BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	37094 =	98 (1.270)	9 (0.130)	4/240	NT	10.2%	intergenic (+118/‑719)	USA300HOU_RS14915/ugpQ_1	hypothetical protein/Glycerophosphodiester phosphodiesterase, cytoplasmic
*	?	USA300TCH1516_ALE	37188 =	68 (0.950)	9 (0.130)	4/240	NT	10.2%	intergenic (+212/‑625)	USA300HOU_RS14915/ugpQ_1	hypothetical protein/Glycerophosphodiester phosphodiesterase, cytoplasmic

Only 100 of 103 total aligned reads displayed.

TGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAAGAGGTACGTTAA  >  USA300TCH1516_ALE/37050‑37328

tGATTTTTTAAAGTTTACAGTGATATGCTTATGTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGtt                                                                                                                                            <  1:527877/141‑1 (MQ=255)

    tttttAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGtga                                                                                                                                        >  2:748414/1‑139 (MQ=255)

     ttttAAAGTTTACATGGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAAt                                                                                                                                       <  1:219045/141‑1 (MQ=255)

       ttAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAAttt                                                                                                                                     <  2:454846/141‑1 (MQ=255)

       ttAAAGTTTACAGGGATATGCTTATTTTTTTATCTTACGTTTTTGTACGTGCATGGTTGCCTCGGGGTATGGCCCGCGCTGTCAGGCTCACTGAAATACTATTCCCTCATGCGTCAGCACCTACAAAATTGGTTGTAAttt                                                                                                                                     <  2:388873/141‑1 (MQ=255)

       tcaaaGTTTACTGTGATAGTCTTATTTTTTTATGCTACGTGTTTGTACGTGCACGCTTGCCTAGGGGTATGGCTCCAGCCCTGAGCCACTCGCACATATTATTCCCTCAGGCGTCAGCACTTACGAAATCGGTTGTAAttt                                                                                                                                     <  2:388975/139‑1 (MQ=255)

        tAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAAtttt                                                                                                                                    <  1:672612/141‑1 (MQ=255)

         aaaGTTTACAGTGATATGCTTATTTTTTTTTTTTTTTTTTTTGTACGTGCATGCTTGCCTAGTGGTATGGTTCGAGCCATTAGTCTCTCGCACCTACTCTTCCCTCAGGCGTTAGCACTTTCAAAATCGGTTGTAAttttt                                                                                                                                   >  2:726152/1‑140 (MQ=255)

          aaGTTTACGGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCa                                                                                                                                  <  2:424783/141‑1 (MQ=255)

          aaGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTACAGACATGACCCGAGCCATTAGGCTCTCGCACATACTATTCCCTCCACCGTCAGCACTTACAAAATCGGTTGTAATTTTCa                                                                                                                                  >  2:453077/1‑141 (MQ=255)

           aGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTTGTGCGAACAAGACTCCATGCCCTCAGGCGTCAGCACTTACAAACTCGGGTGTAATTGTCAt                                                                                                                                 >  1:178635/1‑141 (MQ=255)

                aCAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTta                                                                                                                            <  2:685473/141‑1 (MQ=255)

                 cAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTtat                                                                                                                           <  1:838774/141‑1 (MQ=255)

                    ggATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACg                                                                                                                        <  1:152343/140‑1 (MQ=255)

                     tatacGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGc                                                                                                                       <  1:769491/140‑1 (MQ=255)

                     gATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGc                                                                                                                       <  2:163576/141‑1 (MQ=255)

                       tatGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCAt                                                                                                                     <  1:746649/141‑1 (MQ=255)

                         tGCTTATTTTTTTATCTTACGATTTTATACGTGCATGCTGGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTc                                                                                                                   <  2:405025/141‑1 (MQ=255)

                          gCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCt                                                                                                                  <  1:882546/141‑1 (MQ=255)

                              aTTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACt                                                                                                              <  1:618152/141‑1 (MQ=255)

                               tttttttATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTg                                                                                                             <  2:388239/141‑1 (MQ=255)

                                 tttttATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTgag                                                                                                           <  1:808480/141‑1 (MQ=255)

                                 tttttATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTgag                                                                                                           <  1:176637/141‑1 (MQ=255)

                                   tttATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGAt                                                                                                         >  1:873349/1‑141 (MQ=255)

                                   tttATCTCACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGAt                                                                                                         <  2:666181/141‑1 (MQ=255)

                                       tCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATtata                                                                                                     <  1:278916/141‑1 (MQ=255)

                                       tCTTACGATTTTGTACGGGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATtata                                                                                                     <  2:368561/141‑1 (MQ=255)

                                           aCGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCCTTCTTACTGAGATTATACtaa                                                                                                 <  1:486930/141‑1 (MQ=255)

                                            CGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACtaat                                                                                                >  2:386697‑M1/1‑141 (MQ=255)

                                             cATTTTGCTCGGGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGGCTCTCGCACAGACTATTCCCTCAGGCGTCAGCACTTACAGAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACtaata                                                                                               >  2:575593‑M1/2‑141 (MQ=255)

                                             GATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACtaata                                                                                               >  1:804110‑M1/1‑141 (MQ=255)

                                             GATTTTGTACGGGCATNCTTGCCTAGGGGTATGGCGCGAGCCATTAGTCTCTCGGACATACTATTCCCTCAGGCGTCAGCACTTACAAAATTGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACtaata                                                                                               >  1:907691‑M1/1‑141 (MQ=255)

                                                TTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATAATAATAaga                                                                                            <  2:847603‑M1/141‑1 (MQ=255)

                                                  TGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCCGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAgg                                                                                          <  2:325660‑M1/141‑1 (MQ=255)

                                                  TGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGCGATTATACTAATAAGAgg                                                                                          <  1:566400‑M1/141‑1 (MQ=255)

                                                   tTACCTGCATGCTTGGCTTGGGGTATGGCTCGATCCATTAGGCTCCCGCACATACTATTTCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGa                                                                                         >  2:131766‑M1/2‑141 (MQ=255)

                                                   GTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGa                                                                                         >  1:53036‑M1/1‑141 (MQ=255)

                                                   GTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGa                                                                                         >  1:835080‑M1/1‑141 (MQ=255)

                                                      cGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATa                                                                                      >  1:835349/1‑141 (MQ=255)

                                                      cGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCAATCAGGCGTCAGCACTTACAAAAACGGTTGTAGTTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATCAGAggcaaa                                                                                      >  1:423974/1‑137 (MQ=255)

                                                       gggCATGCTGGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTTGCACATACTATTCCCTCAGGCGTCAGCACGTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAg                                                                                     <  2:792800/139‑1 (MQ=255)

                                                         gCATGCTTGCCCAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTa                                                                                   <  1:676707/141‑1 (MQ=255)

                                                          ctgacgcctgagggaatagtatgtgcgagagactaatggctcgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTaa                                                                                  >  2:52176‑M2/81‑141 (MQ=255)

                                                          ctgacgcctgagggaatagtatgtgcgagagactaatggctcgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTaa                                                                                  >  2:52214‑M2/81‑141 (MQ=255)

                                                          ctgacgcctgagggaatagtatgtgcgagagactaatggctcgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTaa                                                                                  >  1:433032‑M2/81‑141 (MQ=255)

                                                          cATGCTTGCCTAGGGGTATGGCTCGAGCGATTAGTCTCTCGGCCATACTATTCGCTCAGGGGTCAGCAAATCCACAATCGGTTGTACGTTTCATTTTTATACGCATTCCTACGGAGATGGTACTACTCCGAGGAATAGTaa                                                                                  <  2:369796/141‑1 (MQ=255)

                                                          cATGCTTGCCTAGCGGTACGGCTCGAGCCATTAGTCTCTCGCACATACTACTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTaa                                                                                  <  1:81401/141‑1 (MQ=255)

                                                           ttccTTTCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTaaa                                                                                 <  2:229932/138‑1 (MQ=255)

                                                           aTGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTaaa                                                                                 <  2:44031/141‑1 (MQ=255)

                                                            gacgcctgagggaatagtatgtgcgagagactaatggctcgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTaaaa                                                                                >  1:386018‑M2/79‑141 (MQ=255)

                                                                  tgagggaatagtatgtgcgagagactaatggctcgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATCGTAAAAGCAAtt                                                                          >  2:263727‑M2/73‑141 (MQ=255)

                                                                  tgagggaatagtatgtgcgagagactaatggctcgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAAtt                                                                          >  2:243935‑M2/73‑141 (MQ=255)

                                                                  ccTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTACCTCAGGCGTCCGCACTTACCGAATAGGACGTAATTATCATTTTTATACCCATCCTTACTGATATTACACTAATAAGAGGAATAGTAAAAGCAAtt                                                                          >  2:785566/1‑141 (MQ=255)

                                                                       gggTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAg                                                                     >  1:2028/1‑141 (MQ=255)

                                                                           aTGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTaaa                                                                 >  1:729681/1‑141 (MQ=255)

                                                                            tGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTaaaa                                                                >  2:858209/1‑141 (MQ=255)

                                                                              gCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAACGAAATTCTAAGTAAAAtt                                                              >  2:337982/1‑141 (MQ=255)

                                                                              gCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAAtt                                                              >  2:80845/1‑141 (MQ=255)

                                                                                tCGAGCCATTAGTCTCTCGCACATACTATTCCATCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGc                                                            >  2:569830/1‑141 (MQ=255)

                                                                                 cGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTTAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCa                                                           <  1:785566/141‑1 (MQ=255)

                                                                                      cATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATaa                                                      >  1:394793/1‑141 (MQ=255)

                                                                                       aTTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAag                                                     >  1:397280/1‑141 (MQ=255)

                                                                                        ttAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAaga                                                    >  1:194002/1‑141 (MQ=255)

                                                                                         tAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAagag                                                   >  1:43876/1‑141 (MQ=255)

                                                                                           gTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCCTTCTTACGGAGATTATACTAATACGAGGAATAGTAGAAGCCAGTCTAAGTAAAGTTGCAGATAAGAGGt                                                 >  1:537650/1‑141 (MQ=255)

                                                                                           gTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGt                                                 >  1:642087/1‑141 (MQ=255)

                                                                                           gTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATAGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGGTTATACTAATAAGCGGGATAGTAAAGGCAATTCTAAGTAAAATTGCAGATAAGAGGt                                                 >  1:53196/1‑141 (MQ=255)

                                                                                           gTCTCTCGCACATACTATTCCCGCAGGCCTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGt                                                 <  1:449299/141‑1 (MQ=255)

                                                                                                 cGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAATGCAATTCTAAGTGAAATTGCAGATAAGCGGTTTTTTa                                           >  1:751198/1‑141 (MQ=255)

                                                                                                   cgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAGTTGCAGATAAGAGGTTTGTTaaa                                         <  2:433032‑M2/102‑1 (MQ=255)

                                                                                                   cgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTaaa                                         <  1:52176‑M2/102‑1 (MQ=255)

                                                                                                   cgagccatacccctaggcaagcatgcacgtacaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTaaa                                         <  1:52214‑M2/102‑1 (MQ=255)

                                                                                                   cacaTACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTaaa                                         <  1:726152/141‑1 (MQ=255)

                                                                                                   cacaTACCATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTaaa                                         <  2:686169/141‑1 (MQ=255)

                                                                                                    ccaTACTATTCCCTCAGGCGCCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTaaaa                                        <  1:896450/140‑1 (MQ=255)

                                                                                                       tACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCa                                     >  1:290730/1‑141 (MQ=255)

                                                                                                       tACTATTCCCTCAGGAGTCAGCACTTACAAAATCGTTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCa                                     <  2:328767/141‑1 (MQ=255)

                                                                                                        aCTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATAAGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAcagcag                                    >  2:686827/1‑141 (MQ=255)

                                                                                                        aCTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATAAGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAg                                    >  1:409863/1‑141 (MQ=255)

                                                                                                           aTTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTtc                                 <  2:729681/141‑1 (MQ=255)

                                                                                                           aTTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTtc                                 <  1:534960/141‑1 (MQ=255)

                                                                                                              cccTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCa                              <  2:748474/141‑1 (MQ=255)

                                                                                                                   aGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTaaa                         >  2:727087/1‑141 (MQ=255)

                                                                                                                   aGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTaaa                         >  1:286222/1‑141 (MQ=255)

                                                                                                                   aGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTaaa                         <  2:256959/141‑1 (MQ=255)

                                                                                                                      cGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAAtt                      >  2:843018/1‑141 (MQ=255)

                                                                                                                        tCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTAc                    <  1:779868/141‑1 (MQ=255)

                                                                                                                         cAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACa                   >  1:567697/1‑141 (MQ=255)

                                                                                                                         cAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGGTTGTTAAAAGCAGTTCTCAGTAAAATTACa                   >  1:568061/1‑141 (MQ=255)

                                                                                                                           gCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGa                 >  2:370295/1‑141 (MQ=255)

                                                                                                                            cACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGAt                <  2:78681/141‑1 (MQ=255)

                                                                                                                               ttACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAag             <  1:899709/141‑1 (MQ=255)

                                                                                                                                 acaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGGTAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAagag           >  1:829039‑M2/10‑141 (MQ=255)

                                                                                                                                 acaaaatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAagag           <  1:771299‑M2/132‑1 (MQ=255)

                                                                                                                                     aatcgGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAAGAGGtag       >  1:625561‑M2/6‑140 (MQ=255)

                                                                                                                                         gGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAAGAGGTACGTTa   <  2:43876‑M2/140‑1 (MQ=255)

                                                                                                                                         gGTTATTATTTACATTTTTATACTCATTCTAACTGAGAGTATACTAATAAGAGTAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATGACAGATAAGAGGTACGTTa   <  2:414219‑M2/140‑1 (MQ=255)

                                                                                                                                         gGTCGTAATTTTCATTTTTATACGCATTCTTATTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAAGAGGTACGTTa   <  2:634032‑M2/140‑1 (MQ=255)

                                                                                                                                          gTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAAGAGGTACGTTaa  <  2:173090/141‑1 (MQ=255)

                                                                                                                                          gTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAAGAGGTACGTTaa  >  1:599920/1‑141 (MQ=255)

TGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGCCATTAGTCTCTCGCACATACTATTCCCTCAGGCGTCAGCACTTACAAAATCGGTTGTAATTTTCATTTTTATACGCATTCTTACTGAGATTATACTAATAAGAGGAATAGTAAAAGCAATTCTAAGTAAAATTGCAGATAAGAGGTTTGTTAAAAGCAGTTCTCAGTAAAATTACAGATAAGAGGTACGTTAA  >  USA300TCH1516_ALE/37050‑37328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.