| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2085296 = | 60 (0.660) | 63 (0.780) | 48/232 | NT | 48.6% | coding (173/201 nt) | hlb_1 | Phospholipase C |
| ? | USA300TCH1516_ALE | = 2128343 | 80 (0.990) | coding (1/825 nt) | hlb_2 | Phospholipase C | |||||
Only 100 of 172 total aligned reads displayed.
AAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTAA > USA300TCH1516_ALE/2085156‑2085436 | ctacatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactcaaaacccaataaatactgttgttacaaggtttctat < 2:296367‑M1/1‑1 (MQ=255)aaaaaaaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTT > 2:344612‑M1/1‑141 (MQ=255) acatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacagaaaaacaactaaaattttagagagtatataatttagggacccattagggactccaaacccaataacaactgttgttacagagtttctaTGt < 2:406442‑M1/3‑1 (MQ=255) acatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGt > 1:620322‑M1/139‑141 (MQ=255) acatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGt < 2:1035931‑M1/3‑1 (MQ=255) acatccatgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaagaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGt < 2:694606‑M1/3‑1 (MQ=255) catccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggtcacttttttgattccaaaccaaataaaaactgttgttacaaggtttctaTGTa < 1:799304‑M1/4‑1 (MQ=255) tccgtgtattctcatttgttagaagaaaaatttaatgaagaggacgaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATc < 2:487210‑M1/6‑1 (MQ=255) aaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATC < 2:382561‑M1/141‑1 (MQ=255) ccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggatcccggatttactccaaacccactaaatactgttgttacaaggtttctaTGTATcc < 1:1037356‑M1/7‑1 (MQ=255) cgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCa < 2:304631‑M1/8‑1 (MQ=255) gtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaa > 1:396448‑M1/133‑141 (MQ=255) gtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaa < 2:669080‑M1/9‑1 (MQ=255) tgttttctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccactagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaaa < 2:958911‑M1/10‑1 (MQ=255) tgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaaa < 1:165913‑M1/10‑1 (MQ=255) gtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAAc < 1:892088‑M1/11‑1 (MQ=255) gtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAAc < 1:892104‑M1/11‑1 (MQ=255) attctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactcccaacccagtaaatactgttgttacaaggtttctaTGTATCCAAACTg < 1:748693‑M1/13‑1 (MQ=255) attctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTAtccaaaatg < 1:245944‑M1/13‑4 (MQ=255) ttctcatttgttagaagaaaaatttaatgaagaggacaaacaagaatgtagaattttagaaagtatgtaatttagggacccattagcgactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTgg < 1:484805‑M1/14‑1 (MQ=255) ttctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTgg < 2:631779‑M1/14‑1 (MQ=255) catttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACAggagaa < 2:937508‑M1/18‑2 (MQ=255) aTTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACtttt < 1:848687/141‑1 (MQ=255) atcAAATTTATTAGTAGTTTGTGCACTAACCGACAAGAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAAc < 2:841444/139‑1 (MQ=255) agaagaaaaatttaatgaagaggacaaaaaaacacctaaaattttagaaagtatgtaatttagggaaccataaggcgctacaaacccaataaaaactgttgttataagatttctaTGTATCCAAACTGGAGACATTTAACa < 2:877798‑M1/26‑1 (MQ=255) agaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTATATCCAAACTGGAGACTTTTAACa < 2:610392‑M1/26‑1 (MQ=255) agaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacaaatcagggactccaaaaccaataactactgttgttacaaggtttctaTATATCCAAACTGGTGACTTttaaaa < 2:280790‑M1/26‑3 (MQ=255) agaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATaa < 1:69459‑M1/29‑1 (MQ=255) aaTTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATaa < 2:563180/141‑1 (MQ=255) aTTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATaaa < 1:1076150/141‑1 (MQ=255) aatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGCCTTTTAACATAAAATTa < 1:1039346‑M1/34‑1 (MQ=255) tttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACt < 2:902758‑M1/36‑1 (MQ=255) acgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATc > 1:124736‑M1/102‑141 (MQ=255) aGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATc < 1:795443/141‑1 (MQ=255) aGTTGGTGCACGTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATCTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATc < 1:742362/141‑1 (MQ=255) gaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCAt > 2:245944‑M1/100‑141 (MQ=255) agaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTc < 1:76228‑M1/44‑1 (MQ=255) tGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCaa < 1:186847/141‑1 (MQ=255) ggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccatgagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCaaa < 2:929358‑M1/47‑1 (MQ=255) gCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCaaa < 1:545849/141‑1 (MQ=255) gCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCaaa < 1:217127/141‑1 (MQ=255) aCTTACTGACAATAGTGCCAACGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGgggcaatataaacgcgctgatttaatcggacaatc < 1:837406‑M1/141‑36 (MQ=255) aaaaaaaacaactaaaattttagaaagtttgtaatttagggacccattagggactccaaacccaataagtactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAg > 2:416349‑M1/92‑141 (MQ=255) ttACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCTTTCAAAAAGt > 2:1086905/1‑141 (MQ=255) ttACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGt > 2:53795/1‑141 (MQ=255) ttACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTGTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGt > 1:793920/1‑141 (MQ=255) aaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTaaa < 2:267321‑M1/54‑1 (MQ=255) tAGTGCCAAAGCCGAATCTATGAAAGATGATACTGATTTGAAGTAAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATACAAACTGGAGACTTTTAACATGAAATTACTTATCATTCAAAAAGTAAAACAGCaa > 2:604363/1‑140 (MQ=255) tAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCat < 1:411499/141‑1 (MQ=255) gTGCCGAAGCCGAATCTAAGGAAGATGTTACTGATTTGGAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataa < 2:290007/141‑1 (MQ=255) tGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataat > 1:909221/1‑141 (MQ=255) aaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataat > 1:94688‑M1/78‑141 (MQ=255) aattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAGACAGCataata < 1:301360‑M1/65‑1 (MQ=255) aattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGcataatt < 1:905042‑M1/65‑2 (MQ=255) aatcttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataata > 2:323861‑M1/77‑141 (MQ=255) aaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTACAACAGCATAAAATAAAGGtt < 2:63914‑M1/73‑1 (MQ=255) gAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGttt > 2:1001827/1‑141 (MQ=255) aTCTAAGTAAGATGATACTCATTTGAAGTTAGTGAGTCATAACGTTCATTTGTTATCGACCGTTTTGTATCCAAACCGGAGACTTTTGACATAAAATTACTTATCATTCAAAATGTAAAACAGCATAATATCAAGGTTtat < 1:879689/141‑1 (MQ=255) aTCTAAGAAAGATGCTTCTGATTTGAAGTTAGTTAGTCATAACGTTTATACGTGATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTtat < 1:383375/141‑1 (MQ=255) aTCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGAACGTTTTGAATCCAAACTGGAGACTTTTGACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTtat < 1:218379/141‑1 (MQ=255) tAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAAc < 2:310560/141‑1 (MQ=255) gtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACt > 1:454163‑M1/62‑141 (MQ=255) agaaagaTGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCACAAAGTAAAACAGCATAATATCAAGGTTTATAACtt > 1:629451/1‑141 (MQ=255) aagaTGATACTTATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttat < 2:894538/141‑1 (MQ=255) gacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatcattat < 2:262524‑M1/90‑1 (MQ=255) acccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatcattatc > 1:986429‑M1/51‑141 (MQ=255) tGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaat < 1:261947/141‑1 (MQ=255) tagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaataat < 1:457475‑M1/97‑1 (MQ=255) tagggactccaaacccaataaatactgttgttacaaggaccctaTGTATCCAAACTGGAGACATTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAAGCTTATAACTTTATCATTATcaataaa < 2:1027718‑M1/97‑2 (MQ=255) tccaaatccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAGATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCat > 2:823692‑M1/38‑141 (MQ=255) tccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCat < 2:609681‑M1/104‑1 (MQ=255) tagttagtCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCata < 1:131347/141‑1 (MQ=255) tagttagtCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCata < 1:790061/141‑1 (MQ=255) tagttagtCATAACGTTTATATGTTATCGACCGTTTTAGATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTAGCATTATCAGTAATACCTCata < 1:571953/141‑1 (MQ=255) aaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCCtata > 2:765724‑M1/35‑141 (MQ=255) aaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTAAtata < 2:548365‑M1/107‑1 (MQ=255) aacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATACCTTTATCATTATCAATAATCACTCATataa < 2:876979‑M1/108‑1 (MQ=255) aacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataa < 1:622989‑M1/108‑1 (MQ=255) gtCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataaaat > 2:992717/1‑141 (MQ=255) cATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGTCTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTCTAACTTTATCATTATCAATAATACTTAATataaaataa > 2:261212/1‑141 (MQ=255) cATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAATTTACTTATCATACAAAAAGTAAAACAGCATAATATACAGGTTTCTAACTTTATCATTATCAATAATACCTAATataaaataa > 2:752484/1‑141 (MQ=255) aaaCGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATAtaaaataaaa < 1:242527/140‑1 (MQ=255) aatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTCTAACATAAAATTAATTATCATTCAAAAAGTAAAACAGCATGACAACAAGGTTTATAACTTTAACATTATCAATAATACCTCATATAAAATAAAAtt < 2:606418‑M1/117‑1 (MQ=255) actgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAtttta > 2:21192‑M1/22‑141 (MQ=255) ctgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttag < 1:983574‑M1/121‑1 (MQ=255) tataTGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagg < 1:331899/141‑1 (MQ=255) gttgttacaaggttcctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttaggg > 1:273673‑M1/19‑141 (MQ=255) tatGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATCCCTCATATAAAATAAAAttttaggga > 1:327074/1‑141 (MQ=255) tGTTATCGACCGTTTTGTATCCAAACTGTAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCAGATAAAATAAAAttttagggact < 2:118120/141‑1 (MQ=255) ttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactt > 1:452364‑M1/15‑141 (MQ=255) gtacaaggtttctaTGTATCCAAACGGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactt > 1:56503‑M1/15‑141 (MQ=255) gTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAGCAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactt < 1:860162/141‑1 (MQ=255) caaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggacttttt < 1:977173‑M1/130‑1 (MQ=255) gACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagg < 1:341604/141‑1 (MQ=255) cGTTTTGTATCCAAAGTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggac > 1:821263/1‑141 (MQ=255) cGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggac > 2:864456/1‑141 (MQ=255) cGTTTTGTATCCAAACTGGAAACTTTTAACATAAAATTACTTATCATACAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATAATCAAAACAACCTCATATAAAATAAAAtcttaggaacgttttaaggaa > 2:163015/1‑140 (MQ=255) cGTTTTGTACACAAACTGGAGACTATTAACATCAATTGACAAATCATTCAAATTAAAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggac > 1:809817/1‑141 (MQ=255) ttttGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATtttagggactttttagggactt > 2:838495/1‑141 (MQ=255) ttttGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATtttagggactttttagggactt > 2:828373/1‑141 (MQ=255) | AAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTAA > USA300TCH1516_ALE/2085156‑2085436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |