| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2492466 = | 299 (1.040) | 17 (0.070) | 10/138 | NT | 6.5% | intergenic (+9/+37) | yhfP/rimI_4 | Putative quinone oxidoreductase YhfP/Ribosomal‑protein‑alanine acetyltransferase |
| ? | USA300TCH1516_ALE | 2492499 = | 233 (0.940) | intergenic (+42/+4) | yhfP/rimI_4 | Putative quinone oxidoreductase YhfP/Ribosomal‑protein‑alanine acetyltransferase | |||||
Only 100 of 417 total aligned reads displayed.
TGAACTTCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCAAA > USA300TCH1516_ALE/2492376‑2492556 | tgaACTTCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGa > 1:2471316/1‑91 (MQ=255)tgaACTTCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGa > 2:4879071/1‑91 (MQ=255) gaACTTCCATAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGaa < 2:5344525/91‑1 (MQ=255) agactacccagcggataaattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaaa < 2:4091937‑M1/2‑1 (MQ=255) actacccatcggataaattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaaaaa > 2:2680616‑M1/88‑91 (MQ=255) aCTTCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGaaaa > 1:1000752/1‑91 (MQ=255) ctacccagcggataaattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaaaaaa < 2:292732‑M1/5‑1 (MQ=255) ctacccagcggataaattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaaaaaa > 1:3738541‑M1/87‑91 (MQ=255) cTTCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGaaaaa > 1:4159968/1‑91 (MQ=255) cTTCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGaaaaa > 1:345292/1‑91 (MQ=255) cTTCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGaaaaa > 1:1152281/1‑91 (MQ=255) ttCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAg < 1:679654/91‑1 (MQ=255) tacccagcggataaattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaAAAAAg < 1:5066594‑M1/6‑1 (MQ=255) cccagcggataaattatatacacaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaAAAAAGAc < 2:4294817‑M1/8‑1 (MQ=255) ccAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGAc > 2:4931560/1‑91 (MQ=255) cagcggataaattatatccaaaatttggatttatacctaacgaaccagattcaggcggtatgtatatcaaatactaaattaAAAAAGACAt < 2:2324145‑M1/10‑1 (MQ=255) cagcggataaattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaAAAAAGACAt < 1:2390876‑M1/10‑1 (MQ=255) gAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATc < 1:1431783/91‑1 (MQ=255) gAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATc < 2:2818217/91‑1 (MQ=255) gAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATc < 2:3097596/91‑1 (MQ=255) gAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAATATTCATGAAAAAGACATc < 2:1325275/91‑1 (MQ=255) agcggataaattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaAAAAAGACATc > 1:3313182‑M1/81‑91 (MQ=255) aacaacTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATcc < 2:1972705/91‑1 (MQ=255) aacaacTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATcc > 2:3265576/1‑91 (MQ=255) acaacTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATccc > 2:1234237/1‑91 (MQ=255) acaacTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATccc > 2:3372048/1‑91 (MQ=255) caacTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCg < 1:3151682/91‑1 (MQ=255) caacTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCg < 1:1514598/91‑1 (MQ=255) aacTTAACAAAGTAATTAAACATGATAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGt < 2:5235778/91‑1 (MQ=255) cTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑Ta > 1:474028/1‑91 (MQ=255) cTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑Ta > 1:2218012/1‑91 (MQ=255) aattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaAAAAAGACATCCCGT‑TATg > 1:1746228‑M1/73‑91 (MQ=255) aattatatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaAAAAAGACATCCCGT‑TATg > 1:2822686‑M1/73‑91 (MQ=255) aaCAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGc > 2:69930/1‑91 (MQ=255) aaCAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGc > 1:2851328/1‑91 (MQ=255) aCAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCg < 1:2359274/91‑1 (MQ=255) aCAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCg > 1:4644441/1‑91 (MQ=255) aCAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCg < 1:1676480/91‑1 (MQ=255) cAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCga > 2:3905348/1‑91 (MQ=255) aaaGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCgag < 2:4216761/91‑1 (MQ=255) aaaGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCgag < 1:862938/91‑1 (MQ=255) tatacaaaatttggatttatacctaccgaaccagattcaggcggtatgtatatcaaatactaaattaAAAAAGACATCCCGT‑TATGCgaga > 1:4056526‑M1/68‑91 (MQ=255) aaGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCgaga < 2:208817/91‑1 (MQ=255) aaGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCgaga > 1:2092454/1‑91 (MQ=255) aaGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCgaga < 1:3002754/91‑1 (MQ=255) gTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATg > 1:1929931/1‑91 (MQ=255) aTTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCt > 2:740986/1‑91 (MQ=255) aaaCATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCtttt > 1:5391236/1‑91 (MQ=255) aaCATGAAAATAAAGGGCGCATTGTTATCGACTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCttttt > 1:5519934/1‑91 (MQ=255) aCATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCtttttt > 2:808774/1‑91 (MQ=255) aCATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCtttttt > 2:1165267/1‑91 (MQ=255) tGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAAt < 1:4939376/91‑1 (MQ=255) gAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAAtt < 1:437691/91‑1 (MQ=255) gAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAAtt < 2:3183606/91‑1 (MQ=255) gAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAAtt < 2:2166778/91‑1 (MQ=255) gAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAAtt < 1:2038138/91‑1 (MQ=255) gAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAAtt < 1:1054514/91‑1 (MQ=255) aaaaTAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAAttt > 2:4445254/1‑91 (MQ=255) aaaaTAAAGGGCGCATTGTTATCGATTTCGGTGAAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAAttt > 1:5616308/1‑91 (MQ=255) aaGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTAtt > 1:1585012/1‑91 (MQ=255) aaGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTAtt > 1:3388954/1‑91 (MQ=255) aGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTAttt > 1:933102/1‑91 (MQ=255) ggCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGa > 2:5077848/1‑91 (MQ=255) ggCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGa < 1:1894134/91‑1 (MQ=255) gcATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGatat < 2:5644337/91‑1 (MQ=255) ttGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATataca > 2:1687921/1‑91 (MQ=255) ttGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATataca > 2:3731607/1‑91 (MQ=255) tGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATatacat < 1:484267/91‑1 (MQ=255) tATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATAcc > 1:2665116/1‑91 (MQ=255) tATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATAcc < 1:1985700/91‑1 (MQ=255) tCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGc < 1:3914292/91‑1 (MQ=255) cGATTTCGGTGTTGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGcc < 2:3646790/91‑1 (MQ=255) cGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGcc > 1:5218208/1‑91 (MQ=255) tttCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGa > 2:302336/1‑91 (MQ=255) ttCGGTCTAGATAAATAGCATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGaa < 1:4725540/91‑1 (MQ=255) ggTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCt < 1:754518/91‑1 (MQ=255) ggTGTAGATAAATAGTATTCATGAAAAACACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCt > 2:5406892/1‑91 (MQ=255) gtgtAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTg < 2:4770906/91‑1 (MQ=255) gtgtAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTg > 2:2260279/1‑91 (MQ=255) tgtAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTgg < 1:806928/91‑1 (MQ=255) tAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGtt > 2:3781011/1‑91 (MQ=255) tAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCggt < 1:500443/91‑1 (MQ=255) caaatactaaattaAAAAAGACATCTCGCATAA‑CGGGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCggta < 2:624952‑M1/77‑1 (MQ=255) aaaTAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCggta < 2:11441/91‑1 (MQ=255) aaTAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCggtag > 2:1569491/1‑91 (MQ=255) aTAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCggtagg < 1:4511991/91‑1 (MQ=255) gTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGtat > 2:1879766/1‑91 (MQ=255) gTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGtat < 1:1093759/91‑1 (MQ=255) tATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGtata > 2:348064/1‑91 (MQ=255) aTTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGCTATACATACCGCCTGTATCTGGTTCGGTAGGTATaa > 2:2516787/1‑91 (MQ=255) aTTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATaa > 1:3249116/1‑91 (MQ=255) tCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAAt < 2:4624120/91‑1 (MQ=255) tCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAAt < 2:5012272/91‑1 (MQ=255) cATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATc > 1:1304771/1‑91 (MQ=255) cATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATc < 2:1003319/91‑1 (MQ=255) aTGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATcc < 2:1910427/91‑1 (MQ=255) aTGAAAAAGACATCCCGT‑TACGCGAGATGTCTTTCCTAATTTAGTATTTGATATACATACCGCCTCAATCTGGTTCGGTAGGTATAAATcc < 2:4709264/91‑1 (MQ=255) tGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCa < 2:345292/91‑1 (MQ=255) gAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCaa < 1:3632238/91‑1 (MQ=255) AAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCaaa < 1:2289740‑M1/91‑1 (MQ=255) | TGAACTTCCAGAACAACTTAACAAAGTAATTAAACATGAAAATAAAGGGCGCATTGTTATCGATTTCGGTGTAGATAAATAGTATTCATGAAAAAGACATCCCGT‑TATGCGAGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCAAA > USA300TCH1516_ALE/2492376‑2492556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |