New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? USA300TCH1516_ALE 2850817 =230 (1.260)9 (0.060) 7/226 NT 4.5% intergenic (+16/+103) pcp/USA300HOU_RS14605 Pyrrolidone‑carboxylate peptidase/hypothetical protein
?USA300TCH1516_ALE 2850866 = 180 (1.110)intergenic (+65/+54) pcp/USA300HOU_RS14605 Pyrrolidone‑carboxylate peptidase/hypothetical protein
Rejected: Frequency below/above cutoff threshold.

TTATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  USA300TCH1516_ALE/2850969‑2850817
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagggtgcttttgGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTACTGAAA  >  USA300TCH1516_ALE/2850866‑2851005
                                                                                                                                                                                                                                                                                                       
TTATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATT                                                                                                                                                          <  1:172217/141‑1
  ATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAT‑‑GTTAGACCTAAACTAACAAATTAG                                                                                                                                                        >  1:1013531/1‑141
  ATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAG                                                                                                                                                        >  1:1287109/1‑141
  ATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAG                                                                                                                                                        <  1:1481086/141‑1
  ATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAAGCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAG                                                                                                                                                        >  4:660998/1‑141
   TTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGG                                                                                                                                                       >  2:988041/1‑141
    TATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGG                                                                                                                                                      <  1:631262/141‑1
     ATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGT                                                                                                                                                     >  4:442557/1‑141
      TTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTG                                                                                                                                                    <  1:1100080/141‑1
      TTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTG                                                                                                                                                    <  4:407797/141‑1
      TTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTG                                                                                                                                                    <  2:550168/141‑1
       TTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGC                                                                                                                                                   <  2:618517/141‑1
       TTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGC                                                                                                                                                   <  2:618500/141‑1
       TTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGC                                                                                                                                                   <  2:618417/141‑1
       TTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGC                                                                                                                                                   >  4:67011/1‑141
       TTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGC                                                                                                                                                   >  3:362303/1‑141
        TATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTCGCTAAAATAAATAATTATAGTAACACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCT                                                                                                                                                  <  1:1402047/141‑1
        TATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCT                                                                                                                                                  <  2:362537/141‑1
        TATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCT                                                                                                                                                  >  3:360060/1‑141
        TATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCT                                                                                                                                                  <  3:310250/141‑1
         ataactcTGTAAATCTTAGTAAGTTAAAAAAAGAAGACCAAACTATGTCGTTTAGCCAAACTACATCACTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTT                                                                                                                                                 <  1:1241416/134‑1
         ATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTT                                                                                                                                                 <  4:199240/141‑1
         ATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTT                                                                                                                                                 <  2:311281/141‑1
         ATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTT                                                                                                                                                 <  1:1363483/141‑1
         ATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTT                                                                                                                                                 <  3:558033/141‑1
         ATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTT                                                                                                                                                 <  3:60163/141‑1
          TACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTT                                                                                                                                                <  4:543497/141‑1
          TACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTT                                                                                                                                                >  4:248176/1‑141
           ACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTT                                                                                                                                               <  3:190559/141‑1
            CATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTG                                                                                                                                              <  1:1656622/141‑1
            CATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGCGTGCTTTTG                                                                                                                                              <  1:1454396/141‑1
                                          AAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAGTTGTTAGTTTAAGTCTAAC‑‑TTTAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGA                                                                                                                <  4:411023/141‑1
                                                                          TCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAG                                                                                                                                                        >  2:1523694/1‑69
                                                                          TCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAG                                                                                                                                                        <  1:1523694/69‑1
                                                                                            ATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAA                                                              >  3:401646/1‑141
                                                                                                         AAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGT                                                 >  1:163108/1‑141
                                                                                                              CACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAA                                            >  4:333909/1‑141
                                                                                                               ACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAAT                                           >  1:999461/1‑141
                                                                                                                   TAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATA                                       >  2:508662/1‑141
                                                                                                                   TAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATA                                       >  4:461956/1‑141
                                                                                                                   TAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATA                                       >  2:1106511/1‑141
                                                                                                                         GTTAGACTTAAACTAACAAATTAGGGTGCTTATGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATt                                   >  2:594393/1‑140
                                                                                                                                              TAGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTA              >  1:593450/1‑141
                                                                                                                                               gGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTAT             >  1:1571803/2‑141
                                                                                                                                               AGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTAT             >  1:476238/1‑141
                                                                                                                                               AGGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTAT             >  1:1571761/1‑141
                                                                                                                                                gtGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATA            <  2:1124362/139‑1
                                                                                                                                                GGGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATA            >  3:150139/1‑141
                                                                                                                                                 GGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAATTGATATATTTAGAATGATGAATATAC           >  2:263447/1‑141
                                                                                                                                                 GGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATAC           >  1:1444803/1‑141
                                                                                                                                                 GGTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATAC           <  2:1323012/141‑1
                                                                                                                                                  GTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACT          >  4:326611/1‑141
                                                                                                                                                  GTGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACT          >  1:509034/1‑141
                                                                                                                                                   TGCTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTT         <  2:279775/141‑1
                                                                                                                                                     CTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTAC       >  3:320336/1‑141
                                                                                                                                                     CTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTAC       >  4:334779/1‑141
                                                                                                                                                     CTTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTAC       >  4:670785/1‑141
                                                                                                                                                      TTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTTACTTCTTAAAATTTACAAATGTATAAATAATAAATGCTATATTTATAATGTTGAGTATACTTACT      >  2:213208/1‑141
                                                                                                                                                      TTTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTACT      <  2:1331906/141‑1
                                                                                                                                                       TTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTACTG     <  3:2837/141‑1
                                                                                                                                                       TTTGGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTACTG     <  3:256652/141‑1
                                                                                                                                                          GGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTACTGAAA  <  4:124645/141‑1
                                                                                                                                                                                                                                                                                                       
TTATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAAACAATGTCGTTTAGCTAAAATACATCATTATAGTAAAACTGTATACCAATCATCCAAAAGCACCCTAAA‑‑GTTAGACTTAAACTAACAAATTAGGGTGCTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  USA300TCH1516_ALE/2850969‑2850817
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagggtgcttttgGATGATTGGTATACAGTTTTACTATAATGATGTATTTTAGCTAAACGACATTGTTTAGTCTTCTTTTTTTAACTTCCTAAAATTTACAAATGTATAAATAATAAATGCTATATTTAGAATGATGAGTATACTTACTGAAA  >  USA300TCH1516_ALE/2850866‑2851005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.