| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,224,288 | IS5 (+) +4 bp | coding (580‑583/933 nt) | pbpG ← | D‑alanyl‑D‑alanine endopeptidase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 125 (0.790) | 76/194 | 1.2 | 99.2% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2224288 = | 1 (0.010) | coding (583/933 nt) | pbpG | D‑alanyl‑D‑alanine endopeptidase | |||||
| * | ? | NC_000913 | = 2224291 | 1 (0.010) | 236 (1.470) | 99/196 | 0.2 | 99.6% | coding (580/933 nt) | pbpG | D‑alanyl‑D‑alanine endopeptidase |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 372 total aligned reads displayed.
ATTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTCAACAA > NC_000913/2224193‑2224389 | tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTaa < 2:578864‑M2/4‑1 (MQ=255)atTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTaa < 2:2529838/99‑1 (MQ=255) tCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGGAGTACTTAAgg < 2:1722142‑M1/99‑3 (MQ=255) aaggcatttacgggagaacaaatcggctcaaacatgaagaaatgaaatgactgagtcatccgagaagactttccccgcttattcgcaccttccTTAACt > 2:1764180‑M2/94‑99 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTg > 2:484921‑M2/93‑99 (MQ=255) aGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaag > 1:78087‑M1/1‑94 (MQ=255) ttATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggt > 1:1228416‑M1/1‑92 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaactgactgagtcagacgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGa > 2:3909743‑M2/88‑99 (MQ=255) aTCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgc < 1:3696797‑M1/99‑10 (MQ=255) acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCa > 2:1183237‑M2/85‑99 (MQ=255) gcgATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGGTTAGAGAGGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaa < 1:2684084‑M1/99‑13 (MQ=255) gcgATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaa < 1:1267564‑M1/99‑13 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCaa < 2:2936381‑M2/16‑1 (MQ=255) gtgagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgtgaagactttccccgcttatttgccccttccTTAACTGCCCGATCAAc < 2:4036697‑M2/17‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAAc < 1:315030‑M2/17‑1 (MQ=255) acCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtcc > 2:3362374‑M1/1‑80 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGatat < 1:2261149‑M2/23‑1 (MQ=255) cAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccct > 2:2072846‑M1/1‑78 (MQ=255) aGATGCTTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccatt > 2:297177‑M1/1‑77 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGttt < 1:2091515‑M2/28‑1 (MQ=255) atgatTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgat > 1:495352‑M1/1‑75 (MQ=255) atTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCTGGTAGTACTTAAggaaggtgcgaacaagtccctgatatg > 2:3071574‑M1/1‑72 (MQ=255) atTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatg > 1:3712336‑M1/1‑72 (MQ=255) ttAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatga > 1:1427641‑M1/1‑71 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTgg < 1:820222‑M2/33‑1 (MQ=255) aGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgaga < 2:3134399‑M1/99‑31 (MQ=255) gTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagat > 2:1047126‑M1/1‑68 (MQ=255) gTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagat < 1:2187201‑M1/99‑32 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCa > 2:3476986‑M2/65‑99 (MQ=255) tATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatc > 1:1504662‑M1/1‑67 (MQ=255) tATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatc > 2:2284507‑M1/1‑67 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCaa > 1:899348‑M2/64‑99 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGa < 2:3050626‑M2/39‑1 (MQ=255) gCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgt < 2:1252713‑M1/99‑37 (MQ=255) gCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgt < 2:1652736‑M1/99‑37 (MQ=255) gCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgt > 2:3695271‑M1/1‑63 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt > 2:2325072‑M1/1‑62 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt < 2:2497407‑M1/99‑38 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt < 1:2576982‑M1/99‑38 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt > 1:3249821‑M1/1‑62 (MQ=255) ggAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:2012453‑M1/99‑39 (MQ=255) ggAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:284284‑M1/99‑39 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCa > 2:1335692‑M2/58‑99 (MQ=255) tgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTgg > 1:3510553‑M2/52‑99 (MQ=255) gCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc > 2:2346715‑M1/1‑55 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGt > 2:2619081‑M2/51‑99 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGtt > 1:2338927‑M2/50‑99 (MQ=255) aGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 2:3191530‑M1/99‑47 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTaa < 1:1359519‑M2/52‑1 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGt < 1:579699‑M2/54‑1 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTc > 2:1567270‑M2/45‑99 (MQ=255) gTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 2:2834929‑M1/1‑44 (MQ=255) gtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACggg > 1:2899744‑M2/40‑99 (MQ=255) gtcagccgaaaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACggg < 2:14870‑M2/60‑1 (MQ=255) cGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 1:3990616‑M1/99‑58 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAg > 1:3562738‑M2/37‑99 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGt < 2:3302901‑M2/64‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGtt > 2:377643‑M2/35‑99 (MQ=255) gagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGa > 1:2287956‑M2/33‑99 (MQ=255) gagaAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt > 2:892502‑M1/1‑35 (MQ=255) gaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGaaa < 2:772713‑M2/69‑1 (MQ=255) gaAGGTTGCCATATCTTCCCGGGTAGGACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:1782015‑M1/99‑67 (MQ=255) aagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAAc > 2:2415400‑M2/30‑99 (MQ=255) aaGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat > 1:2433470‑M1/1‑32 (MQ=255) gTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat < 1:3337301‑M1/99‑71 (MQ=255) tttccccgcttattcgcaccttccTTAACTGGCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTAt > 1:3668927‑M2/25‑99 (MQ=255) tGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:3752314‑M1/99‑73 (MQ=255) ccATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 1:1393323‑M1/1‑25 (MQ=255) ccATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 1:2207315‑M1/1‑25 (MQ=255) ccATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 2:385485‑M1/1‑25 (MQ=255) cATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 1:4050778‑M1/99‑76 (MQ=255) tatCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat > 1:2815279‑M1/1‑22 (MQ=255) gcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGa < 1:1041073‑M2/82‑1 (MQ=255) ttcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATc < 1:1159604‑M2/87‑1 (MQ=255) cccGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt < 2:1823752‑M1/99‑84 (MQ=255) cgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCg < 1:2464403‑M2/89‑1 (MQ=255) cGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 1:1937379‑M1/1‑14 (MQ=255) cGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 1:941489‑M1/99‑86 (MQ=255) caccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGt > 1:3105647‑M2/9‑99 (MQ=255) tagtaCTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 1:2509035‑M1/99‑90 (MQ=255) tagtaCTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc > 1:3418667‑M1/1‑10 (MQ=255) ttccTTAACAGCCCGATCAACGGATATTGTTTGGTGGCAATGAGCAGTTTGGCTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGt > 2:3742672‑M2/5‑99 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac < 1:1007801‑M1/99‑96 (MQ=255) ttAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTcaa > 1:636507/1‑99 (MQ=255) ttAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTcaa > 2:322993/1‑99 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 1:385882‑M1/99‑97 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 1:1694026‑M1/99‑97 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:2481691‑M1/99‑97 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:4122336‑M1/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:1016673‑M1/99‑97 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:2711845‑M1/99‑97 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:2183978‑M1/99‑97 (MQ=255) tAAggaaggtgcgaacaagtccctgacatgagatcatgtttgtcatctggagccatagaacagggctcatcatgagtcatcaactcaccttcgcggaca > 2:3348959‑M1/1‑3 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 2:3536245‑M1/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 1:70966‑M1/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 1:1862500‑M1/1‑2 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 1:2746813‑M1/99‑99 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 2:1121062‑M1/99‑99 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 2:1908194‑M1/99‑99 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt > 2:606378‑M1/1‑1 (MQ=255) | ATTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTCAACAA > NC_000913/2224193‑2224389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |