mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 110,805 | 0 | G | A | 58.9% | 24.4 / 57.7 | 56 | G222S (GGC→AGC) | USA300HOU_RS00515 | putative lipoprotein |
| * | USA300TCH1516_ALE | 512,643 | 0 | A | G | 34.2% | 41.5 / 27.9 | 39 | intergenic (+711/‑6052) | recR/speA_2 | Recombination protein RecR/Arginine decarboxylase |
| * | USA300TCH1516_ALE | 111,512 | 0 | A | G | 30.8% | 36.7 / 15.8 | 26 | S194S (TCA→TCG) | USA300HOU_RS00520 | putative lipoprotein |
| * | USA300TCH1516_ALE | 111,516 | 0 | C | A | 30.8% | 36.4 / 15.0 | 26 | Q196K (CAA→AAA) | USA300HOU_RS00520 | putative lipoprotein |