| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,224,288 | IS5 (+) +4 bp | coding (580‑583/933 nt) | pbpG ← | D‑alanyl‑D‑alanine endopeptidase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 125 (0.790) | 76/194 | 1.2 | 99.2% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2224288 = | 1 (0.010) | coding (583/933 nt) | pbpG | D‑alanyl‑D‑alanine endopeptidase | |||||
| * | ? | NC_000913 | = 2224291 | 1 (0.010) | 236 (1.470) | 99/196 | 0.2 | 99.6% | coding (580/933 nt) | pbpG | D‑alanyl‑D‑alanine endopeptidase |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 308 total aligned reads displayed.
AATATTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTCAA > NC_000913/2224190‑2224386 | aaTATTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACt < 1:225323/99‑1 (MQ=255) atTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTaa < 1:3625525/99‑1 (MQ=255) atTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTaa < 2:2529838/99‑1 (MQ=255) atTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTaa < 2:3052820/99‑1 (MQ=255) atTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTaa < 2:1522631/99‑1 (MQ=255) ttCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAg > 1:2759412‑M1/1‑98 (MQ=255) ccAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAgga > 1:631240‑M1/1‑96 (MQ=255) ccAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAgga < 1:2829049‑M1/99‑4 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagactttccccgcgtattcgaaccttccTTAACTg > 1:1652526‑M2/93‑99 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTg > 2:484921‑M2/93‑99 (MQ=255) gTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaagg < 1:73374‑M1/99‑7 (MQ=255) ttATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggt < 2:553633‑M1/99‑8 (MQ=255) ttATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggt > 2:1631691‑M1/1‑92 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGa > 1:3711511‑M2/88‑99 (MQ=255) tATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtg < 2:2069043‑M1/99‑9 (MQ=255) tATCGAGATACACCAGATGATTAGTATTGCGTAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtg < 2:3160508‑M1/99‑9 (MQ=255) gcgATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGGTTAGAGAGGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaa < 1:2684084‑M1/99‑13 (MQ=255) gcgATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaa < 2:776988‑M1/99‑13 (MQ=255) cgggagaaaacatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCTCGATCaa > 2:3767913‑M2/84‑99 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCaa < 1:3384078‑M2/16‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAAc < 1:315030‑M2/17‑1 (MQ=255) gcaGATTATTATTAGTGCTTAACGGCATTCTATACGTCGGATGAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccc < 1:2059311‑M1/98‑21 (MQ=255) cAGATGATTAGTATTGCGGAACGGCCGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccct > 2:650387‑M1/1‑78 (MQ=255) cAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgcacaagtccct > 2:2697938‑M1/1‑78 (MQ=255) cAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccct > 2:1780795‑M1/1‑78 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagacgaatttcaccgcttattcgcaccttccTTAGCTGCCCGATCAACGGATATTGt < 2:2440968‑M2/26‑1 (MQ=255) atgatTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgat > 1:495352‑M1/1‑75 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTgg < 1:820222‑M2/33‑1 (MQ=255) aGTATTGCCGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgaga < 2:1207583‑M1/99‑31 (MQ=255) gTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagat > 2:3101969‑M1/1‑68 (MQ=255) gTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagat > 2:1047126‑M1/1‑68 (MQ=255) gTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagat < 1:2187201‑M1/99‑32 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCa > 2:3476986‑M2/65‑99 (MQ=255) tATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatc > 2:2284507‑M1/1‑67 (MQ=255) tATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatc < 2:2141004‑M1/99‑33 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCaa > 1:899348‑M2/64‑99 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAAt < 1:1382079‑M2/37‑1 (MQ=255) aggaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGa < 2:2948157‑M2/39‑1 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt < 2:2497407‑M1/99‑38 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt > 1:3249821‑M1/1‑62 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt < 1:2576982‑M1/99‑38 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt > 2:2325072‑M1/1‑62 (MQ=255) ggAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:3891153‑M1/99‑39 (MQ=255) ggAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:786306‑M1/99‑39 (MQ=255) ggAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt > 1:2490935‑M1/1‑61 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCa > 2:1335692‑M2/58‑99 (MQ=255) gCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc > 2:2346715‑M1/1‑55 (MQ=255) cAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 2:173324‑M1/1‑54 (MQ=255) cAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 2:3918423‑M1/1‑54 (MQ=255) cAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 1:1261711‑M1/1‑54 (MQ=255) aGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 2:3191530‑M1/99‑47 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTaa > 1:2452378‑M2/48‑99 (MQ=255) ggactgagtcagccgggaagaatttccccgcttattcgcaccttccTTAACGGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAg < 2:585534‑M2/53‑1 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGt < 2:1285272‑M2/54‑1 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGt < 1:579699‑M2/54‑1 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTc > 1:1402667‑M2/45‑99 (MQ=255) tCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:3809262‑M1/99‑57 (MQ=255) gtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACggg < 2:1668052‑M2/60‑1 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCa > 2:1884375‑M2/38‑99 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAg > 1:3562738‑M2/37‑99 (MQ=255) aTTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag > 2:3785975‑M1/1‑39 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGtt < 1:104641‑M2/65‑1 (MQ=255) tAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:3994075‑M1/99‑63 (MQ=255) tAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 2:2885795‑M1/99‑63 (MQ=255) gagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGa > 1:2287956‑M2/33‑99 (MQ=255) gagaAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt > 2:892502‑M1/1‑35 (MQ=255) gaagaatttccccgcttatccgcaccttccTTAACTGCCCGATCAACGGATATCGTTTGCTAGCAATTAGCAGTTTGGTTAAGTCACGGGCAGTTGaaa < 1:3676891‑M2/69‑1 (MQ=255) agaAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc > 1:1462551‑M1/1‑34 (MQ=255) gaAGGTTGCCATATCTTCCCGGGTAGGACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:1782015‑M1/99‑67 (MQ=255) aagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAAc < 1:290616‑M2/70‑1 (MQ=255) aaGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat > 1:2433470‑M1/1‑32 (MQ=255) gTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat < 2:1949718‑M1/99‑71 (MQ=255) tttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTAt > 2:1018352‑M2/25‑99 (MQ=255) tttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTAt < 2:1086982‑M2/75‑1 (MQ=255) gCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag < 1:388316‑M1/99‑74 (MQ=255) ccATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 1:2207315‑M1/1‑25 (MQ=255) ccATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 1:1393323‑M1/1‑25 (MQ=255) ccATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 2:2386806‑M1/1‑25 (MQ=255) cATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 1:4050778‑M1/99‑76 (MQ=255) cATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 1:2266930‑M1/1‑24 (MQ=255) gcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGa < 2:3015071‑M2/82‑1 (MQ=255) ctcTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc < 1:3447875‑M1/98‑79 (MQ=255) cttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGAc > 2:1451413‑M2/17‑99 (MQ=255) ttCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaag > 2:3388322‑M1/1‑18 (MQ=255) attcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAAt > 1:2364851‑M2/14‑99 (MQ=255) ttcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATc < 1:1159604‑M2/87‑1 (MQ=255) ccGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta > 2:3333185‑M1/1‑15 (MQ=255) cGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 1:941489‑M1/99‑86 (MQ=255) gggTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc < 2:408599‑M1/99‑87 (MQ=255) gcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCgg > 1:352664‑M2/10‑99 (MQ=255) ggTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct < 1:1922876‑M1/99‑88 (MQ=255) caccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGt > 1:3105647‑M2/9‑99 (MQ=255) cttccTTAACTGCCCGATCCACGGATATTGTTTGCTGGAAATGAGCAGTTTGGTTAAGTCACGGGTAGTTGAAACGTTATGCACCGACAATCCGGTAgg < 2:3622311‑M2/94‑1 (MQ=255) ttccTTAACAGCCCGATCAACGGATATTGTTTGGTGGCAATGAGCAGTTTGGCTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGt > 2:3742672‑M2/5‑99 (MQ=255) aacgttaaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagtgttcatcatgagtcatcaacttaccttcgc < 1:3309004‑M1/95‑92 (MQ=255) taCTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGtt > 1:1308313/1‑99 (MQ=255) aCTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg > 1:2856338‑M1/1‑6 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac < 1:1007801‑M1/99‑96 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 2:259460‑M1/1‑4 (MQ=255) ttAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTcaa > 2:322993/1‑99 (MQ=255) | AATATTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTCAA > NC_000913/2224190‑2224386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |