New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 3402416	54 (1.160)	3 (0.070)	3/260	NT	5.4%	coding (917/1941 nt)	csrD	targeting factor for csrBC sRNA degradation
	?	NC_000913_3_bme_pgi	= 3402431	54 (1.210)					coding (902/1941 nt)	csrD	targeting factor for csrBC sRNA degradation

CGCCAGGCGCAGATACCAATGTGGATCATATCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACATATTGAAATCCGGCAGACGAATCATCATCACG  >  NC_000913_3_bme_pgi/3402269‑3402562                                                                                                                                                    |                                                                                                                                                   cGCCAGGTGGAGATACCAATGTGGATCATATCGTCGCTATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCTTCTTTTTTCGTTCGGTGCGGTAACAGCGGAGCAAAATCACTGCg                                                                                                                                                   <  2:554580/149‑1 (MQ=255)  gCCAGGCGCAGATACCAATGTGGATCATATCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTCACGTCCGGTGCGGTAACAGCGCAGCAAAATAACTGCgg                                                                                                                                                  >  1:762762/1‑149 (MQ=255)          cAGATACCAATGTGGATCATATCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGNAGCAAAATCACTGCGGTGGTAAcg                                                                                                                                          >  1:8598/1‑149 (MQ=255)           aGATACCAATGTGGATCATATCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGCTTAACTGACCGACGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAAcgc                                                                                                                                         >  1:90472/1‑149 (MQ=255)               aCCAATGTGGATCATATCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTGTCAACGGCTTTGATTAACTGATCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGTTAACACGCca                                                                                                                                     >  1:651460/1‑149 (MQ=255)                  aaTGTGGATCATATCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACAAACCAAGCTCTGTGTCGCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAgca                                                                                                                                  <  2:546471‑M2/149‑4 (MQ=255)                   aTGTGCATCATAACGTCGCGATCGAGCATTTTTTTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTATCTGCCGCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAgcag                                                                                                                                 >  1:26692‑M2/1‑145 (MQ=255)                          tCATATCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCa                                                                                                                          >  1:359676/1‑149 (MQ=255)                            gtttggtcgCTATCGAGAATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAgg                                                                                                                        <  1:196293/144‑1 (MQ=255)                            atatCCTCGCGATCGAGCATTTTATTGTTCGGCAATGTATCAACGGCTTTGATTAACTGAGCGGCGATGCTCTCTGCCTCTACTAACGTCCGGTCCGGTAACAGCGCAGCAACATCACCGCTTTGGTAACGCGCCAGCAGTGCGCCAgg                                                                                                                        <  2:889726/149‑1 (MQ=255)                             tatCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAggg                                                                                                                       >  2:389683/1‑149 (MQ=255)                             tatCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGCAACAGCGCAGCAAAACCACTCCGCTGGTAACGCGCCACCCGTCCCCCAggg                                                                                                                       >  2:608842/1‑149 (MQ=255)                                  tcgCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGGCAGCAGTGCGCCAGGGTAgcg                                                                                                                  >  1:83865/1‑149 (MQ=255)                                   cgcgATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACT‑cgcgttactaccgcattgattttgctgcgctgttac                                                                                                                 <  2:102938‑M1/149‑37 (MQ=255)                                   cgcgATCGAGCATTTTATTGTTCGACAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAgcgc                                                                                                                 >  2:8097/1‑149 (MQ=255)                                       atcttacATTTTATGGTCCGGCAAGGTATCAACGGCTTTGATTAACTGACCGTCGATCCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGcatca                                                                                                             <  1:617024/143‑1 (MQ=255)                                           aGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATaaa                                                                                                         <  1:751065/149‑1 (MQ=255)                                           aGCATTTTATTGTTCGGCAAAGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATaaa                                                                                                         <  1:579743/149‑1 (MQ=255)                                            gCATTTTATTGTTCGGCAAGGGATCAACGGCTTGGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAAt                                                                                                        <  2:466481/149‑1 (MQ=255)                                              aTTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGt                                                                                                      <  1:499471/149‑1 (MQ=255)                                                 ttctttttCGGCAATGTATCAACGGCTTTGCTTAACTGACCCGCTATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGa                                                                                                   <  1:388058/143‑1 (MQ=255)                                                 ttATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGa                                                                                                   <  2:553847/149‑1 (MQ=255)                                                 ttACTGTTCGGCAAGTTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGTCTTTTTTAACGTCCGGTGCTGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGa                                                                                                   <  1:308199/149‑1 (MQ=255)                                                      gTTCGGCACGGTATCAACGTCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGAcagca                                                                                              <  1:319975/149‑1 (MQ=255)                                                      gTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATTTCTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGAcagca                                                                                              <  1:700743/149‑1 (MQ=255)                                                      gTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGAcagca                                                                                              <  1:389683/149‑1 (MQ=255)                                                        tCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGa                                                                                            <  1:727801/149‑1 (MQ=255)                                                        tCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGAGCATCATAAATGTCGACAGCAGa                                                                                            >  1:88331/1‑149 (MQ=255)                                                           gCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGCCAGCAGATTc                                                                                         >  1:536597/1‑149 (MQ=255)                                                            cAAGGTATCAACGGCTTTGATTAACTCACCGGCGATGCTCTCTGCCTCTTTTAACTTCCGGTGCGGTAACAGCGCACCAAAATCACTGCGGAGGTAACGCCCCAGCAGTACGCCAGGGAAGCCCATCATAAATGTACACCGCAGAATCg                                                                                        >  2:734258/1‑149 (MQ=255)                                                               ggTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCa                                                                                     <  1:892852/149‑1 (MQ=255)                                                                 taacAACGGCTATGATTAACAGACCGGCGATGCTCTCGGCCCCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTTGTAACCCTCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCaga                                                                                   <  2:497159/146‑1 (MQ=255)                                                                 tATCAACGTCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCaga                                                                                   <  1:3997/149‑1 (MQ=255)                                                                 tATCAACGGCTTTGATTAACTGACTGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCaga                                                                                   <  1:266155/149‑1 (MQ=255)                                                                 tATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTTTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCaga                                                                                   <  1:739814/149‑1 (MQ=255)                                                                   tCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAACGTCGACAGCAGATTCGTCAGAGt                                                                                 >  2:479164/1‑149 (MQ=255)                                                                   tCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGATAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCaaagg                                                                                 >  1:498680/1‑148 (MQ=255)                                                                   tCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCAGTAACAGCGCAGCAAAATCACTGCGGGGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGAATCGTCAGAGt                                                                                 >  2:817673/1‑149 (MQ=255)                                                                     aaCGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTga                                                                               >  2:198958/1‑149 (MQ=255)                                                                     aaCGGCTTTGATTAACTGACCGGCGATGCTCTCTGACTCTTTTAACGTCCCGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGTTAACGCGCCAGCAGAGCGCCAAGGTAACGCCTCATAGACGTCGACAGCAGCTTCGTCaccgggc                                                                               >  2:588145/1‑143 (MQ=255)                                                                      aCGTCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTgaa                                                                              <  2:381206/149‑1 (MQ=255)                                                                              gATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGtt                                                                      >  1:897256/1‑149 (MQ=255)                                                                                ttgaCTGACCGGCGATGCTCGCTGCCTCATTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCTGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATCCGTCAGAGTGAAGAACTGttct                                                                    <  2:354230/146‑1 (MQ=255)                                                                                 tAACTGACGGGCGATGCTCTCTGCCTCGTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGttctt                                                                   <  2:70405/149‑1 (MQ=255)                                                                                     tGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCtggcgcgttaccaccgcagtgattttgc                                                                                                                        <  1:606417‑M1/92‑29 (MQ=255)                                                                                     tGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCtggcgcgttaccaccgcagtgattttgc                                                                                                                        >  2:606417‑M1/1‑64 (MQ=255)                                                                                          ggCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCGGCAGTGCGCCCGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGc                                                          >  2:273499/1‑149 (MQ=255)                                                                                                 ctctctGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCggt                                                                                                                                                 <  1:359601/55‑1 (MQ=255)                                                                                                 ctctctGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCggt                                                                                                                                                 >  2:359601/1‑55 (MQ=255)                                                                                                  tctctGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGGGAAAAAGCGCCAAGAGTGCGCCAGGGTAGCGCATCCTAAAAGTCGAAAGCAGATTCGTCAGCGTGAAAAACTCTTATTCAAACTGGCTGTGcccc                                                  >  2:115200/1‑149 (MQ=255)                                                                                                     ccgCCTCTTTTAACGTCCGGTGCGGTAACCGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAg                                               <  1:346240/147‑1 (MQ=255)                                                                                                             tttATCGTTCGGTGCGGTAACAGCGAAGGAAAATCACTGCGGTGGTAACGGGCCAGCAGGGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGAGTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCt                                       <  2:13063/149‑1 (MQ=255)                                                                                                             tttAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCTCCAGTAGGTCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCt                                       >  1:576601/1‑149 (MQ=255)                                                                                                             tttAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCt                                       >  1:576611/1‑149 (MQ=255)                                                                                                                     cccgTGCGCTAACAGCGCAGCAAAATCACTGCGGTTGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACatat                               <  2:73293/146‑1 (MQ=255)                                                                                                                     ccGGTGCGGTAACACCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACatat                               <  2:332544/149‑1 (MQ=255)                                                                                                                      cGGTGCGGTAATAGCGCAGCAAAATCTCTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACATAtt                              <  2:362275/149‑1 (MQ=255)                                                                                                                      cGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACATAtt                              <  1:490393/149‑1 (MQ=255)                                                                                                                             gTAACAGCGCAGCAAAATCAATGCGGTAGTAACGCGC‑gtgattttgctgcgctgttaccgcaccggacgttaaaagaggcagagagcatcgccggtcagttaatcaaagccgttgataccttgccgaacaataaaatgctcgatcgcg                       <  2:102938‑M2/149‑112 (MQ=255)                                                                                                                                  aGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGCCAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACATATTGAAATCCGGCAg                  >  1:690621/1‑149 (MQ=255)                                                                                                                                     gcagcaAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACATATTGAAATCCGGCAGACg               >  1:112571/1‑149 (MQ=255)                                                                                                                                        gcaAAATCACTGCGGTGGTAACGCGCCAgcagtgattttgctgcgctgttaccgcaccggacgttaaaagaggcagagagcatcgccggtca                                                                     <  1:606417‑M2/92‑65 (MQ=255)                                                                                                                                        gcaAAATCACTGCGGTGGTAACGCGCCAgcagtgattttgctgcgctgttaccgcaccggacgttaaaagaggcagagagcatcgccggtca                                                                     >  2:606417‑M2/1‑28 (MQ=255)                                                                                                                                        acaAAAACACTGCGGTGGTAACGCGCCAACAGAGCGCCAGGGGAGCACATCATAAATGTCGACAGCAGATTCGTCAGATTGAAGAACTGTTCTACAACCTAGCTGTCCCCCCAAGTATCGCTCAACATATTGAAAACCCGCAGACGAat            <  2:83865/148‑1 (MQ=255)                                                                                                                                         aaaaaGCACTGCGGTGGTAACGCGCCAGCAGTGCGCCACGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGATGTGCACAAAGGTATCGATCACCATATTGAAATCCGGCAGACGAatc           <  2:212511/148‑1 (MQ=255)                                                                                                                                           aaaTCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACATATTGAAATCCGGCAGACGAatcat         >  1:470612/1‑149 (MQ=255)                                                                                                                                                 ctgctggcgcgttaccaccgcagtgattttgctgcgctgttaccgcaccggacgttaaaagcggcagatagcatcgccggtcagttaatcaaagccgttgataccttgccgaacaaaaaaatgctcgatcgcgacgttatgatgcacat   >  1:26692‑M1/1‑4 (MQ=255)                                                                                                                                                  tgctggcgcgttaccaccgcagtgattttgctgcgctgttaccgcaccggacgttaaaagcgacacagagcttggtttgtcagttaatcaaagccgttgataccttgccgaacaataaaatgctcgatcgcgacgatatgatccacatt  <  2:546471‑M1/149‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CGCCAGGCGCAGATACCAATGTGGATCATATCGTCGCGATCGAGCATTTTATTGTTCGGCAAGGTATCAACGGCTTTGATTAACTGACCGGCGATGCTCTCTGCCTCTTTTAACGTCCGGTGCGGTAACAGCGCAGCAAAATCACTGCGGTGGTAACGCGCCAGCAGTGCGCCAGGGTAGCGCATCATAAATGTCGACAGCAGATTCGTCAGAGTGAAGAACTGTTCTTCAACCTGGCTGTGCCCCCAGGTATCGCTCAACATATTGAAATCCGGCAGACGAATCATCATCACG  >  NC_000913_3_bme_pgi/3402269‑3402562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.