New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 20439 =450 (1.240)7 (0.020) 7/248 NT 1.7% coding (632/675 nt) USA300HOU_pUSA300HOUMR0027 IS431mec transposase
?CP000731 20463 = 371 (1.070)coding (608/675 nt) USA300HOU_pUSA300HOUMR0027 IS431mec transposase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 443 total aligned reads displayed.

TCATATTAAATGGCTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAA  >  CP000731/20323‑20603
                                                                                                                                            |                                                                                                                                            
tCATATTAAATGGCTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGt                                                                                                                                              <  1:119352/141‑1 (MQ=255)
tCATATTAAATGGCTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGt                                                                                                                                              <  2:23538/141‑1 (MQ=255)
tCATATTAAATGGCTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGt                                                                                                                                              <  2:887264/141‑1 (MQ=255)
  atatTAAATGGCTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTc                                                                                                                                            <  1:359765/141‑1 (MQ=255)
    atTAAATGGCTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATAACAGGTCATTGTTCGTTTTACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCtt                                                                                                                                          >  1:451694/1‑141 (MQ=255)
    aatAAATGGCGGGGTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATGTATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAACTCCGTAGATCTGAAGAGACCTACGGTTCtt                                                                                                                                          >  2:693870/3‑141 (MQ=255)
       aaaTGGCTGGTTCTGTTGCAAAGTAAAATATATAGCTAATCACTAATATACCATGTCAGTGTTCGTTTAACTTGCCAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCttttt                                                                                                                                       <  1:654700/141‑1 (MQ=255)
        aaTGGCTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTta                                                                                                                                      <  2:820016/141‑1 (MQ=40)
             cTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATag                                                                                                                                 >  2:286614/1‑141 (MQ=37)
               ggTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGTAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATagag                                                                                                                               <  2:504105/141‑1 (MQ=21)
               ggTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATagag                                                                                                                               <  1:96752/141‑1 (MQ=35)
               ggTTCCGTTGCAAAGTAAAAAATATGGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATagag                                                                                                                               <  1:212497/141‑1 (MQ=25)
                  tCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGt                                                                                                                            >  2:359604/1‑141 (MQ=34)
                   cTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTa                                                                                                                           <  2:893913/141‑1 (MQ=35)
                    tGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTaa                                                                                                                          >  1:329298/1‑141 (MQ=35)
                    tGTTGCAAAGTAAAAAATATAGCTAAGCACTGATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTGGTGGCATGGGGAAAATCCGTAGATCTGGAGCGACCTACGGTTCTTTTTATATGGAGCGTaa                                                                                                                          >  2:567065/1‑141 (MQ=11)
                     gTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTaaa                                                                                                                         <  1:720107/141‑1 (MQ=35)
                     gTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTaaa                                                                                                                         >  2:293611/1‑141 (MQ=34)
                      ttGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAAt                                                                                                                        >  1:91435/1‑141 (MQ=35)
                      ttGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAAt                                                                                                                        >  1:471465/1‑141 (MQ=35)
                               aaacaaTATAGCTAATCACTAATATGTCATGTCAGTGTTCGTTTAACTTACTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGCGACCTCAGGTTGTATTTATATAGAGCGTAAATACATACaaa                                                                                                               >  2:178117/1‑140 (MQ=11)
                               aaaaaaTATAGCTAATCACTAATATATAATGTCAGTGTTCGTTTACATTGCTACAACGATGGTAATTTCGTCGTTTGTTTGAGGTCCGTAGTTTTGAGGAGACCGACGGTTCTTTTTATATGGAGCGTAAATACATTTaaa                                                                                                               >  1:186953/1‑140 (MQ=2)
                                   aaTATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCt                                                                                                           >  2:796373/1‑141 (MQ=38)
                                      ataGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTTGCATGGGGAAAATCCGTAGATCTGAACAGACCTACGGTTCTTTTGATATAGAGCGTAAATACATTAAATACAtttt                                                                                                        >  2:200694/1‑141 (MQ=11)
                                      ataGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCtttt                                                                                                        <  1:40924/141‑1 (MQ=38)
                                       taGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTa                                                                                                       >  2:312171/1‑141 (MQ=38)
                                         gCTAATCACTAATATATCGTGTGAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACTTTTTaaa                                                                                                     >  2:474651/1‑141 (MQ=255)
                                         gCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTaaa                                                                                                     <  1:277911/141‑1 (MQ=37)
                                         gCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTaaa                                                                                                     >  1:26131/1‑141 (MQ=38)
                                         gCTAATCACTAATATATCATGTCAGTGTTAGTTTAAATTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTaaa                                                                                                     >  2:447393/1‑141 (MQ=255)
                                          cTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAg                                                                                                    <  1:807849/141‑1 (MQ=38)
                                            aaTCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTACTTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTGCTTGTTATATAGAGCGTAAATACATACAATACCTTTTAAAgaa                                                                                                  >  2:855160/1‑139 (MQ=255)
                                                 cTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCtt                                                                                             >  2:92182/1‑141 (MQ=37)
                                                   aaTATATCATGGCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTg                                                                                           <  2:546908/141‑1 (MQ=37)
                                                      atatCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATGTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTGAATACATTCAATACCTTTTAAAGTATTCTTTGCCg                                                                                        >  1:705788/1‑141 (MQ=255)
                                                        atCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTa                                                                                      <  2:260250/141‑1 (MQ=255)
                                                        atCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTa                                                                                      <  2:251776/141‑1 (MQ=40)
                                                         tCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATGCAATACCTTTTAAAGTATTCTTTGCCGTAt                                                                                     >  2:596247/1‑141 (MQ=255)
                                                           aTGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTg                                                                                   >  1:715334/1‑141 (MQ=40)
                                                           aTGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTg                                                                                   >  2:67205/1‑141 (MQ=40)
                                                           aTGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTg                                                                                   >  2:303211/1‑141 (MQ=40)
                                                              tCAGTGTTCGTTTAACTTGCTAGAATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGGAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATa                                                                                <  1:141195/141‑1 (MQ=255)
                                                               cAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATAc                                                                               <  2:702105/141‑1 (MQ=255)
                                                               cAGTGTTCGTTTAACGTGCTAGCATGGTGCTAATCTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTCTTATATAGAGCGTCAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATAc                                                                               <  1:572894/141‑1 (MQ=14)
                                                                aGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACt                                                                              >  1:543837/1‑141 (MQ=40)
                                                                aGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACt                                                                              >  2:83426/1‑141 (MQ=40)
                                                                 gttttCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACtt                                                                             <  1:302308/138‑1 (MQ=255)
                                                                 gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACtt                                                                             >  1:595317/1‑141 (MQ=40)
                                                                 gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCAGGGGGACAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTGAAGTATTCTTTGCCGTATTGATACtt                                                                             >  1:366618/1‑141 (MQ=255)
                                                                   gtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTGTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTg                                                                           <  1:129525/141‑1 (MQ=255)
                                                                    ttCGTTTAACTTGCTTGCATGATGCTAATTTCGTGGCATGGGGAAAATCCTTAGATCTGAAGTGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGa                                                                          <  2:615283/141‑1 (MQ=255)
                                                                    ttCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGa                                                                          <  2:369963/141‑1 (MQ=40)
                                                                     tCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATAATTTGat                                                                         >  2:219329/1‑141 (MQ=255)
                                                                         ttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCt                                                                     <  1:309221/141‑1 (MQ=40)
                                                                             cTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACGTGTTGAATTATTCTTTGCCGTATTGATACTTTGCTATCTTGtc                                                                 >  1:639060/1‑141 (MQ=14)
                                                                             cTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTATTTGCCGTGTTGATACTTTGATATCTTGtc                                                                 >  2:465745/1‑141 (MQ=255)
                                                                              ttGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGtct                                                                <  2:11995/141‑1 (MQ=255)
                                                                               tGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTACATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGtctt                                                               <  2:522028/141‑1 (MQ=255)
                                                                                gCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTAGtcttt                                                              >  1:17229/1‑141 (MQ=255)
                                                                                 caaGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGtctttc                                                             <  2:351128/139‑1 (MQ=255)
                                                                                 cTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGCAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCACTACCTTTTAAAGTATTCTTGGCCGTATTGATGCTTTGATATCTTGtctttt                                                             >  2:165836/1‑140 (MQ=255)
                                                                                 cTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATTTTGtctttc                                                             >  2:328361/1‑141 (MQ=255)
                                                                                  tAGGATGATGCTAATTTCGGGGCGTGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGtctttct                                                            <  2:861921/141‑1 (MQ=255)
                                                                                    gCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTTTTCTTTGCCGTATTGATACTTTGATATCTTGtctttcttt                                                          >  2:628132/1‑140 (MQ=255)
                                                                                    attgaatgtatttacgctctatataaaaagaaccgtagatctgaagagacctacggTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTa                                                          >  2:67736‑M2/57‑141 (MQ=255)
                                                                                       tgatgCTAATTTCGTGGCATGGGGAAAGTCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACtt                                                       >  1:885780/1‑141 (MQ=255)
                                                                                       tgatgCTAATTTCGTGGCAGGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACtt                                                       >  1:500180/1‑141 (MQ=255)
                                                                                        gatgCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACttt                                                      <  1:856022/141‑1 (MQ=255)
                                                                                          tgCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGTTCCTTTGATATCTTGTCTTTCTTACTTTaa                                                    >  2:747522/1‑141 (MQ=255)
                                                                                             tAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAatat                                                 >  2:844030/1‑141 (MQ=40)
                                                                                             tAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTCCTTACTTTAatat                                                 >  2:929408/1‑141 (MQ=255)
                                                                                             tAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTATATAGAGCGTAAATACATTCAATACCTATTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATg                                                >  1:393421/1‑141 (MQ=255)
                                                                                              aaTTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATg                                                >  2:582336/1‑141 (MQ=40)
                                                                                                 ttCGTGGCATGGGGAATGTCCGCAAATCTGAAGAGACCTACGGTTCTTTTTATATAGATCGTAAATACATTCAAGACCTTTTAAAGTATTCTTTGCCGTACTGATACTCCGCTTTCTAATCTGTCTTACTTTAATTTGACg                                             <  1:693870/141‑1 (MQ=14)
                                                                                                 ttCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACg                                             >  2:543132/1‑141 (MQ=40)
                                                                                                 ttCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACg                                             >  1:876804/1‑141 (MQ=40)
                                                                                                   cGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGt                                           <  2:151787/141‑1 (MQ=40)
                                                                                                     tGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGa                                         <  1:815027/141‑1 (MQ=255)
                                                                                                      ggCATGGGGGAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGAt                                        <  2:766155/141‑1 (MQ=255)
                                                                                                        cATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTAAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTTATATCTTGTCTTTCTTACTTTAATATGACGGTGATCt                                      >  1:771370/1‑141 (MQ=255)
                                                                                                          tGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTg                                    <  2:481729/141‑1 (MQ=40)
                                                                                                           ggggAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGc                                   <  1:683411/141‑1 (MQ=255)
                                                                                                                agaaccgtaggtctcttcagatctacggTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCtcagt                              >  1:508045‑M2/29‑139 (MQ=255)
                                                                                                                aaaTCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAAt                              >  2:907263/1‑141 (MQ=38)
                                                                                                                  aTCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGa                            <  1:100967/141‑1 (MQ=39)
                                                                                                                    CCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAgg                          >  1:8435‑M1/1‑141 (MQ=255)
                                                                                                                     cgtacttCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTGTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGt                         <  1:346766/135‑1 (MQ=255)
                                                                                                                     CGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGt                         >  1:603263‑M1/1‑141 (MQ=255)
                                                                                                                       TAGATCTGAAGAGACCTACGGTTCTTTTTATTTAGATCGTAAATATATTCAATACCTTTTAAAGTATTCTTTGCCGTATCGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTa                       >  1:4262‑M1/1‑141 (MQ=255)
                                                                                                                        aggtctcttcagatctacggTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTAt                      >  1:781988‑M2/21‑141 (MQ=255)
                                                                                                                         GATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTAtt                     >  2:384091‑M1/1‑141 (MQ=255)
                                                                                                                         GATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTAtt                     >  1:379480‑M1/1‑141 (MQ=255)
                                                                                                                           ccTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCa                   <  1:440470/140‑1 (MQ=38)
                                                                                                                            ctcttcagatctacggTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAg                  >  1:161376‑M2/17‑141 (MQ=255)
                                                                                                                             tGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCCCAATGGGGTTATTCAGa                 >  1:865149/1‑141 (MQ=255)
                                                                                                                              cttcagatctacggTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTCTTCTTTGCCGTATTGATACTTTGCTATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCACTGAGGTTATTCAGat                >  1:241283‑M2/15‑141 (MQ=255)
                                                                                                                                agagACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGatat              >  2:716951/1‑141 (MQ=38)
                                                                                                                                 gtggtctacggTTTGTTTTATAGTGGGCGGAAATACATTTAATACCTTTTAGAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATGTGATGGTGATCTTGCTCAATGAGGTTATTCAGATAtt             <  2:431078‑M2/130‑1 (MQ=255)
                                                                                                                                           gTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGCTATCTTGTCTTTCTTACTTTAATATGACGTTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACa   >  1:900383‑M2/2‑141 (MQ=255)
                                                                                                                                            ttCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACaa  <  1:286614/141‑1 (MQ=35)
                                                                                                                                            |                                                                                                                                            
TCATATTAAATGGCTGGTTCTGTTGCAAAGTAAAAAATATAGCTAATCACTAATATATCATGTCAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAA  >  CP000731/20323‑20603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.