New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2204457152 (0.940)21 (0.150) 14/174 13.8 13.2% intergenic (+168/‑139) yehK/yehL uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
?NC_000913 = 2204480 142 (0.990)intergenic (+191/‑116) yehK/yehL uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 162 total aligned reads displayed.

GCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATAC  >  NC_000913/2204382‑2204578
                                                                                                  |                                                                                                  
gCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt                                                                                                    <  2:43125/99‑1 (MQ=255)
gCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt                                                                                                    <  2:1575105/99‑1 (MQ=255)
  cGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttt                                                                                                  <  2:1220225/99‑1 (MQ=255)
   gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                                                 <  2:2652814/99‑1 (MQ=255)
   gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                                                 >  2:2604606/1‑99 (MQ=255)
   gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                                                 <  2:2812201/99‑1 (MQ=255)
   gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                                                 <  1:3082601/99‑1 (MQ=255)
   gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                                                 <  2:37274/99‑1 (MQ=255)
    tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttttt                                                                                                <  2:2361481/99‑1 (MQ=255)
    tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttttt                                                                                                <  2:1936990/99‑1 (MQ=255)
     ggTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTttta                                                                                               <  1:4061580/99‑1 (MQ=255)
     caatataATTCGTTCGTGGCAGCACGATGTTGCACAGGCTGCGGTGTTAGACCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTttta                                                                                               <  2:707859/96‑1 (MQ=255)
       ttATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttatt                                                                                             <  2:2062664/99‑1 (MQ=255)
       ttATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGCGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttatt                                                                                             >  1:3188503/1‑99 (MQ=255)
       ttATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTATGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTACCTCACCAGCAGGCTTTtttatt                                                                                             >  1:3603727/1‑99 (MQ=255)
         ataATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttattta                                                                                           <  1:2956428/99‑1 (MQ=255)
          taATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTAc                                                                                          >  1:19048/1‑99 (MQ=255)
            aTTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTCAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtg                                                                                        >  2:1094062/1‑99 (MQ=255)
             ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtgt                                                                                       >  1:3591058/1‑99 (MQ=255)
             ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtgt                                                                                       <  2:2659587/99‑1 (MQ=255)
                gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGAt                                                                                    <  1:1331941/99‑1 (MQ=255)
                gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGAt                                                                                    >  2:1509509/1‑99 (MQ=255)
                 ttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATc                                                                                   <  1:1086529/99‑1 (MQ=255)
                    gttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGG‑TTTTTTATTTACTGTGATCTGCt                                                                               >  2:1334144/1‑99 (MQ=255)
                    gttGGAACACGATGTTGCACAGGCTGTCGTGTAAGGCCTGAAAATAGTAAATAAAAGAGCCTGCCTCACCGGCAGGTTTCTGTATTTACTGTGATCGGc                                                                                <  2:2767608/99‑1 (MQ=255)
                      tGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCtt                                                                              >  1:681931/1‑99 (MQ=255)
                       ggAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCttt                                                                             <  1:609431/99‑1 (MQ=255)
                       ggAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCttt                                                                             >  1:2831302/1‑99 (MQ=255)
                        gAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTc                                                                            >  2:889203/1‑99 (MQ=255)
                         aaCACGATGTTGCAGAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTcc                                                                           >  2:3079654/1‑99 (MQ=255)
                          acacGATGTTGCACCGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                                          >  2:3090132/1‑99 (MQ=255)
                          acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                                          >  1:1331762/1‑99 (MQ=255)
                          acacGATGTTGCACAGGCTCTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                                          <  2:3621544/99‑1 (MQ=255)
                              gATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGata                                                                      <  1:1945468/99‑1 (MQ=255)
                                  ttGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAtttt                                                                  <  2:3553725/99‑1 (MQ=255)
                                  ttGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAtttt                                                                  <  2:2255018/99‑1 (MQ=255)
                                   tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAttttt                                                                 <  2:3596844/99‑1 (MQ=255)
                                   tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAttttt                                                                 <  1:2758612/99‑1 (MQ=255)
                                    gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                                                >  2:1784978/1‑99 (MQ=255)
                                    gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                                                >  2:156099/1‑99 (MQ=255)
                                    gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                                                >  2:287267/1‑99 (MQ=255)
                                    gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                                                <  1:4028949/99‑1 (MQ=255)
                                     cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCg                                                               <  1:2518159/99‑1 (MQ=255)
                                      acaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                                              >  1:2233739/1‑99 (MQ=255)
                                      acaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                                              >  1:1289372/1‑99 (MQ=255)
                                          gCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCaa                                                          >  1:1131066/1‑99 (MQ=255)
                                            tgtgGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                                        <  1:2369074/99‑1 (MQ=255)
                                              ttgtgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaa                                                      >  1:883710/3‑99 (MQ=255)
                                              tggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaa                                                      <  2:1768676/99‑1 (MQ=255)
                                              tggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaa                                                      <  1:3558933/99‑1 (MQ=255)
                                               ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGGTATTTTTCGCTCAaacaac                                                     <  1:3223523/99‑1 (MQ=255)
                                                 tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTa                                                   >  1:479535/1‑99 (MQ=255)
                                                  gtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTaa                                                  >  2:2535859/1‑99 (MQ=255)
                                                    tAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg                                                <  1:2705471/99‑1 (MQ=255)
                                                      ggCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcg                                              <  1:1838178/99‑1 (MQ=255)
                                                         cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCa                                           >  1:3351633/1‑99 (MQ=255)
                                                         cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCa                                           >  2:3941322/1‑99 (MQ=255)
                                                         cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCa                                           <  1:3669372/99‑1 (MQ=255)
                                                          tGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCaa                                          >  1:1736964/1‑99 (MQ=255)
                                                          tGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCaa                                          >  1:3725389/1‑99 (MQ=255)
                                                             aaaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACa                                       >  1:2753615/1‑99 (MQ=255)
                                                             aaaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACa                                       >  1:2100772/1‑99 (MQ=255)
                                                              aaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAt                                      <  1:2899158/99‑1 (MQ=255)
                                                                 aGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTa                                   <  1:3024482/99‑1 (MQ=255)
                                                                  gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTTATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt                                  >  2:1024972/1‑99 (MQ=255)
                                                                  gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt                                  <  1:1250796/99‑1 (MQ=255)
                                                                  gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt                                  <  1:3991143/99‑1 (MQ=255)
                                                                      ataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcg                              >  1:230849/1‑99 (MQ=255)
                                                                       taaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc                             >  1:748870/1‑99 (MQ=255)
                                                                        aaaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                            >  2:3831886/1‑99 (MQ=255)
                                                                        aaaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                            >  2:123571/1‑99 (MQ=255)
                                                                        aaaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                            >  1:2309865/1‑99 (MQ=255)
                                                                          aaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa                          >  1:730717/1‑99 (MQ=255)
                                                                          aaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa                          >  2:3904340/1‑99 (MQ=255)
                                                                          aaGAACCTGCCTCACCAGCAGGGTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa                          >  2:674454/1‑99 (MQ=255)
                                                                              aCCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAat                      >  1:2466053/1‑99 (MQ=255)
                                                                                cTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAatat                    >  2:3662759/1‑99 (MQ=255)
                                                                                 tGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATc                   <  1:3408952/99‑1 (MQ=255)
                                                                                 tGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATc                   <  2:3652743/99‑1 (MQ=255)
                                                                                   ccgcACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGt                 >  2:79773/4‑99 (MQ=255)
                                                                                   ccTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGt                 <  1:508705/99‑1 (MQ=255)
                                                                                     tCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTTTCTTTTATAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGttt               >  2:401614/1‑99 (MQ=255)
                                                                                      cACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTa              <  1:3740980/99‑1 (MQ=255)
                                                                                      cACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTa              >  2:1374282/1‑99 (MQ=255)
                                                                                      cACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTa              <  2:722810/99‑1 (MQ=255)
                                                                                         cagcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAttt           >  1:1428029/1‑99 (MQ=255)
                                                                                         cagcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAttt           <  1:2708838/99‑1 (MQ=255)
                                                                                         cagcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAttt           >  2:162241/1‑99 (MQ=255)
                                                                                         cagcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAttt           >  1:602436/1‑99 (MQ=255)
                                                                                          agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTc          <  1:2684607/99‑1 (MQ=255)
                                                                                          agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTc          <  2:2610022/99‑1 (MQ=255)
                                                                                          agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTc          <  1:1289785/99‑1 (MQ=255)
                                                                                          agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTc          <  1:412335/99‑1 (MQ=255)
                                                                                           gcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCa         <  1:1488627/99‑1 (MQ=255)
                                                                                            cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAt        <  2:3366186/99‑1 (MQ=255)
                                                                                            cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAt        <  2:1892263/99‑1 (MQ=255)
                                                                                             agGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt       <  1:2892987/99‑1 (MQ=255)
                                                                                              ggTTTTTTTATTTACTGTGATCTGCTTTCCATATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTa      <  2:3759634/99‑1 (MQ=255)
                                                                                               gTTTTTTTTTTTTTTTTTATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTaa     >  2:757438/1‑99 (MQ=255)
                                                                                               gTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTTCGCGTAAAATATCGTTTATTTCATTaa     >  2:536762/1‑99 (MQ=255)
                                                                                                  |                                                                                                  
GCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATAC  >  NC_000913/2204382‑2204578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.