New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2478355	34 (0.820)	5 (0.130)	5/260	3.7	12.9%	coding (509/1338 nt)	dsdX	D‑serine transporter
	?	NC_000913	= 2478636	36 (0.940)					coding (790/1338 nt)	dsdX	D‑serine transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGCTGATGGCATCACTGATCGGTGGCCCACTTTTCCTTAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTATTGCTAATATTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGTCTCGCTGATACGC  >  NC_000913/2478402‑2478837                                                                                                                                                                                                                                           |                                                                                                                                                                                                          gggCTGATGGCATCACTGATCGGTGGCCCACTTTTCCTTAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTAt                                                                                                                                                                                                       >  3:95321/1‑239 (MQ=255)               aCTGATCGGTGGCCCACTTTTCCTTAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCa                                                                                                                                                                                         <  4:95321/239‑1 (MQ=255)                                    ccTTAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCgtgt                                                                                                                                                                    >  1:27359/1‑239 (MQ=255)                                      ttAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGttt                                                                                                                                                                  <  2:27359/239‑1 (MQ=255)                                       tAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCgtg                                                                                                                                                                     >  3:84029/1‑235 (MQ=255)                                        aaaTTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGt                                                                                                                                                                <  1:62302/239‑1 (MQ=255)                                                       cGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGtt                                                                                                                                                 <  4:155016/239‑1 (MQ=255)                                                           tGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGt                                                                                                                                             >  3:351101/1‑239 (MQ=255)                                                                 ttAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCtat                                                                                                                                                         <  2:118356/221‑1 (MQ=255)                                                                 ttAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCtat                                                                                                                                                         >  1:118356/1‑221 (MQ=255)                                                                 taaaaCCTAGACCCAGAACGTTTACTGTTCTCAAAGTTCGCGATTAAATAACACTACCGTCATTAGGCGCAACGTTTTTCAGCATACTGCTACCGGTGGCGTCGATGTTGGTTAAAACGTTTGCGGAATTGAATATGGCGCGTGGGAGTGGTTTGTATATCTTGGTTGATTTTATTGGAATCCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGc                                                                                                                                       <  2:195229/237‑1 (MQ=255)                                                                         gTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGGGTTTGTCGCCTATTATGTGTTGGGTATAGGCCAGCatat                                                                                                                               >  3:226948/1‑239 (MQ=255)                                                                                                       cgcgATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGa                                                                                                 >  1:95744/1‑239 (MQ=255)                                                                                                               aaaaaCACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGc                                                                                          <  3:411053/238‑1 (MQ=255)                                                                                                                      cTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTc                                                                                  <  2:95744/239‑1 (MQ=255)                                                                                                                       tACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCt                                                                                 <  4:84029/239‑1 (MQ=255)                                                                                                                              aTTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCtat                                                                                                                                                         <  4:492367/160‑1 (MQ=255)                                                                                                                              aTTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCtat                                                                                                                                                         >  3:492367/1‑160 (MQ=255)                                                                                                                                    cgcAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTATTGCTAATAttt                                                                    >  3:310737/1‑239 (MQ=255)                                                                                                                                       aaCGTTCTTCACCATACTGCTTCCCATTGCGCTGATTTTGGTTAAAACGATTGCCTAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGATTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGtt                                                                                                                                                 <  2:167236/159‑1 (MQ=255)                                                                                                                                                 aCCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGc                                                                                                                                       >  1:167236/1‑159 (MQ=255)                                                                                                                                                   cATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTAtgtg                                                                                                                                                   >  3:477303/1‑145 (MQ=255)                                                                                                                                                   cATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTAtgtg                                                                                                                                                   <  4:477303/145‑1 (MQ=255)                                                                                                                                                                                       gtttGCCAAATTGAATATGGCCCGTGAGATTGGTTTGTATATCTTGGTTGATTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTATTGCTAATATTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAgcagca                 <  4:226948/237‑1 (MQ=255)                                                                                                                                                                                          tGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTAt                                                                                                                                                                                           >  4:320629/1‑66 (MQ=255)                                                                                                                                                                                          tGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTAt                                                                                                                                                                                           <  3:320629/66‑1 (MQ=255)                                                                                                                                                                                                      tatGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTATTGCTAATATTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGTCTCGCTGATAAGc  >  1:131282/1‑239 (MQ=255)                                                                                                                                                                                                         ggCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCa                                                                                                                                     >  4:434242/1‑105 (MQ=255)                                                                                                                                                                                                         ggCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCa                                                                                                                                     <  3:434242/105‑1 (MQ=255)                                                                                                                                                                                                              gTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGta                                                                                                                                            <  4:260082/93‑1 (MQ=255)                                                                                                                                                                                                              gTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGta                                                                                                                                            >  3:260082/1‑93 (MQ=255)                                                                                                                                                                                                              gTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTAt                                                                               <  3:61707/154‑1 (MQ=255)                                                                                                                                                                                                              gTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTAt                                                                               >  4:61707/1‑154 (MQ=255)                                                                                                                                                                                                                                 cTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGtt                                                                                                                                                 >  4:146995/1‑69 (MQ=255)                                                                                                                                                                                                                                 cTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGtt                                                                                                                                                 <  3:146995/69‑1 (MQ=255)                                                                                                                                                                                                                                    ggTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACg                                                                                                                  <  1:182582/97‑1 (MQ=255)                                                                                                                                                                                                                                    ggTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACg                                                                                                                  >  2:182582/1‑97 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                          GGGCTGATGGCATCACTGATCGGTGGCCCACTTTTCCTTAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTATTGCTAATATTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGTCTCGCTGATACGC  >  NC_000913/2478402‑2478837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.