Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1655866	1655923	58	2 [1]	[1] 2	epsF	Type II secretion system protein F

AATAAACCTAAAATCAAAAATAAAATAGGCTGTAAAAACTGAGTCTGTTTTATCGCTTTATCTTCTATTTGTTTTACTAATATTTGCGAATATAACTTTAGTTCTACTTCTAGCTTCCCTCTCTTTTCACCTTGTAGCACAAACTTAATT  >  USA300TCH1516_ALE/1655725‑1655874                                                                                                                                             |          aataaaCCTAAAATCAAAAATAAAATAGGCTGTAAAAACTGAGTCTGTTTTATCGCTTTATCTTCTATTTGTTTTACTAATATTTGCGAATATAACTTTAGTTCTACTTCTAGCTTCCCTCTCTTTTCACCTTGTAGcaca           >  1:30638/1‑141 (MQ=255)          aaaaTCAAAAATAAAATAGGCTGTAAAAACTGAGTCTGTTTTATCGCTTTATCTTCTATTTGTTTTACTAATATTTGCGAATATAACTTTAGTTCTACTTCTAGCTTCCCTCTCTTTTCACCTTGTAGCACAAACttaatt  >  2:376/1‑141 (MQ=255)                                                                                                                                             |          AATAAACCTAAAATCAAAAATAAAATAGGCTGTAAAAACTGAGTCTGTTTTATCGCTTTATCTTCTATTTGTTTTACTAATATTTGCGAATATAACTTTAGTTCTACTTCTAGCTTCCCTCTCTTTTCACCTTGTAGCACAAACTTAATT  >  USA300TCH1516_ALE/1655725‑1655874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑