| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1166913 | 254 (0.880) | 17 (0.070) | 9/144 | NT | 6.2% | intergenic (+29/‑230) | USA300HOU_RS05790/fib_2 | hypothetical protein/Fibrinogen‑binding protein |
| ? | USA300TCH1516_ALE | = 1166922 | 283 (1.100) | intergenic (+38/‑221) | USA300HOU_RS05790/fib_2 | hypothetical protein/Fibrinogen‑binding protein | |||||
Only 100 of 372 total aligned reads displayed.
AATCATTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCTGATGAGTC > USA300TCH1516_ALE/1166833‑1167012 | aaTCATTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAt > 2:4315863‑M2/1‑90 (MQ=255) aTCATTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtg < 1:558689‑M2/91‑3 (MQ=255) aTCATTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtg < 1:3896596‑M2/91‑3 (MQ=255) aTCATTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtg > 1:3720528‑M2/1‑89 (MQ=255) tCATTAGCTGGGTCACAATATTTAATTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCCACATTCAAAtgg > 2:5250769‑M2/1‑88 (MQ=255) tCATTAGCTGGGTCACAATATTTAACTCTAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtgg < 2:2103177‑M2/91‑4 (MQ=255) tCATTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtgg < 1:4090080‑M2/91‑4 (MQ=255) cATTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtggt > 2:931483‑M2/1‑87 (MQ=255) aTTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtggtg < 2:608907‑M2/91‑6 (MQ=255) aactgGGTCACAATATTTAACTATATAATGAGAAGTTACAAATAAAATCTATGAGTTTATACCTTCAGACCCCAACATTCAAAtggtgtct < 2:4721876‑M2/89‑9 (MQ=255) aGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtggtgtct > 1:4194172‑M2/1‑83 (MQ=255) aGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAAtggtgtct < 1:3100806‑M2/91‑9 (MQ=255) aGCTGGGTCACAATATCTAACTATAGAATCAGAAGTTACAAATAAAATCTATGAGATCATACCTTCAGACACCAACGTTCAAAtggtgtct < 1:5189319‑M2/91‑9 (MQ=255) gTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTttg > 2:2521689/1‑91 (MQ=255) gTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTttg > 2:3467186/1‑91 (MQ=255) tCACAATGTTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTttgt < 1:4476571/91‑1 (MQ=255) caATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCACATGGCGTCTTTTCtgttgt > 2:5151828/1‑91 (MQ=255) caATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTATtgttgt > 2:1472986/1‑91 (MQ=255) atatTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTtgtgt > 1:1433818/1‑91 (MQ=255) tatTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTCTGTtgtgtg < 1:1000240/91‑1 (MQ=255) atTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTgg < 1:1477484/91‑1 (MQ=255) tttAACTATAGAATGAGACGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGt < 1:5552213/91‑1 (MQ=255) tttAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGt > 2:2791108/1‑91 (MQ=255) ttAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGtt < 2:4417369/91‑1 (MQ=255) ttAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGtt < 1:268149/91‑1 (MQ=255) aCTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTa > 1:1629155/1‑91 (MQ=255) aCTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTa > 1:1090741/1‑91 (MQ=255) aCTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTGCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTa > 2:5483870/1‑91 (MQ=255) cTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTAt < 2:192235/91‑1 (MQ=255) cTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTAt > 2:1118511/1‑91 (MQ=255) cTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTAGTTGTGTGGTTTTAt > 2:4343841/1‑91 (MQ=255) aGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTAttttt > 1:1269522/1‑91 (MQ=255) aGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTAttttt < 1:2418762/91‑1 (MQ=255) aTGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGaa > 1:4008948/1‑91 (MQ=255) gagaAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAAt > 2:2224644/1‑91 (MQ=255) gaAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTc > 2:4150318/1‑91 (MQ=255) gaAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTc > 1:5459503/1‑91 (MQ=255) gaAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTc < 1:1881621/91‑1 (MQ=255) aaGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCg < 2:4090080/91‑1 (MQ=255) aaGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCg > 1:3413373/1‑91 (MQ=255) aaGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCg < 2:1330319/91‑1 (MQ=255) aGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGa < 1:3600161/91‑1 (MQ=255) gTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGaa > 2:3549446/1‑91 (MQ=255) ttACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGaaa > 1:4770053/1‑91 (MQ=255) aCAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGaaaaa > 1:4963267/1‑91 (MQ=255) aTAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTag < 1:2810291/91‑1 (MQ=255) aTAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTag > 2:4282439/1‑91 (MQ=255) aaaTCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAgg > 1:2592001/1‑91 (MQ=255) aaTCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGc < 2:4668407/91‑1 (MQ=255) aTCTATGAGATTATACCTTCAGACACCAACATTCAAATTGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCa < 1:4680541/91‑1 (MQ=255) aTCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCa < 1:2229042/91‑1 (MQ=255) aTCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCa < 1:5289679/91‑1 (MQ=255) aTCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCa < 2:3888254/91‑1 (MQ=255) aTCTATGAGATTATACCTTCAGACACCAACATTCAAATGGAGTCTTTTTTGTCGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCa > 1:4700014/1‑91 (MQ=255) tcaaTGAGAATATACCTTCAGACACCAACAGTCAAATGGTGTATTTTTTGTTGTGTGTTTTTATTAAAAAAAAAAAAAAAAGTAGAGGCAt < 2:2848489/88‑1 (MQ=255) tCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCAt < 1:2768145/91‑1 (MQ=255) tCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCAt < 1:2213901/91‑1 (MQ=255) tCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCAt > 1:2171715/1‑91 (MQ=255) tATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGa < 1:4138965/91‑1 (MQ=255) tATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGa > 1:500281/1‑91 (MQ=255) aTGAGATTATACCTTCAGACACCAACATTCAAAtggtgtctgaaggtataatcacatagattttatttgtaacttctcattctatagttaa < 2:4003889‑M2/91‑59 (MQ=255) aTGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGaa > 1:1415908/1‑91 (MQ=255) gaTTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAAtttt < 1:2794159/91‑1 (MQ=255) gaTTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTAGAAAATAGAAAAAGTAGAGGCATGAAtttt < 2:897753/91‑1 (MQ=255) ttATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAAtttttt > 2:3028707/1‑91 (MQ=255) taCCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGAc > 2:4879115/1‑91 (MQ=255) ccTTCAGACACCAACATTCAAAtggtgtctgaaggtataacctcatagattttatttttaacttctcattctatagttaaatattgttacc < 2:3751885‑M2/91‑70 (MQ=255) ttCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAgt < 2:2441383/91‑1 (MQ=255) tCAGACACCAACATTCAAAtggtgtctgaaggtataatctcatagattttatttgtaacttctcattctatagttaaatattgtgacccag < 1:3793964‑M2/91‑73 (MQ=255) tCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAgtg < 1:955248/91‑1 (MQ=255) tCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAgtg < 2:232429/91‑1 (MQ=255) cAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAgtgt < 1:649215/91‑1 (MQ=255) gACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGtat > 1:182623/1‑91 (MQ=255) gACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGATTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGtat > 1:4322263/1‑91 (MQ=255) acacCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGtata < 1:3214047/91‑1 (MQ=255) acCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAg < 1:443235/91‑1 (MQ=255) ccAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGt > 1:2981149/1‑91 (MQ=255) cAACATTCAAAtggtgtctgaaggtataatctcatagattttatttgtaacttctcattctatagttaaatattgtgacccagctaatgat < 1:169738‑M2/91‑81 (MQ=255) cAACATTCAAAtggtgtctgaaggtataatctcatagattttatttgtaacttctcattctatagttaaatattgtgacccagctaatgat < 1:4843865‑M2/91‑81 (MQ=255) cAACATTCAAAtggtgtctgaaggtataatctcatagattttatttgtaacttctcattctatagttaaatattgtgacccagctaatgat < 1:5062842‑M2/91‑81 (MQ=255) cAACATTCAAAtggtgtctgaaggtataatctcatagattttatttgtaacttctcattcgatagttaaatattgtgacccagctaatgat < 1:4350247‑M2/91‑81 (MQ=255) cAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTg < 2:1683172/91‑1 (MQ=255) cAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTg < 1:5037961/91‑1 (MQ=255) cAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTg > 1:3493850/1‑91 (MQ=255) cAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGCAGAGGCATGAATTTTTTGACTAGTGTATAAGTg < 1:731271/91‑1 (MQ=255) aaCATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGc > 2:3327013/1‑91 (MQ=255) aaCATCCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGCATAAGTGc > 2:1014855/1‑91 (MQ=255) cATTCAAAtggtgtctgaaggtataatctcatagattttatttgtaacttctcattctatagttaaatattgtgacccagctaatgattaa < 2:199498‑M2/91‑84 (MQ=255) aTTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCtga < 1:4593663/91‑1 (MQ=255) aTTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCaga > 2:4980640/1‑91 (MQ=255) ttCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCtgat > 2:2644243/1‑91 (MQ=255) ttCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCtgat < 2:3650968/91‑1 (MQ=255) ttCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAAGTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCtgat < 2:4198490/91‑1 (MQ=255) cAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCtgatga > 2:2143842/1‑91 (MQ=255) aaaTGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAGAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCTGATGAg < 2:703849/91‑1 (MQ=255) aaaTGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCTGATGAg < 2:1204029/91‑1 (MQ=255) aaTGGTGTCTTTTTTGTTTTGTTGTTTTATTTTTGAAATTCGAAATAGTAGATGCATGAATTTTTTTACTAGTGTATAATTGCTGATGAGt > 2:3693012/1‑91 (MQ=255) aaTGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCTGATGAGt < 2:2936878/91‑1 (MQ=255) aTGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCTGATGAGTc > 1:2345095/1‑91 (MQ=255) aTGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTAGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCTGATGAGTc < 2:3174059/91‑1 (MQ=255) | AATCATTAGCTGGGTCACAATATTTAACTATAGAATGAGAAGTTACAAATAAAATCTATGAGATTATACCTTCAGACACCAACATTCAAATGGTGTCTTTTTTGTTGTGTGGTTTTATTTTTGAAATTCGAAAAAGTAGAGGCATGAATTTTTTGACTAGTGTATAAGTGCTGATGAGTC > USA300TCH1516_ALE/1166833‑1167012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |