New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 1084764	NA (NA)	4 (0.090)	3/264	NT	NA	noncoding (83/86 nt)	REP95 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP95 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913_3_bme_pgi	3098440 =	NA (NA)					noncoding (28/121 nt)	REP217 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP217 (repetitive extragenic palindromic) element; contains 3 REP sequences

AGGCGATTGCCCAGGGTTATCTCACCGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGT  >  NC_000913_3_bme_pgi/3098297‑3098588                                                                                                                                                |                                                                                                                                                     aGGCGATTTCCCAGGGTTATCACAGCGAATGTGAGGATTACTGGTAGAAAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGACGGAGCTTTTTTTGGCTGAGTAATCTTGTATTGCCGGATGCGGCGTGAACGCTTTATCCAGCCGa                                                                                                                                                 <  2:80113/149‑1 (MQ=255)           ccAGGGTTATCTCACCGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCGTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGcgt                                                                                                                                       <  2:878159/149‑3 (MQ=255)                   aTCTCACCGAATCTGCGGATTACTGGCAGATACCGTAACATGGGTAGCTGTTTTTATATTCGCTGCTGGAGCTTTTTCTGGTGGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTa                                                                                                                               <  1:408832/149‑1 (MQ=38)                    tctcACCGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAg                                                                                                                              <  1:599086/149‑1 (MQ=255)                    tcacACCGAATGTGCAGATTACAGACAAATAACGGAACACGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAg                                                                                                                              <  1:85816/146‑1 (MQ=39)                       cACCGAATGTGCTGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTc                                                                                                                           <  1:157643/149‑1 (MQ=255)                        tccGAATGTGCGGATTACTTGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCGGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCt                                                                                                                          <  1:159546/148‑1 (MQ=255)                        aCCGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCt                                                                                                                          <  1:534285/149‑1 (MQ=255)                        aCCGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAACAGACACGTTGCTGCGGTTGTAGGTCt                                                                                                                          >  1:240353/1‑149 (MQ=255)                         ccGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGGGTAAACTTGTATGGCAGGATGCGGCGTGAACGCCTTATCCCGCCGACATGTGGCAGCGGTTGTTGGTCtt                                                                                                                         >  1:429751/1‑148 (MQ=255)                          cGAATGTGCGGATTACTGGCAGATAACGGCACGTGGGAAGCTGTTTTTGAATTGGCTGCTGGAGCTTTTTCTGGATGAGTAGACTTGTATTGCTGGATGCGGAGTGCACGCCTTATCCTGCTGCAATTTGGATGCGGTTGTAGGttttt                                                                                                                        >  2:254630/1‑145 (MQ=255)                           gAATGTCGGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTCAGGAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGAt                                                                                                                       <  2:237252/149‑1 (MQ=255)                            aaTGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATa                                                                                                                      <  1:579757/149‑1 (MQ=255)                             aTGGGCGGATTACTGGCAGATTACGGAACATGGGAAGCTGTTTTTAAATTCGCTGGTAGCAGTTCGGTGGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATaa                                                                                                                     <  1:430950/149‑1 (MQ=37)                               gtgCTGAGTACTTGCAGATATCGGAACGTGGGAAGTTGTTTTTAAATTTGCTGTTGGAGTTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGa                                                                                                                   <  1:58466/149‑1 (MQ=37)                                          tGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGt                                                                                                        <  1:444559/149‑1 (MQ=255)                                          tGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACACCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCACGCGt                                                                                                        >  1:284945/1‑149 (MQ=255)                                            gCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCg                                                                                                      >  1:471354/1‑149 (MQ=255)                                                 tAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCa                                                                                                 >  2:767381/1‑149 (MQ=255)                                                   aCGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGa                                                                                               >  1:43689/1‑149 (MQ=255)                                                      gAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGAAGCGGTGGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGt                                                                                            <  1:889800/149‑1 (MQ=255)                                                         caagcgAATCTGTTTTTAACTTCGCTACTAGAGCCTTTTCTAGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGa                                                                                         <  1:96705/144‑1 (MQ=25)                                                         cATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGa                                                                                         <  1:767381/149‑1 (MQ=255)                                                          ggcgcatgCTGTTTTTAGATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGGCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGAt                                                                                        <  2:443815/142‑1 (MQ=255)                                                                   tGTTTTTACATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGACTTATGCAGCCGACATGTTGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTTCCGGATg                                                                               >  1:257536/1‑149 (MQ=37)                                                                     tttttAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCTGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCg                                                                             >  2:145677/1‑149 (MQ=255)                                                                      ttttAAATTCGGTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCgg                                                                            <  1:669664/149‑1 (MQ=255)                                                                      ttttAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCgg                                                                            <  1:517857/149‑1 (MQ=255)                                                                      gtttAAAGTCGCTGCTGGGGTTGTTTCTGGCGGAGTAAACTTGTATTGCCGGACGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCgg                                                                            <  1:61267/148‑1 (MQ=25)                                                                        ttAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCCGCGGTTGTAGGTCTGATAAGACACGCAAACGTAGCATCAGACCTTAATTGCCGGATGCcggg                                                                          >  1:178006/1‑149 (MQ=37)                                                                            aTTCGCTGCTGTAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCaa                                                                      <  1:404794/149‑1 (MQ=255)                                                                            aTTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCaa                                                                      >  1:161340/1‑149 (MQ=255)                                                                             ttCGCTGCTGGAGCTTTTTCTTGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAAc                                                                     <  1:374004/149‑1 (MQ=255)                                                                             gtCGCTTCTTGAGCTTTTTCTGGGTGAGTAAACTTGTTTTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAAc                                                                     <  1:40518/148‑1 (MQ=255)                                                                                  tgctgGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATACAGCCAACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTTCCGGATGCGGGGTCAAcgccag                                                                >  1:886498/1‑147 (MQ=255)                                                                                    ctgGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTc                                                                                                       <  2:739683/108‑1 (MQ=255)                                                                                    ctgGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTc                                                                                                       >  1:739683/1‑108 (MQ=255)                                                                                    ctgGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGAGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCAt                                                              >  1:577537/1‑149 (MQ=255)                                                                                     tgGAGCTTTTTCTGGCTGAGTAAACGTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAACCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCTCATc                                                             <  1:810803/149‑1 (MQ=255)                                                                                      ggAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATcc                                                            <  1:832348/149‑1 (MQ=255)                                                                                       gAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCt                                                           >  2:133675/1‑149 (MQ=255)                                                                                        aGCTTTTTCTCGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGCTAAGACGCGTATGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTg                                                          <  2:450553/149‑1 (MQ=255)                                                                                          cTTTTTTTTGCTGAGTAAATTTGTATTGCCGGATGCGGCGTGAACGCCTTTTCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCt                                                        <  1:98226/149‑1 (MQ=255)                                                                                             tttCTGGGTGAGTAAACGTGTAGTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACa                                                     <  2:755341/149‑1 (MQ=255)                                                                                                   gCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGt                                               <  1:888690/149‑1 (MQ=255)                                                                                                   gCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGt                                               <  2:161340/149‑1 (MQ=255)                                                                                                    cTGAGTAAACTTGTATTGCTGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTg                                              <  1:145677/149‑1 (MQ=255)                                                                                                    cTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTg                                              <  1:621091/149‑1 (MQ=255)                                                                                                      gAGTAAACTTGCTTTGCCGTATGTGGCGTGAACCCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCAGCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCa                                            <  1:302166/149‑1 (MQ=25)                                                                                                                gTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCaaa                                  <  2:315657/149‑1 (MQ=255)                                                                                                                gTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCaaa                                  <  2:43689/149‑1 (MQ=255)                                                                                                                    tGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAactta                              <  2:665278/149‑1 (MQ=255)                                                                                                                     gctggataaggcgttcacgccgcatccAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGAc                                                                                                                  <  2:216013‑M2/37‑1 (MQ=255)                                                                                                                     gctggataaggcgttcacgccgcatccAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGAc                                                                                                                  >  1:216013‑M2/28‑64 (MQ=255)                                                                                                                     gctggataaggcgttcacgccgcatccAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTGTATCACacttac                             >  2:428184‑M2/28‑149 (MQ=255)                                                                                                                     gCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGTCGCGCAAGCGTCGTATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAacttac                             <  2:198008/149‑1 (MQ=255)                                                                                                                      cctgATGCGGCGTGAACGTCTTATTCAGTCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAacttact                            <  1:318522/146‑1 (MQ=255)                                                                                                                      ccGGATGCGGCGTGAACGCCTTATCCAGCCTACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAacttact                            <  1:611800/149‑1 (MQ=255)                                                                                                                         gataaggcgttcacgccgcatccAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTaa                         >  2:266730‑M2/24‑149 (MQ=255)                                                                                                                              ggcgTGAACTCCTTATCCAGCCGACATGAGGCAGCGGATGTAGGTCTGATAAGAAGCGCAAGGGACGAATCAGACGTTGATTACCGGATGCGGGGTCAACGCCGCATCCCGCGACAAATCGCGCACCATAACAAAcctacatacacacg                    >  2:220731/1‑143 (MQ=255)                                                                                                                                cgTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCAcccc                  <  1:851885/149‑1 (MQ=255)                                                                                                                                    aaCGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCAACCCATTg              >  1:139122/1‑149 (MQ=255)                                                                                                                                        ccTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGAt                                                                                        <  2:124961/71‑1 (MQ=255)                                                                                                                                        ccTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGAt                                                                                        >  1:124961/1‑71 (MQ=255)                                                                                                                                        ccTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATACGGGGACAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGcgcc          >  1:511973/1‑149 (MQ=255)                                                                                                                                               cAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATAAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCCACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTg   >  2:233835‑M2/2‑149 (MQ=255)                                                                                                                                                aGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTACACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAgttgt  >  1:673644/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                     AGGCGATTGCCCAGGGTTATCTCACCGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAAACTTGTATTGCCGGATGCGGCGTGAACGCCTTATCCAGCCGACATGTGGCAGCGGTTGTAGGTCTGATAAGACGCGCAAGCGTCGCATCAGACGTTGATTGCCGGATGCGGGGTCAACGCCGCATCCTGCTACAAATCGTGCACTATATCAAACTTACTTAATCACCCCATTGCGCCGCAGTTGT  >  NC_000913_3_bme_pgi/3098297‑3098588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.