| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 4381 | 10 (1.720) | 8 (0.000) | 7/264 | 0.4 | 0.42% | intergenic (+346/‑119) | USA300HOU_pUSA300HOUMR0006/cadR | hypothetical protein/cadmium binding protein |
| ? | NC_012417 | = 1975 | 3828 (1.070) | intergenic (+208/+118) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 257 total aligned reads displayed.
GTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCT > CP000731/4250‑4520 | aatcttaaatacgggttactttagatactatttattccaattgcTTTATTGACGTTGAGCCTCGGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑T‑‑‑TAAGTtttgtga > 2:339620‑M1/45‑137 (MQ=255) tacgggttactttagatactatttagtccaattgcTTTATTGACGTTGAGCCTCGGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAgg > 2:477020‑M1/36‑140 (MQ=255) acgggttactttagatactatttattccaattgcTTTATTGACGTTGAGCCTCGGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAggg > 1:699999‑M1/35‑140 (MQ=255) cgcttgtatgccgAAGAAATTTAGTGGTGTTGGGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATTTCGGCATAGAGTGAGCTATTAAGCCGACCATTCG‑‑‑T‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCA < 1:253016‑M1/134‑1 (MQ=255) tggcggaaaaaTTTATTGATTTTGATAA‑‑‑GAACCCTTAACTAAACTTGCAGACGGATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCa < 2:276493/134‑1 (MQ=11) attccaattgcTTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATATAGCa > 2:695665‑M1/12‑140 (MQ=255) tgcGAAAAAATTGATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTTAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTGGGGATTGTTAATGGTTCCTAGGCTCCACGTCAATAAAGCaa < 2:758728/138‑1 (MQ=11) agTTTATTGATGTTGAGAG‑‑‑GAACCCTTAACTAACCTTGCAGACGAATGGTGGCATAGCGTGGGCTATTAAGCCGCCCACTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATa > 2:109644‑M1/3‑140 (MQ=255) aacTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATa > 2:596030‑M1/4‑140 (MQ=255) cTTTAGTGATGTTGAGAA‑‑‑AAACCCTTAACTAAACTTGCAGATGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTACCGAGGCTCAACGTCAATAAAGCAATTGGAATaa > 2:768696‑M1/2‑140 (MQ=255) tgTATTGATTTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 2:92565‑M1/3‑140 (MQ=255) TTTATTTATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 2:934303‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTATCTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTTCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 2:601616‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTGAACTTGCAGACGAATGTCCGCATACGCAGTGTTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTAAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 1:29353‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCACTTGGAATaaa > 1:728050‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAGTaaa < 1:272994‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 1:88209‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 2:35650‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 2:181956‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGGTTAGGGCTTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAGTTGTAATaaa < 2:428264‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑AAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 1:211516‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTAG‑‑‑A‑‑‑CAAGTTTTTGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 1:942087‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAA‑‑‑GAACCATTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCCCAACGTCAATAAAGCAATTGGAATaaa < 2:16907‑M1/140‑1 (MQ=255) TTTATTGATGTTAAGAA‑‑‑GAAACCTTAACTAAACTTGCAGAAGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 2:29253‑M1/1‑140 (MQ=255) TTTAATGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGAATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 2:611251‑M1/140‑1 (MQ=255) TATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGCCGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATGGGAataaaaa < 2:324068‑M1/140‑3 (MQ=255) ATTGATGTTGAGAA‑‑‑GAACACTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTACGGGTTCCGAGGCTCACCGTCAATAAAGCAATTGGAATAaaggg < 1:582915‑M1/140‑3 (MQ=255) TTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCAGAGGCTGACCGCCGGTACAGCAATtggaatatatatt < 2:496321‑M1/140‑7 (MQ=255) aTGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATCAAttttctcgtcataaatgcgac > 2:724633‑M1/1‑119 (MQ=255) aaCCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACATCAATAAAttttctcggcataaatgcgtcgtctatttttt > 1:949346‑M1/1‑108 (MQ=255) tAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttc > 1:619779‑M1/1‑99 (MQ=255) ttGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatattt > 2:820727‑M1/1‑55 (MQ=255) cAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtttattttttattatcttcatgataatcatatttttc > 1:883564‑M1/1‑52 (MQ=255) aGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGTATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatca < 2:753842‑M1/140‑52 (MQ=255) tCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑TCTGCAAGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgcctattttttattatcttcatgataatcatatttttcttccatc > 1:14409‑M1/1‑45 (MQ=255) ggCATAGCGTGAGCTATTAAGCCGACCATTCGTCTG‑‑‑CAAGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctc > 2:185446‑M1/1‑43 (MQ=255) ggCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑TCTGCAAGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgncgtctattttttattatcttcatgctaatcatatttttcttccatcca > 1:849047‑M1/1‑43 (MQ=255) ttgctagtttagttaagggttcttctcaacatcaataaatttactcagcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcacaagcatcatctttataaaaaaaaaaaaa < 2:871588‑M1/135‑131 (MQ=255) ctgttagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaa < 1:957871‑M1/135‑131 (MQ=255) ctcccagtttagttaagggttcttctcaacatcaataaattttctcggcataaatccgtcgtctcttttttattaccttcatgctaatcatatttttcttccatctcgtcaaaaccatcatctttatagaaaaacaaaaa < 2:252464‑M1/135‑131 (MQ=255) gaaagtTTagttaagtgttcatctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagt < 2:784195‑M1/138‑133 (MQ=255) cAAGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagta < 1:928975‑M1/140‑134 (MQ=255) cAAGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagta < 1:80468‑M1/140‑134 (MQ=255) cAAGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagta > 1:56964‑M1/1‑7 (MQ=255) aaGTTTagttaagggttcttctcaacatcaataacttttctcggcataaatgcgtcgtgtattttttattatcttcatgataatcatatttttcttccatttcgtcaaaagcttcatctttatagaaaaacaaaaattaa > 2:237222‑M1/1‑6 (MQ=255) aaGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaa < 2:857086‑M1/140‑135 (MQ=255) aGTTTagttaatagttcttctcatgatcaataaattttctcggcataaatacgtcgtctattttttattatcttcatgataaccatatttttcctccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaag < 1:290677‑M1/140‑136 (MQ=255) aGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttctatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaag < 1:690765‑M1/140‑136 (MQ=255) aGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaag < 2:563289‑M1/140‑136 (MQ=255) aGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaag < 1:216154‑M1/140‑136 (MQ=255) aGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaag < 1:453510‑M1/140‑136 (MQ=255) aGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaag < 1:973446‑M1/140‑136 (MQ=255) aGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaag < 1:999080‑M1/140‑136 (MQ=255) aGTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaag < 1:764006‑M1/140‑136 (MQ=255) aGTTTagttaaggattcttcacaacatcaataaaatttctcggcataaatgcgtcgtatattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaacaagtaag > 1:444988‑M1/1‑5 (MQ=255) aGTCTagttaagggttcttctcaacgtcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatcttcatagaaaaacaaaaagtaag < 1:607448‑M1/140‑136 (MQ=255) ttttagtcaaggtctcttctcaacatcactaaattttctcgtcataaatgcgttctctattttttactatcttcatgataatcagatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 2:136109‑M1/139‑137 (MQ=255) tgttagttgagggttcttctcaatatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 2:671378‑M1/138‑137 (MQ=255) gTTTtgttaagggttctacccaacaacaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:507035‑M1/140‑137 (MQ=255) gTTTatttaagggttcttctcaagatcaatagattttctctgcctaaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaatcaaaaagtaagc < 2:70468‑M1/140‑137 (MQ=255) gTTTagttacgggttcttctcaacatcaataaattttctcggcataaatacgtcgtctattttttctcatctgcatgacaatcatattttttttccagctcgtcataagcatcatctttagagagaaacaaaaagtaagc < 1:750409‑M1/140‑137 (MQ=255) gTTTagttaaggtttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 2:70908‑M1/140‑137 (MQ=255) gTTTagttaaggtttcttatcaacataaataaattttctcggcataaatgcgtcgtctatattttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatcttaaaaaaaaaaaaaaaagtaagc < 2:244948‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctctacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:899021‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctccacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:172216‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcacaagcgggagctttatagaaaaacaaaaagtaagc < 1:485391‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaatcatcatctttatagaaaaacaaaaagtaagc > 1:759073‑M1/1‑4 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttctagaaaaacaaaaaataagc > 1:319684‑M1/1‑4 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaacgtaagc > 1:421330‑M1/1‑4 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:922189‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:3999‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:177751‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:905848‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:352574‑M1/140‑137 (MQ=255) gTTTagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgacaatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:105458‑M1/140‑137 (MQ=255) gTTTagttaagggttcttatcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttataaaaaaaaaaaaagtaagc < 2:269348‑M1/140‑137 (MQ=255) gTTTagttaagggtgcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:479143‑M1/140‑137 (MQ=255) gTTTagttaaggcttcttctcaacatcaataaattttctcggcataaacgcgtcgtctattttgtattatcttcatgataatcatatttttcttccatctcgtcacaagcttcatctttaaaaaaaaaaaaaaagtaagc < 2:630029‑M1/140‑137 (MQ=255) gTTTaggtaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 1:283410‑M1/140‑137 (MQ=255) gTTGagttaagggttcttctccacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagc < 2:80778‑M1/140‑137 (MQ=255) tttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagca < 1:868060‑M1/140‑138 (MQ=255) tttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagca > 1:564410‑M1/1‑3 (MQ=255) tttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagca < 1:394314‑M1/140‑138 (MQ=255) tttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatattttccttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagca < 1:797948‑M1/140‑138 (MQ=255) ttagttcagggttcttctcaacaccaataaattttctcggcataaatgcgtcgtctattttttagtatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaa < 1:361136‑M1/140‑139 (MQ=255) ttagttaagtgttcttctcaacaacaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaa < 2:910882‑M1/140‑139 (MQ=255) ttagttaagggttcttttcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaaccaaaattaagcaa < 2:118519‑M1/140‑139 (MQ=255) ttagttaagggttcttctcaacatcaatacattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaa < 1:113697‑M1/140‑139 (MQ=255) ttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttttagaaaaacaaaaagtacacaa > 2:65844‑M1/1‑2 (MQ=255) ttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaa > 1:587473‑M1/1‑2 (MQ=255) ttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagaatcatctttatagaaaaacaaaaagtaagcaa < 1:201055‑M1/140‑139 (MQ=255) ttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccacctcgtcaaaagcatcatctttatagaaaaacaaaaagtaaacaa > 1:12697‑M1/1‑2 (MQ=255) ttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcctccaccccgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaa < 1:529835‑M1/140‑139 (MQ=255) ttagttaagggttcttctcaacatcaataaaatattgcggcataaatgcgccgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagttagcaa > 2:457832‑M1/1‑2 (MQ=255) ttaggtaagggtgcttctgaacatcaataatgtgtctcggaatgaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccagctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaa < 2:384046‑M1/140‑139 (MQ=255) tagttaatggatcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaac < 1:242081‑M1/140‑140 (MQ=255) tagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaac < 1:807245‑M1/140‑140 (MQ=255) tagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaac < 1:817565‑M1/140‑140 (MQ=255) tagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaac < 1:933769‑M1/140‑140 (MQ=255) tagttaagggatcttatcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaac < 1:553794‑M1/140‑140 (MQ=255) | GTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAA‑‑‑GAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑A‑‑‑CAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCT > CP000731/4250‑4520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |