| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 282512 | 24 (0.590) | 7 (0.180) | 5/282 | 2.9 | 21.3% | coding (235/909 nt) | yagE | 2‑keto‑3‑deoxy gluconate (KDG) aldolase; CP4‑6 prophage |
| ? | NC_000913 | = 282518 | 29 (0.750) | coding (241/909 nt) | yagE | 2‑keto‑3‑deoxy gluconate (KDG) aldolase; CP4‑6 prophage | |||||
TGATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGAAAGTGTCGGAAGCGAACCTGATCCGCTATTTCGAGCAGGTGG > NC_000913/282372‑282659 | tGATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGgcac > 2:635991‑M2/1‑147 (MQ=255) gATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGgcac < 2:94080‑M2/150‑5 (MQ=255) gATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGgcac < 2:618839‑M2/150‑5 (MQ=255) gATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGgcac < 2:330673‑M2/150‑5 (MQ=255) gATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGgcac < 2:506036‑M2/150‑5 (MQ=255) tCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGgcaccgg < 1:416717‑M2/151‑8 (MQ=255) acgaTCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGgcaccggca > 1:626363‑M2/1‑141 (MQ=255) cAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCtgatcggcaccggcacgcgacgatcgaca < 2:316050‑M1/149‑30 (MQ=255) gCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAATCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAAc < 2:302658/150‑1 (MQ=255) ccTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCtgatcggcaccggcacgcgacgatcgacatgatcgatagcaaag < 2:422576‑M1/151‑45 (MQ=255) ccTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCtgatcggcaccggcacgcgacgatcgacatgatcgatagcaaag < 2:43546‑M1/151‑45 (MQ=255) cTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCCGATCAgcaccggcacgcgacgatcgacatgatcgatagcaaag < 1:581498‑M2/150‑39 (MQ=255) ttcCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTcagccag > 2:492619/1‑150 (MQ=255) ttcCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTcagccag > 2:632213/1‑150 (MQ=255) tGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcg < 2:518829/151‑1 (MQ=255) aGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgggcg < 1:293762/150‑1 (MQ=255) aGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCCGATCAgcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcgg < 2:556316‑M2/150‑64 (MQ=255) aGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCCGATCAgcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcgg < 2:61404‑M2/150‑64 (MQ=255) cTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCAt < 1:408829/149‑1 (MQ=255) gcgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg < 2:531902/150‑1 (MQ=255) gcgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg < 2:352449/150‑1 (MQ=255) gcgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg < 2:322944/150‑1 (MQ=255) ccGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCtgatcggcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaact < 2:61404‑M1/150‑88 (MQ=255) ccGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCtgatcggcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaact < 2:556316‑M1/150‑88 (MQ=255) cGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc < 2:560847/151‑1 (MQ=255) cGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc < 2:378235/151‑1 (MQ=255) gCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAAccc > 2:516924/1‑150 (MQ=255) cGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAAccc < 1:103300/149‑1 (MQ=255) aaaGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCctact < 1:421134/151‑1 (MQ=255) aaaGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCctact < 1:520406/151‑1 (MQ=255) aaaGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCctact < 1:60014/151‑1 (MQ=255) aaGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCctacta < 1:14505/151‑1 (MQ=255) ccATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCtactac < 1:614560/149‑1 (MQ=255) ttGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGaa < 1:174740/151‑1 (MQ=255) ttGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGaa < 2:28524/151‑1 (MQ=255) ttGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGaa < 2:25805/151‑1 (MQ=255) cTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCtgatcggcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacag < 1:581498‑M1/150‑113 (MQ=255) cTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGAAAGTGTCg > 2:551266/1‑151 (MQ=255) cTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCCGATCAgcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacagg < 2:422576‑M2/151‑108 (MQ=255) cTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCCGATCAgcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacagg < 2:43546‑M2/151‑108 (MQ=255) gCTATCGCTCATGTCGATCGTCGAGTGCCGGAGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCTCAGCCGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGAAAGTGTCGGAAg > 2:126487/1‑151 (MQ=255) tGTCGATCGTCGCGTGCCGGTGCCGATCAgcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacaggccgtcaacgcctg < 2:316050‑M2/149‑121 (MQ=255) tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGAAAGTGTCGGAAGCGAACCTGATCCGCTAttt < 1:324738/150‑1 (MQ=255) tgccggtgccgatcagcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacaggccgtcaacgcctgctttgatcagatcgt > 1:626363‑M1/1‑9 (MQ=255) ccggtgccgatcagcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacaggccgtcaacgcctgctttgatcagatcgtcga < 1:416717‑M1/151‑145 (MQ=255) gtgccgatcagcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacaggccgtcaacgcctgctttgatcagatcgtcgatca > 2:635991‑M1/1‑4 (MQ=255) gtgccgatcagcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacaggccgtcaacgcctgctttgatcagatcgtcgatc < 2:330673‑M1/150‑147 (MQ=255) gtgccgatcagcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacaggccgtcaacgcctgctttgatcagatcgtcgatc < 2:618839‑M1/150‑147 (MQ=255) gtgccgatcagcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacaggccgtcaacgcctgctttgatcagatcgtcgatc < 2:506036‑M1/150‑147 (MQ=255) gtgccgatcagcaccggcacgcgacgatcgacatgatcgatagcaaagcgggcaatggctttacgctcttcggcgccgagctgggagaactcgccaccgctgcccaggaagaacaggccgtcaacgcctgctttgatcagatcgtcgatc < 2:94080‑M1/150‑147 (MQ=255) | TGATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGAAAGTGTCGGAAGCGAACCTGATCCGCTATTTCGAGCAGGTGG > NC_000913/282372‑282659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |