BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	683103 =	156 (0.920)	32 (0.190)	14/192	17.5	17.2%	coding (291/1671 nt)	hscC	Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor
*	?	NC_000913	= 2067353	NA (NA)	32 (0.190)	14/192	17.5	17.2%	noncoding (1/1195 nt)	IS5	repeat region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 183 total aligned reads displayed.

ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCG  >  NC_000913/2067256‑2067451

aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTccc                                                                                                   >  2:4082600/1‑99 (MQ=35)

aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTccc                                                                                                   >  2:3894618/1‑99 (MQ=35)

aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTccc                                                                                                   >  1:1548852/1‑99 (MQ=35)

 cTGTCGGCTAAGGGAAGTTGATGACTCATGATGAACCCGGTTCCATTGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCt                                                                                                  <  1:1081365/99‑1 (MQ=11)

 cTGTCGGCGGAGGTAAGTGGATGACTCATGATGAGCCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCt                                                                                                  <  2:1458905/99‑1 (MQ=255)

  tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTa                                                                                                 <  2:3745913/99‑1 (MQ=38)

  tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTa                                                                                                 <  2:2049332/99‑1 (MQ=38)

     cGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGaa                                                                                              <  2:1570514/99‑1 (MQ=255)

       gCGAATGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAaca                                                                                            <  1:611128/99‑1 (MQ=255)

       gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAaca                                                                                            >  2:3271477/1‑99 (MQ=255)

       gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAaca                                                                                            >  2:1011791/1‑99 (MQ=255)

          aaGGGAAGTTGATGACGCATGATGAACCCTGTTCCATGGCTCCAGATGACGAACATGACCTCATATCAAGGACTTGTTCGCACCTTCCCTAGAAcacca                                                                                         <  2:21938/99‑1 (MQ=14)

             gTAAGTTGATGACTCATGAGGAACCCGGTTCCATGGCTCCAGATGACAAACATGATCTCATATCATTGACTTGTGCGCTCCTTCCCTAGAACACCACaa                                                                                      >  2:2789589/1‑99 (MQ=17)

              tAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAAt                                                                                     >  2:1292801/1‑99 (MQ=255)

               aaGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAAtt                                                                                    >  1:3702601/1‑99 (MQ=255)

                tgTTGATGACTCATGATGACCCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAAttt                                                                                   <  1:200371/98‑1 (MQ=255)

                aGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAAttt                                                                                   <  1:4135019/99‑1 (MQ=255)

                aGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAAttt                                                                                   >  1:336595/1‑99 (MQ=255)

                  ttGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCg                                                                                 >  1:1545384/1‑99 (MQ=255)

                  ttGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCg                                                                                 >  1:3376517/1‑99 (MQ=255)

                    gatgaCTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGct                                                                               >  1:46172/1‑99 (MQ=255)

                    gatgaCTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGct                                                                               <  1:4206146/99‑1 (MQ=255)

                    gatgaCTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGct                                                                               >  2:1994357/1‑99 (MQ=255)

                    gatgaCTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGct                                                                               >  1:953649/1‑99 (MQ=255)

                     atgaCTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGctc                                                                              >  1:560855/1‑99 (MQ=255)

                     atgaCTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGctc                                                                              >  1:3068581/1‑99 (MQ=255)

                     atgaCTCATGATGAACCCTGTTCAGTGGCTCGAGCTGACAAACACGATCTCTTATAAGGGACCTGGTCGCACCTACCATAGAAAACAACAATTTTGctc                                                                              >  2:869399/1‑99 (MQ=2)

                       gaCTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGctctc                                                                            >  1:3257674/1‑99 (MQ=255)

                        aCTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGctctct                                                                           >  1:2214739/1‑99 (MQ=255)

                          tCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCg                                                                         >  1:2104427/1‑99 (MQ=255)

                          tCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCg                                                                         >  2:1946499/1‑99 (MQ=255)

                          tCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCg                                                                         >  1:3590717/1‑99 (MQ=255)

                          tCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCg                                                                         >  1:2333338/1‑99 (MQ=255)

                          tCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCg                                                                         <  1:2390583/99‑1 (MQ=255)

                           cATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCgg                                                                        <  1:1017591/99‑1 (MQ=255)

                            attatgaACCCTGTGCTATGGCTCCAGATTACTAACATGGTCTCGTATCAGCGACTTGTTCGCACTTTCCCGAGAACACCACAATTTCCCTCTCTCGGt                                                                       <  2:1241596/96‑1 (MQ=255)

                            atgatgAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACTACAATTTCGCTCTCTCGGt                                                                       >  2:3823557/1‑99 (MQ=255)

                              gatgaACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTaa                                                                     <  1:4093982/99‑1 (MQ=255)

                              gatgaACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTaa                                                                     <  1:295716/99‑1 (MQ=255)

                               atgaACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAg                                                                    >  1:1825025/1‑99 (MQ=255)

                                tgaACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAgg                                                                   <  1:3563748/99‑1 (MQ=255)

                                  aaCCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCa                                                                 >  2:3113399/1‑99 (MQ=255)

                                   actcTGTTCCATGGTTCTAGATGACATACATGATTTCATATTAGTGACTTGTTTGCACCTTCATTAGAACATCATAATTTCGTTCTCTCGGTAAGGCAc                                                                <  2:3237149/96‑1 (MQ=255)

                                    cccTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACt                                                               >  2:924258/1‑99 (MQ=255)

                                     ccTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTg                                                              >  2:3403725/1‑99 (MQ=255)

                                        gTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTca                                                           >  1:1339995/1‑99 (MQ=255)

                                        gTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTca                                                           >  2:4103509/1‑99 (MQ=255)

                                          tCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTcaca                                                         >  2:1068988/1‑99 (MQ=255)

                                           ccATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAg                                                        <  1:3293512/99‑1 (MQ=255)

                                            cATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGc                                                       >  2:3046360/1‑99 (MQ=255)

                                             aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCa                                                      <  2:331628/99‑1 (MQ=255)

                                             aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCa                                                      <  2:2022121/99‑1 (MQ=255)

                                             aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCa                                                      >  2:3008991/1‑99 (MQ=255)

                                               ggCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCAtt                                                    <  1:2772796/99‑1 (MQ=255)

                                               ggCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCAtt                                                    >  2:1068752/1‑99 (MQ=255)

                                               ggCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCAtt                                                    >  2:1710452/1‑99 (MQ=255)

                                                gCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTc                                                   >  2:35650/1‑99 (MQ=255)

                                                  tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCaa                                                 <  1:2445479/99‑1 (MQ=255)

                                                    cAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACa                                               >  2:1386776/1‑99 (MQ=255)

                                                    cAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACa                                               >  1:3028841/1‑99 (MQ=255)

                                                       aTGACAAACATGATCTCATATCAGTGACTTTTCAGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGaa                                            <  2:1656677/99‑1 (MQ=38)

                                                         gaaaaaCATGATCTCATATTAGGGAATTGTTAGCACCTTCCCTAGAACATCACATTTTCGTTTTCTCGGTTAGTCACGGCCACAACATTCAACCGCAtg                                          >  2:69202/4‑99 (MQ=16)

                                                          aCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAAtgt                                         <  2:3730584/99‑1 (MQ=255)

                                                            aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGa                                       <  1:3460054/99‑1 (MQ=255)

                                                             aaCATGATCTCATATCAGGGACTTGTTCACACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGAc                                      >  1:3153990/1‑99 (MQ=255)

                                                              aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACt                                     <  2:845357/99‑1 (MQ=255)

                                                               cATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACtt                                    <  1:3592720/99‑1 (MQ=255)

                                                                aTGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTg                                   <  1:3537081/99‑1 (MQ=255)

                                                                  taTCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGcc                                 <  2:3475779/98‑1 (MQ=255)

                                                                   aTCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCa                                <  1:2168578/99‑1 (MQ=255)

                                                                      tcATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGAt                             >  1:2524194/1‑99 (MQ=255)

                                                                      tcATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGAt                             >  2:1363162/1‑99 (MQ=255)

                                                                       cATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGAtt                            >  2:599475/1‑99 (MQ=255)

                                                                       cATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGAtt                            >  1:3810392/1‑99 (MQ=255)

                                                                         tatCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTGCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATtta                          <  1:3436299/99‑1 (MQ=255)

                                                                          atCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATttat                         <  1:3313507/99‑1 (MQ=255)

                                                                          atCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATttat                         <  2:465096/99‑1 (MQ=255)

                                                                          atCAGGGACTTGATCGCACCTGCCCTAGAACACCTCAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATttat                         <  2:1454701/99‑1 (MQ=255)

                                                                           tCAGGGACTTGTTCGCACCTTCCCTAGAACACCACCATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATttatt                        <  1:421333/99‑1 (MQ=255)

                                                                           tCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATttatt                        <  1:885289/99‑1 (MQ=255)

                                                                             aGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAg                      >  1:3926205/1‑99 (MQ=255)

                                                                             aGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAg                      >  2:2285800/1‑99 (MQ=255)

                                                                             aGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGAGACTTGCCAGATTTATTAg                      <  1:3387183/99‑1 (MQ=255)

                                                                             aGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCGCGGTAAGGCACTGCCACCGCATTCAACAGAATGTGACTTGCCAGATTTATTAg                      <  2:4012170/99‑1 (MQ=255)

                                                                              gggACTTGTTCGCACCTTCCCTAGAACAACACAATTTCGCTCTCTCGGTAACGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAgc                     <  2:1506107/99‑1 (MQ=255)

                                                                              gggACTTGTTCGCACCTTCCCGAGAACTCCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAgc                     <  2:3332181/99‑1 (MQ=255)

                                                                                gACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAgcgc                   <  1:2031777/99‑1 (MQ=255)

                                                                                   ttGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGccac                >  1:846783/1‑99 (MQ=255)

                                                                                   ttGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGccac                >  2:2263510/1‑99 (MQ=255)

                                                                                    tGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGccacc               <  1:2208878/99‑1 (MQ=255)

                                                                                     ggtCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGccacca              <  2:2230665/97‑1 (MQ=255)

                                                                                     gTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGccacca              >  1:1383595/1‑99 (MQ=255)

                                                                                      ttCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGCCTTGCCAGATTTATTAGCGCCACCAg             >  2:2608724/1‑99 (MQ=255)

                                                                                      ttCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAg             >  1:912970/1‑99 (MQ=255)

                                                                                      ttCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAg             >  1:1710357/1‑99 (MQ=255)

                                                                                          cACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGt         <  1:124928/99‑1 (MQ=255)

                                                                                          cACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGt         <  1:3134325/99‑1 (MQ=255)

                                                                                          cACCTTCCCTAGAACACCACAAGTCCGCGCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGt         <  2:528195/99‑1 (MQ=255)

                                                                                                cccTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAAcc   >  2:2490000/1‑99 (MQ=255)

                                                                                                 ccTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCg  >  2:607694/1‑99 (MQ=255)

ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCG  >  NC_000913/2067256‑2067451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.