| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | 9 = | 270 (0.030) | 9 (0.000) +AAAAAAAAAA |
6/234 | NT | 6.7% | intergenic (–/‑271) | –/USA300HOU_RS14890 | –/replication protein |
| ? | NC_012417 | = 3123 | 0 (0.000) | intergenic (‑449/–) | USA300HOU_RS14900/– | hypothetical protein/– | |||||
Only 100 of 10473 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTAAAAATCAA > NC_012417/1‑149 | atatagctgtaactgttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATat‑‑‑‑‑‑‑aa < 1:542345‑M1/11‑1 (MQ=255) tatagatgtaactgttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATat‑‑‑‑‑‑‑aat > 2:1003017‑M1/130‑141 (MQ=255) atagctgtaactgttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATat‑‑‑‑‑‑‑aata > 3:478299‑M1/129‑141 (MQ=255) tagctgtaactgttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AAtac > 2:1212448‑M1/128‑141 (MQ=255) agctgtaactgttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AAtact > 2:1344553‑M1/127‑141 (MQ=255) gctgtaactgttgatattacagtgtttaaacgtgtttttgttcgtgttaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AAtacta < 2:1177324‑M1/16‑1 (MQ=255) taactgttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAg < 1:1042023‑M1/20‑1 (MQ=255) taactgttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAg > 1:762929‑M1/122‑141 (MQ=255) actgttgatattacagcgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGaa < 2:1522307‑M1/22‑1 (MQ=255) tgttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGt < 3:186843‑M1/24‑1 (MQ=255) gttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGta < 1:953786‑M1/25‑1 (MQ=255) ttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGtat > 4:390440‑M1/116‑141 (MQ=255) ttgatattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGtat < 1:261830‑M1/26‑1 (MQ=255) tattacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAAcc > 1:876481‑M1/112‑141 (MQ=255) attacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCg < 4:309881‑M1/31‑1 (MQ=255) attacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCg > 4:56448‑M1/111‑141 (MQ=255) tacagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGaa < 1:460756‑M1/33‑1 (MQ=255) cagtgtttaaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGaaaa < 1:1210481‑M1/35‑1 (MQ=255) aaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGata < 3:282217‑M1/43‑1 (MQ=255) aaacgtgtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGata < 1:623778‑M1/43‑1 (MQ=255) aacgtgtttttttgtgttaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGataa < 4:693051‑M1/44‑1 (MQ=255) tgttttttttcgttataggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATaaa < 2:588488‑M1/48‑1 (MQ=255) gtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGa < 1:918865‑M1/21‑1 (MQ=255) gtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATaaaa < 4:515076‑M1/49‑1 (MQ=255) gtttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattagtaaggtgtcggatctgaaataatacttgggggctttttatATGCAATAT‑‑‑‑‑‑‑AATACTAGTAGAAGTATAACCGAAAATTAAGATAAGaaaa < 2:414222‑M1/49‑1 (MQ=255) tttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAAc < 4:43192‑M1/50‑1 (MQ=255) ttttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACg > 3:92619‑M1/91‑141 (MQ=255) tttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatcctgggggtctttttatACGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGt < 4:608872‑M1/52‑1 (MQ=255) tttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGt > 2:677791‑M1/90‑141 (MQ=255) tttgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGt < 1:221361‑M1/52‑1 (MQ=255) tgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTa < 1:1121494‑M1/54‑1 (MQ=255) tgtgcgtgaaaggaaaatttgacaataaaaaaccccagttatatgattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTa < 1:380722‑M1/54‑1 (MQ=255) gtgcgtgaaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTaa > 3:141891‑M1/87‑141 (MQ=255) tgcgtgaaaggaaaatttggcaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTaaa < 1:1382104‑M1/56‑1 (MQ=255) aaaggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGatat < 2:1476965‑M1/62‑1 (MQ=255) aatgaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATg > 4:213890‑M1/79‑141 (MQ=255) ggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGAc > 1:182091‑M1/77‑141 (MQ=255) ggaaaatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGAc < 3:366741‑M1/65‑1 (MQ=255) aatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGaaa < 2:1047357‑M1/69‑1 (MQ=255) aatttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGaaa > 1:1254056‑M1/73‑141 (MQ=255) tttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAATCGAAAATCAAGATAACAAAACTTTAAAAGATATGACgaaaaa < 2:240593‑M1/71‑2 (MQ=255) ttgacaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGt < 2:202418‑M1/72‑1 (MQ=255) acaataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTggg < 3:226809‑M1/75‑1 (MQ=255) aataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGaa < 2:1093561‑M1/77‑1 (MQ=255) ataaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGaaa < 3:523652‑M1/78‑1 (MQ=255) taaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAaac > 2:464267‑M1/63‑141 (MQ=255) taaaaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAaac < 1:71353‑M1/79‑1 (MQ=255) aaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAaacaac > 2:866685‑M1/60‑141 (MQ=255) aaaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAaacaac > 2:82093‑M1/60‑141 (MQ=255) aaaccccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACg > 2:1431773‑M1/59‑141 (MQ=255) accccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGcc > 1:346888‑M1/57‑141 (MQ=255) cccatttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAANATANGACGAAAANTGGGAAACAACGCCCa > 3:656121‑M1/55‑141 (MQ=255) ccagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCAt < 1:585311‑M1/88‑1 (MQ=255) cagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATg > 2:324919‑M1/53‑141 (MQ=255) cagttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGAAGAAAAGTGGGAAACAACGCCCATg < 1:1630453‑M1/89‑1 (MQ=255) gttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATATGCAATATAATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGc > 4:476014‑M1/51‑141 (MQ=255) gttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGga < 4:127538‑M1/91‑1 (MQ=255) gttatattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGga < 4:17149‑M1/91‑1 (MQ=255) atattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGgagag > 2:915788‑M1/48‑141 (MQ=255) atattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGgagag > 1:298046‑M1/48‑141 (MQ=255) tattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGgagaga > 2:1603739‑M1/47‑141 (MQ=255) tattattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGgagaga > 2:504929‑M1/47‑141 (MQ=255) attattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGagaa < 4:256530‑M1/96‑1 (MQ=255) attattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGagaa > 1:1473147‑M1/46‑141 (MQ=255) ttattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCATGATAATTAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGagaaa < 1:422327‑M1/97‑1 (MQ=255) tattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGagaaaa > 2:546126‑M1/44‑141 (MQ=255) tattaaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGagaaaa > 2:1308148‑M1/44‑141 (MQ=255) aaggtgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGagaaaagaaa > 1:838417‑M1/40‑141 (MQ=255) ggtgtcgaatcttaaanaatactgggggtntttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAAt < 1:1085524‑M1/104‑1 (MQ=255) tgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAg > 2:727996‑M1/36‑141 (MQ=255) tgtcgaatcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAg > 1:1589914‑M1/36‑141 (MQ=255) atcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAGAAGAAAATAGATAATg < 1:1000125‑M1/112‑1 (MQ=255) atcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATg < 2:631974‑M1/112‑1 (MQ=255) tcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGt > 2:773192‑M1/29‑141 (MQ=255) tcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGt < 1:1519971‑M1/113‑1 (MQ=255) tcttaaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGt > 1:667981‑M1/29‑141 (MQ=255) aaataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGc < 1:499244‑M1/117‑1 (MQ=255) ataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATGATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTa < 3:613143‑M1/119‑1 (MQ=255) ataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTa < 2:999365‑M1/119‑1 (MQ=255) ataatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTa < 1:1429116‑M1/119‑1 (MQ=255) taatactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTAt < 2:1558520‑M1/120‑1 (MQ=255) atactgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGc < 2:1135891‑M1/122‑1 (MQ=255) ctgggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGa < 2:1380114‑M1/125‑1 (MQ=255) gggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAATATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGata > 3:691371‑M1/15‑141 (MQ=255) ggggtctttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGatat > 2:359820‑M1/14‑141 (MQ=255) ttttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGaa > 3:408829‑M1/7‑141 (MQ=255) ttatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAAt < 3:322590‑M1/137‑1 (MQ=255) tatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAAtt < 3:567784‑M1/138‑1 (MQ=255) tatATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAAtt < 3:44672‑M1/138‑1 (MQ=255) atATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAAttt < 2:1258770‑M1/139‑1 (MQ=255) tGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTaa > 2:953563/1‑141 (MQ=255) gCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTaaa < 1:1161647/141‑1 (MQ=255) gCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTaaa > 4:65040/1‑141 (MQ=255) cAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTaaaa > 1:155480/1‑141 (MQ=255) cAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTaaaa > 2:280024/1‑141 (MQ=255) cAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAAATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTaaaa < 2:1645294/141‑1 (MQ=255) aaTAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGa < 1:1338464/130‑1 (MQ=255) aaTAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTaaaaa > 1:798858/1‑141 (MQ=255) aaTAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTaaaaa > 1:1295690/1‑141 (MQ=255) tat‑‑‑‑‑‑‑aATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAATCTATGCAGATATACTAGAAATTTTAAAAATc < 4:352430/141‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGCAATAT‑‑‑‑‑‑‑AATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACAACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTAAAAATCAA > NC_012417/1‑149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |