| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | = 3069 | 387 (0.450) | 8 (0.010) | 6/266 | 44.8 | 4.2% | intergenic (‑395/–) | USA300HOU_RS14900/– | hypothetical protein/– |
| ? | NC_012417 | = 3118 | 0 (0.000) | intergenic (‑444/–) | USA300HOU_RS14900/– | hypothetical protein/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 842 total aligned reads displayed.
AATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012417/2978‑3125 | aaTAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTc < 1:285881/141‑1 (MQ=255) tAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCtt < 2:208150/141‑1 (MQ=255) aaCTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCttt > 1:44813/1‑141 (MQ=255) aCTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGTGGGTCtttt > 2:22603/1‑141 (MQ=255) aCTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCtttt > 1:100416/1‑141 (MQ=255) aCTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCtttt < 1:227986/141‑1 (MQ=255) aCTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCtttt < 1:190153/141‑1 (MQ=255) aCTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCtttt > 1:186621/1‑141 (MQ=255) aCTCGATTTTATATATAGAGCTGTAACTGTGGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCtttt < 1:233830/141‑1 (MQ=255) tCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTa < 1:258868/141‑1 (MQ=255) gATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATa < 1:225552‑M2/141‑2 (MQ=255) aTTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATat > 1:263829‑M2/1‑139 (MQ=255) aTTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATat > 1:178171‑M2/1‑139 (MQ=255) ttttATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatg < 1:222571‑M2/141‑4 (MQ=255) tttATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgc > 1:208423‑M2/1‑137 (MQ=255) tatatataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTT‑GTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatat < 2:299741‑M2/141‑10 (MQ=255) ataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataata > 1:109705‑M2/1‑128 (MQ=255) cTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACGATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactaa < 1:131058‑M2/141‑18 (MQ=255) gTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactacta < 2:170061‑M2/141‑20 (MQ=255) gTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactacta < 1:3786‑M2/141‑20 (MQ=255) tAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactag > 1:161179‑M2/1‑121 (MQ=255) tAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATGATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactag < 1:27158‑M2/141‑21 (MQ=255) tAACGGTTGATAGTACAGTGTTTAAACGTGTGTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactag > 1:121541‑M2/1‑121 (MQ=255) aaacGGTTGATATTAAAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactag > 2:192996‑M2/2‑121 (MQ=255) aaCTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactaga > 2:96626‑M2/1‑120 (MQ=255) aCTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaa < 1:215296‑M2/141‑23 (MQ=255) tGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagt < 1:1473‑M2/141‑25 (MQ=255) tGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagt < 2:13387‑M2/141‑25 (MQ=255) gTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagta < 1:13432‑M2/141‑26 (MQ=255) ttGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCATTTTATatgcaatataatactactaggagtat < 2:85941‑M2/141‑27 (MQ=255) gATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTGGCAGCTAAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataa < 1:142399‑M2/141‑29 (MQ=255) tatTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCTAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataacc > 1:301305‑M2/1‑111 (MQ=255) tatTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataacc > 2:203955‑M2/1‑111 (MQ=255) atTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccg > 2:12489‑M2/1‑110 (MQ=255) atTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccg > 1:164937‑M2/1‑110 (MQ=255) aCAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaa < 2:153454‑M2/141‑35 (MQ=255) cAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccggaaa < 2:159831‑M2/141‑36 (MQ=255) aGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCCTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaat < 2:72294‑M2/141‑37 (MQ=255) gtTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaa < 1:114282‑M2/141‑40 (MQ=255) ttAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaaga < 2:3491‑M2/141‑42 (MQ=255) gtgtTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataa < 1:204335‑M2/141‑48 (MQ=255) gtTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATATTAAATAATACTGGGGGTCTTTTTATatacaatataatactactagaagtataaccgaaaatcaagatactaaaa < 2:45946‑M2/141‑50 (MQ=255) ttttGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataactgaaaatcatgatcataaacag < 2:240457‑M2/141‑52 (MQ=255) tttGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataatcgaaaatcaagataataaaacgt < 2:236942‑M2/141‑53 (MQ=255) tgCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATAATGGGGGTCTTTTTATatgcaatataatactaataaaagtataaccaaaaataaaaataataaaacgataaa < 2:210693‑M2/141‑57 (MQ=255) tgAGTGAAAGGAAAAGTTGACAATAAAAAACACCAGTTATATTAGTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaa > 2:92404‑M2/1‑85 (MQ=255) ggcATGAAAGGAAAAATTGATAATAAACAACCCCAGTGATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTGTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaa > 2:253881‑M2/2‑85 (MQ=255) gTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaaga < 1:104483‑M2/141‑60 (MQ=255) gTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaaga < 1:239279‑M2/141‑60 (MQ=255) tGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagat < 1:182115‑M2/141‑61 (MQ=255) tGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATAATGGGGGTCTTTTTATatgcaatatcatactactagaagtataaccgaaaataaagataataaaacgttaaaagat < 2:38904‑M2/141‑61 (MQ=255) aGGAAAATTTGACAATAAATAGCCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatga > 2:74550‑M2/1‑77 (MQ=255) aGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgacattcaagataataaaacgttaaaagatatga < 2:147048‑M2/141‑65 (MQ=255) aGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatga < 1:292434‑M2/141‑65 (MQ=255) aGGAAAATTCGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatga > 2:166367‑M2/1‑77 (MQ=255) ggAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgac > 1:274268‑M2/1‑76 (MQ=255) ggAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgac > 1:99247‑M2/1‑76 (MQ=255) aaaaTTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacga < 2:6635‑M2/141‑68 (MQ=255) aaaTTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagacatgactaa < 1:279842‑M2/141‑69 (MQ=255) aaTTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATCATACTGTTGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaa > 1:253079‑M2/1‑72 (MQ=255) aTTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaaaataatactactagaagtatgacgtcaaatcaagataataaaacattaaaagatatgacgaaaa < 2:227833‑M2/141‑71 (MQ=255) ttGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagt > 2:273080‑M2/1‑69 (MQ=255) aCAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaaaatatgacaaaaaaaggg < 2:189122‑M2/141‑76 (MQ=255) aaTAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaa > 1:246100‑M2/1‑64 (MQ=255) tAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagagggaaac < 2:102809‑M2/141‑80 (MQ=255) aaaaaagcCCCAGATATATTATTAAGGTGTCGAATCTTAAATAATACTAGATGTATTTTTATatggaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaac > 1:84264‑M2/2‑62 (MQ=255) aaaaCCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaac > 2:115155‑M2/1‑59 (MQ=255) aaCCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgc > 2:277568‑M2/1‑57 (MQ=255) ccccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgccc < 1:3297‑M2/141‑87 (MQ=255) cccAGTTATATTAGTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgccca > 1:64757‑M2/1‑54 (MQ=255) cAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatg > 2:284096‑M2/1‑52 (MQ=255) gTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatgga > 1:93133‑M2/1‑50 (MQ=255) atatTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttacaagatatgacgaaaagtgggaaacaacgcccatggagag > 1:12682‑M2/1‑47 (MQ=255) attattAATGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaa > 1:139409‑M2/1‑45 (MQ=255) attaatAAAATGTCGAAACTTAAATAATACTGGGGGTATTATTATaaacaatataaaactaatagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaa > 2:247059‑M2/1‑45 (MQ=255) ttaAGGTGTGTAATCGTAAATAATACTGGGGATCTTTTAATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaaga > 2:181591‑M2/1‑41 (MQ=255) ggTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcacatggagagaaaagaaaaa < 1:151348‑M2/141‑105 (MQ=255) gtgtCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatgaacagaaaagaaaaaa < 2:290444‑M2/141‑106 (MQ=255) gtgtCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcacatgaagagaaaagaaaata < 2:58616‑M2/141‑106 (MQ=255) gtCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaataga < 1:277079‑M2/141‑108 (MQ=255) tCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagat < 1:79867‑M2/141‑109 (MQ=255) tCGAATCTTAAATAATACTGGGGGTCTAATTATtttcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagat > 2:121467‑M2/1‑33 (MQ=255) cGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagata < 2:176723‑M2/141‑110 (MQ=255) aaTCTTAAATAATACTGGAGGTCTTTTTATatgcaatataatactactagaagtattaccgtaaagacggataataaaacgttaaaagatatgacgaaaagtgggaaacaacacccatggagagaaaagaaaaaagatagt < 2:109378‑M2/141‑112 (MQ=255) aTCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagagggaaacaaaacccttaaagagaaaagaaaatagataatt < 2:197464‑M2/141‑113 (MQ=255) tCTTAAAGAATACTGGGGGTCTTTTTATatggaatataatactactagaagtataaccgaaagtccagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgt > 2:50998‑M2/1‑28 (MQ=255) cTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgta < 2:223944‑M2/141‑115 (MQ=255) ttAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaa > 2:79744‑M2/1‑26 (MQ=255) tAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaag > 1:51025‑M2/1‑25 (MQ=255) aaaTAATACAGGGGGTCTTTGTAGatgcaatataatactactagaagtaaaaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtcagc > 2:139933‑M2/1‑24 (MQ=255) aataatACTGGGGGTCTTTCTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagct > 1:169832‑M2/1‑23 (MQ=255) ataataCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagcta < 1:194562‑M2/141‑120 (MQ=255) ataataCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagcta < 1:73914‑M2/141‑120 (MQ=255) taataCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctat < 1:257499‑M2/141‑121 (MQ=255) taagaCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctat > 1:242836‑M2/1‑21 (MQ=255) aataCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatg > 2:12998‑M2/1‑20 (MQ=255) atgGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcaga > 1:200156‑M2/2‑16 (MQ=255) tGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagat < 2:218540‑M2/141‑127 (MQ=255) ggggTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatataagctatgcagatat < 2:261958‑M2/141‑129 (MQ=255) ggTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaaagttaaaagatatgacgaaaagtgggaaacaacgcccatagagagaaaagaacatagataatgtaagctatacagatatac < 2:26776‑M2/141‑131 (MQ=255) | AATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012417/2978‑3125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |