| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,470,173 | IS5 (–) +4 bp | coding (1043‑1046/1332 nt) | gtrS → | serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 214 (1.330) | 109/196 | 0.0 | 95.8% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2470173 = | 9 (0.060) | coding (1043/1332 nt) | gtrS | serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage | |||||
| * | ? | NC_000913 | = 2470176 | 9 (0.060) | 172 (1.070) | 96/196 | 0.2 | 94.8% | coding (1046/1332 nt) | gtrS | serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage |
| ? | NC_000913 | = 3131340 | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 406 total aligned reads displayed.
TGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCATCTT > NC_000913/2470078‑2470274 | tgatgGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTaa < 1:1189595/99‑1 (MQ=255)tgatgGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTaa < 2:2557387/99‑1 (MQ=255)tgatgGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTaa < 1:2727204/99‑1 (MQ=255)tgatgGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTaa < 1:3334310/99‑1 (MQ=255) tcggcgaaggtaagttgatggctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAc < 2:1485685‑M2/5‑1 (MQ=255) gATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAg > 2:588826‑M1/1‑98 (MQ=255) cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATaa < 1:1838423‑M2/9‑1 (MQ=255) tgtgATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaagg > 1:1747138‑M1/1‑93 (MQ=255) gATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgc > 1:2218384‑M1/1‑90 (MQ=255) aTGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcg > 2:1088338‑M1/1‑89 (MQ=255) aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACaa < 1:1496675‑M2/16‑1 (MQ=255) aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACaa < 1:3462376‑M2/16‑1 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAata > 2:2644965‑M2/82‑99 (MQ=255) tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAatata < 1:2588019‑M2/20‑1 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAatatat < 1:166149‑M2/21‑1 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAatatat > 2:6595‑M2/79‑99 (MQ=255) gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTa < 2:1147412‑M2/24‑1 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTaaaa > 1:108977‑M2/73‑99 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTaaaa < 2:3516012‑M2/27‑1 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTaaaa > 1:2191483‑M2/73‑99 (MQ=255) aaGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaa > 2:2072653‑M1/1‑76 (MQ=255) aGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaa > 2:2375218‑M1/1‑75 (MQ=255) gAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaat > 2:1285963‑M1/1‑74 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACa > 2:2916419‑M2/70‑99 (MQ=255) aaaaTTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaatt < 1:3901747‑M1/99‑27 (MQ=255) gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACAt > 1:372754‑M2/69‑99 (MQ=255) aaaTTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattc < 1:550055‑M1/99‑28 (MQ=255) aaaTTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattc < 1:720972‑M1/99‑28 (MQ=255) tattTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttct < 2:1366510‑M1/99‑32 (MQ=255) aaccctgttctatggctccagttgagaaacatgatcgcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGa < 2:3842707‑M2/35‑1 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGAtt > 1:2088094‑M2/63‑99 (MQ=255) ttCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcgg < 1:3066623‑M1/99‑35 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGAttt > 1:3383963‑M2/62‑99 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTtat > 1:849055‑M2/60‑99 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTtata > 1:2959573‑M2/59‑99 (MQ=255) tGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgac < 1:2252498‑M1/99‑40 (MQ=255) tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCAt > 1:1392758‑M2/55‑99 (MQ=255) taAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtc < 2:3052172‑M1/99‑46 (MQ=255) aaaaaaCTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtca > 2:3827030‑M1/1‑53 (MQ=255) tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGttat > 1:4041575‑M2/49‑99 (MQ=255) aaaaaCTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat > 1:1916964‑M1/1‑52 (MQ=255) aaaaCTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt < 2:828621‑M1/99‑49 (MQ=255) agatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTtattat > 2:1018491‑M2/46‑99 (MQ=255) agatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTtattat > 1:13023‑M2/46‑99 (MQ=255) tACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt > 2:251069‑M1/1‑46 (MQ=255) acacGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 1:1944566‑M1/99‑55 (MQ=255) cacGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc < 2:69446‑M1/99‑56 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTa > 1:789870‑M2/40‑99 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTa < 2:2988128‑M2/60‑1 (MQ=255) cGTAATATATGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt > 1:2329411‑M1/1‑42 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccCTAACATCAAAGACAACATATTTAAAAACATTAGAATTATATCAATGTTATTATTTTTTAt > 2:3999815‑M2/39‑99 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTAt > 2:1749050‑M2/39‑99 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTAt > 1:463688‑M2/39‑99 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTAt > 2:3795937‑M2/39‑99 (MQ=255) aacatgatcgcatatcaggaacttgttcgcaccttctCTAACATAAAAGACAATATATTTAATAACATTAGATTTATATCATTGTTATTATTTTTTAtt < 2:2592206‑M2/62‑1 (MQ=255) acatgatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTg > 2:3037276‑M2/37‑99 (MQ=255) gatctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTc > 2:1207161‑M2/33‑99 (MQ=255) tctcatatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTa > 2:94911‑M2/31‑99 (MQ=255) tGGAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga > 1:14643‑M1/1‑33 (MQ=255) ggAGAATCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag > 2:2794628‑M1/1‑32 (MQ=255) atatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTAtttt > 1:1215749‑M2/27‑99 (MQ=255) tatcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTAttttt < 1:2406753‑M2/74‑1 (MQ=255) tatcagggacttgtccgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTAttttt < 1:925720‑M2/74‑1 (MQ=255) tcagggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTttat < 1:1004302‑M2/76‑1 (MQ=255) tCAAACATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt > 2:3413573‑M1/1‑26 (MQ=255) agggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTttatta < 1:2912037‑M2/78‑1 (MQ=255) agggacttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTttatta > 1:2436191‑M2/22‑99 (MQ=255) aCATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 2:2145947‑M1/99‑78 (MQ=255) aCATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 1:1787050‑M1/99‑78 (MQ=255) cATACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc < 2:1907406‑M1/99‑79 (MQ=255) acttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGaaa < 2:1875099‑M2/82‑1 (MQ=255) cttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAaat < 2:862518‑M2/83‑1 (MQ=255) catgttcgcaccttccCTAACATAAAAGACAATATATTTAAATACATTAGAGTTATATCATTGTTATAATTTATTATTGATTCTATTTTTATTAGAaat < 2:4044226‑M2/83‑1 (MQ=255) ttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAaata < 1:2683231‑M2/84‑1 (MQ=255) ttgttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATAATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAaata > 2:1704904‑M2/16‑99 (MQ=255) tACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgcttttttctc < 2:3734614‑M1/99‑81 (MQ=255) tACTAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc > 2:1427926‑M1/1‑19 (MQ=255) ttcgcaccttccCTAACATAAAAGACAATATTTTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAataata < 2:3226028‑M2/87‑1 (MQ=255) ttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAataata > 2:3289987‑M2/13‑99 (MQ=255) ttcgcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAataata > 2:505935‑M2/13‑99 (MQ=255) tAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg > 1:4101158‑M1/1‑16 (MQ=255) tAACGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg > 1:3573590‑M1/1‑16 (MQ=255) aaCGACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt < 2:2768587‑M1/99‑85 (MQ=255) gcaccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATaataaaa > 1:3159867‑M2/10‑99 (MQ=255) gACTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa < 2:1194203‑M1/99‑88 (MQ=255) caccttccCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATaataaaat > 2:1548975‑M2/9‑99 (MQ=255) aCTATTACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat < 1:4135746‑M1/99‑89 (MQ=255) ttACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct > 1:3006478‑M1/1‑7 (MQ=255) ttACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct > 2:3595386‑M1/1‑7 (MQ=255) aCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg > 2:3352305‑M1/1‑5 (MQ=255) cTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga > 2:469273‑M1/1‑4 (MQ=255) cTAACATAAAAGAGAATATATTTAAAAACATTAGATTTATATCATTGCTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCAt > 1:3626358/1‑99 (MQ=255) cTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCAt > 1:2023282/1‑99 (MQ=255) cTAACATAAAAGACAATATATTGAAAAACATTAGATATATATCATTGTTAGTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCAt < 1:1415083/99‑1 (MQ=255) tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 2:2217588‑M1/1‑3 (MQ=255) tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 1:590387‑M1/99‑97 (MQ=255) tAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGATTCTATTTTTATTAGAAATAATAAAATAAAGGCATc > 2:3667311/1‑99 (MQ=255) aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 1:638407‑M1/99‑98 (MQ=255) aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc > 2:3924066‑M1/1‑1 (MQ=255) aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc > 1:3288701‑M1/1‑1 (MQ=255) | TGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCATCTT > NC_000913/2470078‑2470274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |