New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 1084764	NA (NA)	4 (0.090)	3/264	NT	NA	noncoding (83/86 nt)	REP95 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP95 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913_3_bme_pgi	3098440 =	NA (NA)					noncoding (28/121 nt)	REP217 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP217 (repetitive extragenic palindromic) element; contains 3 REP sequences

TTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAA  >  NC_000913_3_bme_pgi/1084617‑1084912                                                                                                                                                    |                                                                                                                                                     ttattTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTTATTCGACGCTTGGGCTTCTAAACATACCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTAACGCCGCATCCg                                                                                                                                                     >  1:401213/1‑149 (MQ=255)    tttCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCg                                                                                                                                                  >  2:785324/1‑149 (MQ=255)    tttCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGGTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCg                                                                                                                                                  >  2:881642/1‑149 (MQ=255)      tCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGAt                                                                                                                                                <  1:785324/149‑1 (MQ=255)           aGCGCGTTATTGAGGGTTTAATGGTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCGTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGc                                                                                                                                           <  1:522643/149‑1 (MQ=255)            gcgcGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTAGCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCa                                                                                                                                          <  1:330256/149‑1 (MQ=255)             cgcgTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATACCTACAATCAGTGAGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCAc                                                                                                                                         >  1:24519/1‑149 (MQ=255)             cgcgTTAGTGCGGGTTTAATGTTTTTAGGCGGTTAAGGCATTTGTGCTCAGTTGCCTGATGCGTCGCTTGCGCGTCTTATCATGCCTACAAGCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCAc                                                                                                                                         <  1:207432/149‑1 (MQ=37)                 ttATTGGGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgat                                                                                                                                     <  2:54220/149‑1 (MQ=255)                 ttATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgat                                                                                                                                     <  1:722645/149‑1 (MQ=255)                            ttAATGTTTTTAGGCGGATAAGGCATTTGTACGCAGATACCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTTAATCAGGCGTTTACGCCGCATTCGGCGATTGTGCATTGTTTCCTGATGCaa                                                                                                                          >  2:610802/1‑149 (MQ=25)                               aTGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGAACTGATGCCTGATGCAAATc                                                                                                                       >  2:121391/1‑149 (MQ=255)                                tGTTTTTAGGCGGATGAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATcc                                                                                                                      <  2:779133/149‑1 (MQ=255)                                   ttttAGGCGTATAAGGCATTTGTTCGCAGATGCCTGATGCGACTCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctgc                                                                                                                   <  1:361802/149‑1 (MQ=255)                                   ttttAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCCGGCCAGGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctgc                                                                                                                   <  1:882824/149‑1 (MQ=38)                                        ggCGGATAAGGCATTTGTGCGCAGAAGCAAGCTAAGCCGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATAGTGCACTGATGCCTGATGCAAAACATGATGaaa                                                                                                              >  2:191584/1‑149 (MQ=25)                                        ggCGGATAAGGCAGTTGTGCGGAGATGCCTTATGCGACGCTTGCACGTTTTATCATGCCTACAATCAGTGCGGGTGTGGTAGGCTGGATAAGGCGGTCACGCCGCATTTGGCGATCGTGCAATGATGTTTGATGCAAATCCTGCTGaaa                                                                                                              <  2:275672/149‑1 (MQ=255)                                         gCGGATCAGGCATTGGTGCGAAGATGCCTGATGCGGCGTTTGCGCGTGTTATCATGCCTACAATCAGTGCGGGTTTGTTAGGCTGGATAAGGCGTTCACGCCGGATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAg                                                                                                             <  2:197284/149‑1 (MQ=255)                                         gCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAg                                                                                                             <  2:600608/149‑1 (MQ=255)                                           ggATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGCTCGTGCGCTGATGCCTGATGCAAATCCTGCTGAAAGca                                                                                                           >  1:696761/1‑149 (MQ=255)                                            gATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTACTGCAAATCCTGCTGAAAGccc                                                                                                          >  2:239079/1‑147 (MQ=255)                                              tAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcacac                                                                                                        >  1:541622/1‑149 (MQ=255)                                              tAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcacac                                                                                                        >  1:797390/1‑149 (MQ=255)                                               aaGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcacaca                                                                                                       <  1:806802/149‑1 (MQ=255)                                               aaGGCATTTGTGCGCAGATGCCTGATGCAACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCTCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcacaca                                                                                                       >  2:225525/1‑149 (MQ=255)                                                  gCATTTGTGCGCAGGTGCCTGATGGGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCt                                                                                                    >  1:778952/1‑149 (MQ=255)                                                     tttGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTGGGTAGGCGGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTTCTGAAATCACACAGCtttg                                                                                                 >  2:497355/1‑148 (MQ=255)                                                          gcgcAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGACTACTATCAGTGCGGGTTTTGTAGGCTGGATAAGGCGTTAACGCCGCATCCGGCGATCGTGCACTCATGCCTGATGCAAATCCCGCTGAAAGCACACAGCTTTTTtcat                                                                                            <  1:681834/149‑1 (MQ=38)                                                                aTGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGt                                                                                      >  1:560429/1‑149 (MQ=255)                                                                    cTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCCTCCGGCGATCGTGCACTGATGCCTGCTGCAAATCCTGCTGAAAGCACTCAGCTTTTTTCATCACTGtcatc                                                                                  >  1:137306/1‑149 (MQ=255)                                                                     tGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATCCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGtcatcc                                                                                 >  2:232923/1‑148 (MQ=255)                                                                      gATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATACTTCTGAAAACACACAACTTTTTTCATCACTGTCATCAc                                                                                >  1:468985/1‑149 (MQ=255)                                                                          cGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTg                                                                            >  2:855829/1‑149 (MQ=255)                                                                              gCTTGCGCGTCTTATCATGCTTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCAt                                                                        <  1:309241/149‑1 (MQ=255)                                                                              gCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCAt                                                                        >  1:178305/1‑149 (MQ=255)                                                                                     cgTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGCTAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCa                                                                 <  1:9579/149‑1 (MQ=255)                                                                                      gTCTTAACATGTCTACAAGCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAg                                                                <  2:606739/149‑1 (MQ=255)                                                                                       tCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGt                                                               >  1:358860/1‑149 (MQ=255)                                                                                        cTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTa                                                              <  2:541622/149‑1 (MQ=255)                                                                                         ttATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCCTCTCTGTCATCCCTCTGTCATCTTTCCAATAg                                                             >  2:331125/1‑149 (MQ=255)                                                                                            tCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCAATCTGTCATCTTTCTAGTAGaaa                                                          >  1:577293/1‑149 (MQ=255)                                                                                                 ccTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAAt                                                     <  1:35488/149‑1 (MQ=255)                                                                                                  cTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGAACACAGCTTTTTTCATCACTGTCATCACACTGTCATCTTTCCAGTAGAAACTAATg                                                    >  2:893016/1‑149 (MQ=255)                                                                                                     cAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCa                                                 <  1:512474/149‑1 (MQ=255)                                                                                                      aaTCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCCATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAACCACACAGCTTTTTTCATCACTGTCATCACCCTGCCCTCTTTCCCGTAGACACACATGTccc                                                >  2:37267/1‑147 (MQ=37)                                                                                                                 gTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCCAATCCTACTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATTTCCCTCAAAtgttgt                                     >  2:340631/1‑149 (MQ=38)                                                                                                                  tttGGTAGGCTGGATAAGGCGTTCACGGCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACCAATGTCACTGAAATGGTGtt                                    <  1:794521/149‑1 (MQ=255)                                                                                                                     cgTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGCTCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGCCATCTTGCCCGTAGAAACCAATGTCACTGAAATGGTGTTTta                                 <  1:711251/148‑1 (MQ=38)                                                                                                                       tAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGTTTtata                               <  1:823091/149‑1 (MQ=255)                                                                                                                          gCTGGATAAGGCGTTCACGCCGCATCCagccgacatgtggcagcggttgtaggtctgataagacgcgcaagcgtcgcatcagacgttgattgccggatgcggggtcaacgccgcatcctgctacaaatcgtgcactgtatcacacttac                            >  2:428184‑M1/1‑27 (MQ=255)                                                                                                                          gCTGGATAAGGCGTTCACGCCGCATCCagccgacatgtggcagcggttgtaggtctgataagac                                                                                                                 >  1:216013‑M1/1‑27 (MQ=255)                                                                                                                          gCTGGATAAGGCGTTCACGCCGCATCCagccgacatgtggcagcggttgtaggtctgataagac                                                                                                                 <  2:216013‑M1/64‑38 (MQ=255)                                                                                                                           cTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCCGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAGAGTGACTGAAATGGTGTTTTATAGTTa                           >  1:760107/1‑149 (MQ=255)                                                                                                                              gATAAGGCGTTCACGCCGCATCCagccgacatgtggcagcggttgtaggtctgataagacgcgcaagcgtcgcatcagacgttgattgccggatgcggggtcaacgccgcatcctgctacaaatcgtgcactatatcaaacttacttaa                        >  2:266730‑M1/1‑23 (MQ=255)                                                                                                                               aTAAGGCGTGCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGTTTTATAGTTAAata                       <  2:552546/149‑1 (MQ=255)                                                                                                                                    gCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAAGTAATGTTACTGAAATGGTGTTTTATAGTTAAATATaatt                  >  2:10040/1‑147 (MQ=255)                                                                                                                                    gCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTACCAGTAGAAACTAATGTCACTGAAATGGTGTTTTATAGTTAAATATAAGt                  >  1:284465/1‑149 (MQ=255)                                                                                                                                       ttCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGTTTTATAGTTAAATATAAGTaaa               >  2:307997/1‑149 (MQ=255)                                                                                                                                       ttCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGTTTTATAGTTAAATATAAGTaaa               >  1:596096/1‑149 (MQ=255)                                                                                                                                       ttCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTAATCTTTCCAGTAGAAACTAATGTCACTGAAATGGAGTTTTATAGTTAAATATAAGTaaa               >  1:495898/1‑149 (MQ=255)                                                                                                                                             ccgcATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGCAATAGTGTTTTATAATTAAATATAAGTAAatatatg         >  2:43999/1‑148 (MQ=255)                                                                                                                                                    cagccgacatgtggcagcggttgtaggtctgataagacgcgcaagcgtcgcataagacgttgattgccggatgcggggtcaacgccgcatcctgccacaaatcgtgcactatatcaaacttacttaatcaccccattgcgccgcagttg  >  2:233835‑M1/1‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     TTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGCAGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAA  >  NC_000913_3_bme_pgi/1084617‑1084912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.