BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2204457	152 (0.940)	21 (0.150)	14/174	13.8	13.2%	intergenic (+168/‑139)	yehK/yehL	uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
*	?	NC_000913	= 2204480	142 (0.990)	21 (0.150)	14/174	13.8	13.2%	intergenic (+191/‑116)	yehK/yehL	uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 155 total aligned reads displayed.

TATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTA  >  NC_000913/2204359‑2204554

tATCTTAATTGCAACGGGGTCCAGCTGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATaaaa                                                                                                   <  2:2011386/99‑1 (MQ=255)

  tCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGa                                                                                                 <  1:2088592/99‑1 (MQ=255)

   cTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGaa                                                                                                >  2:3923066/1‑99 (MQ=255)

    ttAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAAc                                                                                               <  1:3989676/99‑1 (MQ=255)

    ttAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAAc                                                                                               >  2:3175200/1‑99 (MQ=255)

    ttAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAAc                                                                                               >  1:1762370/1‑99 (MQ=255)

    ttAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAAc                                                                                               >  1:19395/1‑99 (MQ=255)

        ttGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGc                                                                                           <  1:293040/99‑1 (MQ=255)

        ttGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGc                                                                                           >  1:2333269/1‑99 (MQ=255)

        ttGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGc                                                                                           >  1:1921298/1‑99 (MQ=255)

            aaCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCa                                                                                       >  1:2615211/1‑99 (MQ=255)

            aaCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCa                                                                                       >  2:1590684/1‑99 (MQ=255)

             aCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCAc                                                                                      >  1:385217/1‑99 (MQ=255)

             aCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCAc                                                                                      >  1:384973/1‑99 (MQ=255)

             aCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCAc                                                                                      <  2:3770978/99‑1 (MQ=255)

             aCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCAc                                                                                      >  1:973610/1‑99 (MQ=255)

             aCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCAc                                                                                      <  1:815678/99‑1 (MQ=255)

             aCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCAc                                                                                      <  1:817046/99‑1 (MQ=255)

              cGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCAcc                                                                                     <  2:3106544/99‑1 (MQ=255)

                gggTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACcag                                                                                   >  1:4076179/1‑99 (MQ=255)

                  gTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACcagct                                                                                 >  1:4132570/1‑98 (MQ=255)

                  gTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACcagca                                                                                 <  2:1956820/99‑1 (MQ=255)

                   tCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACcagcag                                                                                >  2:3106486/1‑99 (MQ=255)

                     cAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAgga                                                                              >  2:85005/1‑98 (MQ=255)

                      aGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtt                                                                             <  2:2088965/99‑1 (MQ=255)

                       gCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt                                                                            <  2:43125/99‑1 (MQ=255)

                       gCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt                                                                            <  1:3718568/99‑1 (MQ=255)

                       gCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt                                                                            <  2:1575105/99‑1 (MQ=255)

                         cGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttt                                                                          <  2:1220225/99‑1 (MQ=255)

                          gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                         <  2:2652814/99‑1 (MQ=255)

                          gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                         <  2:2812201/99‑1 (MQ=255)

                          gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                         <  2:37274/99‑1 (MQ=255)

                          gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                         <  1:3082601/99‑1 (MQ=255)

                          gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                         >  2:2604606/1‑99 (MQ=255)

                           tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttttt                                                                        <  2:2361481/99‑1 (MQ=255)

                            ggTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTttta                                                                       <  1:4061580/99‑1 (MQ=255)

                              ttATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGCGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttatt                                                                     >  1:3188503/1‑99 (MQ=255)

                              ttATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTATGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTACCTCACCAGCAGGCTTTtttatt                                                                     >  1:3603727/1‑99 (MQ=255)

                                ataATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttattta                                                                   <  1:2956428/99‑1 (MQ=255)

                                 taATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTAc                                                                  >  1:19048/1‑99 (MQ=255)

                                   aTTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTCAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtg                                                                >  2:1094062/1‑99 (MQ=255)

                                    ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtgt                                                               <  2:2659587/99‑1 (MQ=255)

                                     tcgttcgtTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtgtg                                                              <  1:325963/99‑1 (MQ=255)

                                       gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGAt                                                            <  1:1331941/99‑1 (MQ=255)

                                       gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGAt                                                            >  2:1509509/1‑99 (MQ=255)

                                        ttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATc                                                           <  1:1086529/99‑1 (MQ=255)

                                           gttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGc                                                        >  1:2435906/1‑99 (MQ=255)

                                             tGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCtt                                                      >  1:681931/1‑99 (MQ=255)

                                             gggAAGACGATGTTGCACAGGGTGTGGTGTGAGGCATGAAAGTAGTAAATAGAAGTACCGGCCTCACAAGCAGGTTTTTTTATTTACTGTGATCTGCtt                                                      <  2:386406/98‑1 (MQ=255)

                                              ggAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCttt                                                     <  1:609431/99‑1 (MQ=255)

                                              ggAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCttt                                                     >  1:2831302/1‑99 (MQ=255)

                                                 acacGATGTTGCACCGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                  >  2:3090132/1‑99 (MQ=255)

                                                 acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                  >  1:1331762/1‑99 (MQ=255)

                                                 acacGATGTTGCACAGGCTCTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                  <  2:3621544/99‑1 (MQ=255)

                                                  cacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAAACTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                 >  2:3633231/1‑99 (MQ=255)

                                                         ttGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAtttt                                          <  2:3553725/99‑1 (MQ=255)

                                                          tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAttttt                                         <  2:1556609/99‑1 (MQ=255)

                                                           gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                        >  2:287267/1‑99 (MQ=255)

                                                           gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                        >  2:1784978/1‑99 (MQ=255)

                                                           gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                        <  2:211696/99‑1 (MQ=255)

                                                           gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                        >  2:3353316/1‑99 (MQ=255)

                                                            cacaGGCTGTCGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCg                                       <  2:3070283/99‑1 (MQ=255)

                                                             acaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                      >  1:2233739/1‑99 (MQ=255)

                                                             acaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                      >  2:2775123/1‑99 (MQ=255)

                                                             acaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                      >  1:1289372/1‑99 (MQ=255)

                                                              caGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCt                                     <  1:1956410/99‑1 (MQ=255)

                                                                 gCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCaa                                  >  1:1131066/1‑99 (MQ=255)

                                                                  cTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCaaa                                 <  1:2782510/99‑1 (MQ=255)

                                                                    gtggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaaca                               >  2:1033046/1‑99 (MQ=255)

                                                                     ttgtgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaa                              >  1:883710/3‑99 (MQ=255)

                                                                     tggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaa                              <  2:1768676/99‑1 (MQ=255)

                                                                     tggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaa                              <  1:3558933/99‑1 (MQ=255)

                                                                      ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTATGATCTGCTTTCCAGATATTTTTCGCTCAaacaac                             >  2:4000983/1‑99 (MQ=255)

                                                                        tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTa                           >  1:479535/1‑99 (MQ=255)

                                                                         gtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTaa                          >  2:2556582/1‑99 (MQ=255)

                                                                           tAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg                        <  1:2705471/99‑1 (MQ=255)

                                                                            aGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                       <  1:3607340/99‑1 (MQ=255)

                                                                             ggCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcg                      <  1:1838178/99‑1 (MQ=255)

                                                                                cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCa                   >  1:3567808/1‑99 (MQ=255)

                                                                                cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCa                   >  1:3351633/1‑99 (MQ=255)

                                                                                 tGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCaa                  >  1:1736964/1‑99 (MQ=255)

                                                                                    aaaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACa               >  1:2753615/1‑99 (MQ=255)

                                                                                     aaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAt              <  1:2899158/99‑1 (MQ=255)

                                                                                     aaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAt              <  2:708835/99‑1 (MQ=255)

                                                                                        aGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTa           <  1:3024482/99‑1 (MQ=255)

                                                                                        aGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTa           >  1:1818484/1‑99 (MQ=255)

                                                                                         gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt          >  2:748800/1‑99 (MQ=255)

                                                                                         gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt          <  1:1250796/99‑1 (MQ=255)

                                                                                         gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt          >  1:2533608/1‑99 (MQ=255)

                                                                                         gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt          <  1:3991143/99‑1 (MQ=255)

                                                                                            aataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc       <  2:3532485/99‑1 (MQ=255)

                                                                                            aataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc       <  2:665554/99‑1 (MQ=255)

                                                                                            aataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc       <  2:1316683/99‑1 (MQ=255)

                                                                                             ataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcg      >  1:3181143/1‑99 (MQ=255)

                                                                                              taaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc     <  1:2277653/99‑1 (MQ=255)

                                                                                               aaaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg    >  1:2309865/1‑99 (MQ=255)

                                                                                               aaaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg    >  2:123571/1‑99 (MQ=255)

                                                                                                 aaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa  >  2:3904340/1‑99 (MQ=255)

                                                                                                 aaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa  >  1:730717/1‑99 (MQ=255)

                                                                                                 aaGAACCTGCCTCACCAGCAGGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa  >  2:674454/1‑99 (MQ=255)

TATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTA  >  NC_000913/2204359‑2204554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.