New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1697979	65 (0.720)	4 (0.050)	3/346	6.2	6.1%	coding (62/768 nt)	hdhA	7‑alpha‑hydroxysteroid dehydrogenase, NAD‑dependent
	?	NC_000913	= 1698127	60 (0.690)					intergenic (‑87/+25)	hdhA/malI	7‑alpha‑hydroxysteroid dehydrogenase, NAD‑dependent/transcriptional repressor of Mal regulon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCGTCGGCGTTAATATCACTGACCACCACAGATGCGCCAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACT  >  NC_000913/1697900‑1698362                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                            gccGTCGGCTTTAATACCACTGCCCACCACAGATGCGCAAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATCCCTGCCCCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGTTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCATTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAg                                                                                                                                                                                                                                    <  2:58039/235‑1 (MQ=255)  gCGTCGGCGTTAATATCACTGACCACCACAGATGCGCCAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCGGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAg                                                                                                                                                                                                                                 >  1:333045/1‑239 (MQ=255)                                     gcCAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCcggg                                                                                                                                                                                              <  1:923607/239‑1 (MQ=255)                                      ccAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATCCCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGatta                                                                                                                                                                                                                  <  2:1128898/218‑1 (MQ=255)                                      ccAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGatta                                                                                                                                                                                                                  >  1:1128898/1‑218 (MQ=255)                                           tGTCGGGAAGTTAATGGCGATTTCTTTACCAATACCGGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCcgggcggg                                                                                                                                                                                          <  2:478458/237‑1 (MQ=255)                                                   aTGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCGGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGa                                                                                                                                                                                <  2:333045/239‑1 (MQ=255)                                                                ttCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCg                                                                                                                                                                                                             >  1:419030/1‑197 (MQ=255)                                                                ttCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCg                                                                                                                                                                                                             <  2:419030/197‑1 (MQ=255)                                                                 tttttCCCAATACCTCCCCCCGCCCCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGATCTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTAcc                                                                                                                                                                                                                                            <  2:244824/163‑1 (MQ=255)                                                                         aaTACCTGCACCCGCACCTGTAATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCAt                                                                                                                                                          <  1:747774/239‑1 (MQ=255)                                                                           tACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCa                                                                                                                                                                                                                                  >  1:244824/1‑165 (MQ=255)                                                                                      gCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAg                                                                                                                                                                                                                                    >  1:734010/1‑152 (MQ=255)                                                                                      gCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAg                                                                                                                                                                                                                                    <  2:734010/152‑1 (MQ=255)                                                                                      gCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCcggg                                                                                                                                                                                              <  2:604358/190‑1 (MQ=255)                                                                                      gCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCcggg                                                                                                                                                                                              >  1:604358/1‑190 (MQ=255)                                                                                      gCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGAtttttg                                                                                                                                              >  2:640782/1‑237 (MQ=255)                                                                                       cACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGatta                                                                                                                                                                                                                  <  2:491911/169‑1 (MQ=255)                                                                                       cACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGatta                                                                                                                                                                                                                  >  1:491911/1‑169 (MQ=255)                                                                                        aCCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAg                                                                                                                                                                                                                                    <  2:623629/150‑1 (MQ=255)                                                                                        aCCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAg                                                                                                                                                                                                                                    >  1:623629/1‑150 (MQ=255)                                                                                           tgtgATGATGGCGCTTTTCCCGTCGAGTCTCAGGTTTACAAAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCGCCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGcatca                                                                                                                                        <  2:384970/239‑1 (MQ=255)                                                                                           tgtgATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGcatca                                                                                                                                        >  1:808166/1‑239 (MQ=255)                                                                                                  atgGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGGGATTTTTTGCATCATGCGAt                                                                                                                                  >  1:873744/1‑238 (MQ=255)                                                                                                    ggCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCcgggcg                                                                                                                                                                                            >  1:1175332/1‑178 (MQ=255)                                                                                                    ggCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCcgggcg                                                                                                                                                                                            <  2:1175332/178‑1 (MQ=255)                                                                                                    ggCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATcc                                                                                                                                >  1:788901/1‑238 (MQ=255)                                                                                                    ggCGCATTTTCCGTCGAGTCTCAGGTTGGCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCAACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATAATGCGATCCg                                                                                                                               >  2:596569/1‑239 (MQ=255)                                                                                                      cgcATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAg                                                                                                                                                                                                                                    >  1:32409/1‑136 (MQ=255)                                                                                                       gcATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCaa                                                                                                                            <  2:219174/239‑1 (MQ=255)                                                                                                                                          acacATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGcc                                                                                         <  2:808166/239‑1 (MQ=255)                                                                                                                                                  aCCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTc                                                                                                            <  2:540362/212‑1 (MQ=255)                                                                                                                                                  aCCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTc                                                                                                            >  1:540362/1‑212 (MQ=255)                                                                                                                                                       ctGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGta                                                                            <  1:289353/239‑1 (MQ=255)                                                                                                                                                        tgtgAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTAcc                                                                                                                                                                                                                                            <  2:16234/78‑1 (MQ=255)                                                                                                                                                        tgtgAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTAcc                                                                                                                                                                                                                                            >  1:16234/1‑78 (MQ=255)                                                                                                                                                        tgtgAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGc                                                                                                                              >  2:242212/1‑188 (MQ=255)                                                                                                                                                        tgtgAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGc                                                                                                                              <  1:242212/188‑1 (MQ=255)                                                                                                                                                        tgtgAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGtat                                                                           >  1:930304/1‑239 (MQ=255)                                                                                                                                                        tgtgAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGtat                                                                           >  2:1138514/1‑239 (MQ=255)                                                                                                                                                               ttaaGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATAtcatca                                                                    <  2:788901/236‑1 (MQ=255)                                                                                                                                                               ttCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGtat                                                                           <  1:395611/232‑1 (MQ=255)                                                                                                                                                               ttCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGtat                                                                           >  2:395611/1‑232 (MQ=255)                                                                                                                                                                 cAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCcgggcggg                                                                                                                                                                                          >  1:480421/1‑119 (MQ=255)                                                                                                                                                                 cAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCcgggcggg                                                                                                                                                                                          <  2:480421/119‑1 (MQ=255)                                                                                                                                                                 cAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATatcat                                                                      >  2:595793/1‑235 (MQ=255)                                                                                                                                                                 cAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAg                                                                  >  2:188306/1‑239 (MQ=255)                                                                                                                                                                 cAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGCATATCATCAAg                                                                  >  1:141776/1‑239 (MQ=255)                                                                                                                                                                     aaaaaTAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAgt                                                                 <  1:116823/236‑1 (MQ=255)                                                                                                                                                                                  aCCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCACGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCa                                                  >  1:896371/1‑238 (MQ=255)                                                                                                                                                                                  aCCGCCTGTGTGACACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCAt                                                 >  2:842440/1‑239 (MQ=255)                                                                                                                                                                                          tgtgCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGt                                                                                                                                                                  >  2:351674/1‑118 (MQ=255)                                                                                                                                                                                          tgtgCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGt                                                                                                                                                                  <  1:351674/118‑1 (MQ=255)                                                                                                                                                                                               cacaTTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATgccg                                     <  1:640782/238‑1 (MQ=255)                                                                                                                                                                                                 caTTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCa                                  >  2:803793/1‑239 (MQ=255)                                                                                                                                                                                                                    tGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTgg                                                                                                   <  2:504165/155‑1 (MQ=255)                                                                                                                                                                                                                    tGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTgg                                                                                                   >  1:504165/1‑155 (MQ=255)                                                                                                                                                                                                                      aGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTg                                                                                               >  1:704050/1‑157 (MQ=255)                                                                                                                                                                                                                      aGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTg                                                                                               <  2:704050/157‑1 (MQ=255)                                                                                                                                                                                                                      aGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGt             >  1:957031/1‑239 (MQ=255)                                                                                                                                                                                                                      aGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGt             >  1:856476/1‑239 (MQ=255)                                                                                                                                                                                                                              acccTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACg         <  2:551978/232‑1 (MQ=255)                                                                                                                                                                                                                                  tACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACt  >  1:595209/1‑238 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                            TGCGTCGGCGTTAATATCACTGACCACCACAGATGCGCCAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCGAGTCTCAGGTTGTCAGAATTAAACACATAAACCTCCTGTGAACTTCAGTAAAAATAAAAGGCACCGCCTGTGTGCCACATTTTTTATCATTAACCTTGAGGAAAGGACACTACCAGGTATAGCAGATAAAGAGAGGATTATTTCGCTGCAATGAGCCGGGCGGGAATAATAAGATTGCGTGAATGCGTCTCTTCATGGGTGATTTTTTGCATCATGCGATCCGCAAGTGTGATACCAAGTTCCCGCGCTGGCGTGCTGGCCCAGGTAACAGGTATATCATCAAGTGTGGTTGGTGTCGCATCGGTAAATGCCGCCAGCGAAACCTGTTGCTCAAAGTAACGATCGACT  >  NC_000913/1697900‑1698362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.