAAATTCTTCGGCATCTTCTTTTAATGAGCGTAATACCAAAGAGGACAGTTCTGGCGCGTTAAATGTGTCGCTGCCTAACCGCCAGTTGGTATTACTGCCCATTGCACGTTTAAATAACGCTGCCGTTTTATCCGG  >  NC_000913/683005‑683201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.