New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 4245134 =NA (NA)11 (0.260) 9/272 3.6 2.8% noncoding (42/126 nt) REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913_3_bme_pgi 4245166 = 387 (9.140)noncoding (74/126 nt) REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 402 total aligned reads displayed.

CAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGAC  >  NC_000913_3_bme_pgi/4244986‑4245282
                                                                                                                                                    |                                                                                                                                                       
 aaGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGGTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGc                                                                                                                                                        <  2:657788/149‑1 (MQ=255)
 aaGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGc                                                                                                                                                        >  1:573740/1‑149 (MQ=255)
   ggTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACCGCCt                                                                                                                                                      >  2:149393/1‑149 (MQ=255)
    gTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGCCAACAACCGCCTg                                                                                                                                                     >  2:276141/1‑149 (MQ=255)
         ccaccaGCAGGCCGAGCAGACGTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCg                                                                                                                                                >  2:678688/1‑149 (MQ=255)
         ccaccaGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGCCATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGGCTTATCCGCCAACAACTGCCTGATGCg                                                                                                                                                >  2:294842/1‑149 (MQ=255)
           accaGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑Ac                                                                                                                                             <  1:304933/149‑1 (MQ=255)
           accaGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑Ac                                                                                                                                             <  1:272640/149‑1 (MQ=255)
           accaGCAGGCCGAGCAGACCTAGCACCGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGACAAGACCCCTTATCCGACAACAACTGCCTGATGCG‑Ac                                                                                                                                             <  1:185357/149‑1 (MQ=255)
             cagcagGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑Gc                                                                                                                                          >  2:418388/1‑149 (MQ=255)
              agcagGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCt                                                                                                                                         >  1:79179/1‑149 (MQ=255)
                ccggCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑Ga                                                                                                                                      <  1:432126/147‑1 (MQ=255)
                cagGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑Ga                                                                                                                                      <  2:763673/149‑1 (MQ=255)
                   gCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GAcgc                                                                                                                                   >  2:288494/1‑149 (MQ=255)
                   gCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAAGGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCCGGACGGATAAGGCTTTCACGCCTTATCCAACAACAACTGCCTGATGCC‑AC‑TCG‑GAcgc                                                                                                                                   >  2:322849/1‑149 (MQ=255)
                     cgcgcgcaCCTAGCACTGTCCATTTCCGCGCGTCGCTTTGCCCCCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGt                                                                                                                                 <  2:754930/142‑1 (MQ=39)
                         cAGACATAGCACTGACCAGTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTa                                                                                                                             <  2:575963/149‑1 (MQ=255)
                           gACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATc                                                                                                                           >  1:202435/1‑149 (MQ=255)
                            aCCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCa                                                                                                                          >  2:52825/1‑149 (MQ=255)
                            aCCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTCCCTGATGCG‑CC‑GCT‑GACGCGTCTTATCa                                                                                                                          >  1:745773/1‑149 (MQ=255)
                            aCCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGAAGGATAAGTCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCa                                                                                                                          <  1:149393/149‑1 (MQ=255)
                             ccTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAg                                                                                                                         <  2:85789/149‑1 (MQ=255)
                             ccTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTGTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAg                                                                                                                         <  2:411671/149‑1 (MQ=255)
                               tAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGc                                                                                                                       >  2:465345/1‑149 (MQ=255)
                               tAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGc                                                                                                                       <  1:90881/149‑1 (MQ=255)
                                aGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGcc                                                                                                                      <  1:536465/149‑1 (MQ=255)
                                 gCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCt                                                                                                                     >  1:395797/1‑149 (MQ=255)
                                    cTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCCGGCCTACa                                                                                                                  >  2:187710/1‑149 (MQ=255)
                                    cTGACCATGTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATGCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACa                                                                                                                  <  1:663339/149‑1 (MQ=255)
                                     tGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACAt                                                                                                                 >  2:239596/1‑149 (MQ=255)
                                       aCCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGTCGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGCTGCG‑AC‑GCT‑GACGCGTCTTATCAGTCCTCCATAc                                                                                                               >  2:598206/1‑149 (MQ=255)
                                       aCCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATAc                                                                                                               >  1:588352/1‑149 (MQ=255)
                                         cATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGt                                                                                                             <  1:251848/149‑1 (MQ=255)
                                            ttCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACT‑‑ATAATCCG‑GCAGTTGGACGCGTCTTATCAGGCCTACATACGTTTc                                                                                                          <  1:377425/149‑1 (MQ=255)
                                             tCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACAGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCg                                                                                                         <  2:26773/149‑1 (MQ=255)
                                             tCAGCGCGTCGCTTTGCAACCAAGTGTGGTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTCTCAGGCCTACATACGTTTCg                                                                                                         <  1:524973/149‑1 (MQ=38)
                                               aGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGt                                                                                                       >  2:693608/1‑149 (MQ=255)
                                               aGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGt                                                                                                       >  1:604509/1‑149 (MQ=255)
                                                       gCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCTTTCTCCTACAACAACTGCGTG‑TCCGCGC‑TCC‑GACGCGCCTTCTCTGGCCCACATACGTTTCGGTTTTGTAgg                                                                                               >  1:561942/1‑149 (MQ=255)
                                                       gCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAgg                                                                                               >  1:282228/1‑149 (MQ=255)
                                                        cTTTGCCCCAAATGTTTCTTTTTACTGACATCCATGGGGTTCTTCCACATTCCAGGCCGGATAAGGGTTTCACGCCTTATCCGACAACAACTGCCTGATGCC‑AC‑GCT‑GACGCGACATCAAAGACAGTCATAACTTTCGGTTTTGTAGGc                                                                                              >  2:159789/1‑149 (MQ=255)
                                                        cTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGc                                                                                              <  1:693142/149‑1 (MQ=255)
                                                          ttGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCATCGTTGTCTGCTACGCAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCg                                                                                            <  2:740395/149‑1 (MQ=37)
                                                               accaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTCTCGGTTTTGTAGGCCGGACaa                                                                                       >  1:608284/1‑149 (MQ=255)
                                                                ccaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAg                                                                                      <  1:319628/149‑1 (MQ=255)
                                                                     gTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCCGGCGCTGATACGGTTCGGTTTTGTAGGCCGGACAAGGCGtt                                                                                 <  1:762622/149‑1 (MQ=39)
                                                                      tttCTTTTTAATGACATCCATGGGGTTTTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTc                                                                                <  2:627489/149‑1 (MQ=255)
                                                                      tctCTTTTTCAGGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATTCGACAACAACTGCCGGATTCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTc                                                                                <  2:427062/147‑1 (MQ=38)
                                                                       ttCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACaa                                                                                       >  1:65418/1‑141 (MQ=255)
                                                                           ttttAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑CC‑GCG‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAcgcc                                                                           <  1:728807/149‑1 (MQ=255)
                                                                                  gACATCTATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCg                                                                    <  2:540839/149‑1 (MQ=255)
                                                                                  gACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGTTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCg                                                                    <  2:551629/149‑1 (MQ=255)
                                                                                      tCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAt                                                                >  1:313582/1‑149 (MQ=255)
                                                                                       ccATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAtt                                                               >  1:363308/1‑149 (MQ=255)
                                                                                        cATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAt                                                                <  2:121477/147‑1 (MQ=255)
                                                                                          tGGGGTTCTTCCTCATTCCAGGACGGATAAGGTTTTCACGCCTTCTCCGACAACAACTGCCTGATGCG‑AC‑GCT‑CACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTca                                                            <  2:25/149‑1 (MQ=255)
                                                                                          tGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCA‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCCGATCCAGCATTTca                                                            >  1:321822/1‑149 (MQ=255)
                                                                                                  ttcCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTa                                                    >  2:703665/1‑149 (MQ=255)
                                                                                                     cgcATTCCAGGGCGGATAAGGCTTTCAGGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGACCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGAATTTCACAGCATTACtt                                                 >  2:721375/3‑149 (MQ=255)
                                                                                                     cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACGACAACTGCCTGATGCG‑AC‑GCT‑GAGGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGGATGCGGCATTTGACAGCATTGCtt                                                 >  1:67822/1‑149 (MQ=255)
                                                                                                     cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTATTGTAGGCCGTCCACGGCGTTCACGCCGCATCCGGCATTTCATAGCATTACtt                                                 >  1:56973/1‑149 (MQ=38)
                                                                                                      tCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTcaca                                                          >  2:314973/1‑139 (MQ=255)
                                                                                                       cATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTgg                                               <  1:542859/149‑1 (MQ=255)
                                                                                                       cATTCCAGGACGGAGAAGGTTTTCACCCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCAGCATCCGGCATTTCACAGCATTACTTgg                                               <  2:474983/149‑1 (MQ=255)
                                                                                                         ttCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAc                                                                              <  2:519085/116‑1 (MQ=255)
                                                                                                          tCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATTCT‑CC‑GCC‑GACGCGTCTTATCAGGCCTACATACGTCTCGGTTTTGTAGGCCGCACAAGGCGTTCCCGCCGCATCCGGCATTTCACAGCATTACTTGGTGa                                            >  1:343523/1‑149 (MQ=38)
                                                                                                            cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATa                                          <  2:488585/149‑1 (MQ=255)
                                                                                                             aGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATAc                                         <  1:220032/149‑1 (MQ=255)
                                                                                                               gACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAg                                                                                      >  1:751977/1‑102 (MQ=255)
                                                                                                                tcGGATAAGGCGTGAAAGCCTTATCCGTCAACACCTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATAc                                         <  2:340945/145‑1 (MQ=38)
                                                                                                                aCGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAg                                      >  1:477572/1‑149 (MQ=255)
                                                                                                                     tAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTgc                                 <  2:746922/149‑1 (MQ=255)
                                                                                                                      aaGGCTTTCACGCCTTATCCGACAACAACTGCCTGATTCG‑AC‑GCT‑GACGCGTCTTATCAGACCTACATACGCTGCAGTTTTGCAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCGTTCCTTGGTGTTACGACTCTgcg                                >  2:453869/1‑149 (MQ=37)
                                                                                                                      aaGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTgcg                                >  1:726233/1‑149 (MQ=255)
                                                                                                                        ggCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATcc                                                                     <  1:516965/110‑1 (MQ=255)
                                                                                                                        ggCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCCCAGCATTACTTGGTGATACGa                                       >  1:470039/1‑140 (MQ=255)
                                                                                                                        ggCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGGCTGcgcg                              >  1:215209/1‑149 (MQ=255)
                                                                                                                         gCTTGCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCCGCGCGt                             <  2:197848/149‑1 (MQ=255)
                                                                                                                           tttCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCg                                                                                                         <  1:130116/71‑1 (MQ=255)
                                                                                                                              cACCCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGTGTCTTATCAGGTCTACATACGTTTCGTTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCTGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTc                        <  2:605836/149‑1 (MQ=255)
                                                                                                                               aCGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCa                       >  1:460660/1‑149 (MQ=255)
                                                                                                                               aCGCCTTATCCGACAACAACGGCCTGAGGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCa                       <  1:333012/149‑1 (MQ=255)
                                                                                                                                cGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAg                      >  1:739210/1‑149 (MQ=255)
                                                                                                                                cGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAg                      <  1:164549/149‑1 (MQ=255)
                                                                                                                                 gCCTTATCCGACAACAACTGCCTGCAGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTCGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAATCTTCGCGTCTTTCCgg                     >  2:666304/1‑149 (MQ=38)
                                                                                                                                 gCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAgg                     >  2:135445/1‑149 (MQ=255)
                                                                                                                                   cTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGc                   >  1:414461/1‑149 (MQ=255)
                                                                                                                                   cTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCAGGACAAGGTGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTACGGGc                   >  1:630043/1‑149 (MQ=255)
                                                                                                                                    ttATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCt                  <  2:375164/149‑1 (MQ=255)
                                                                                                                                     tATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACATGGTGATACGAAACTCCGCGCCTTTCAgcgccc                 >  2:445596/1‑147 (MQ=37)
                                                                                                                                      aTCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTc                >  1:292057/1‑149 (MQ=255)
                                                                                                                                        ccGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCAt              <  2:564536/149‑1 (MQ=255)
                                                                                                                                         cGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATc             <  1:703665/149‑1 (MQ=255)
                                                                                                                                         cGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATc             <  1:108380/149‑1 (MQ=255)
                                                                                                                                           acaacaACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGa           >  1:641560/1‑149 (MQ=255)
                                                                                                                                            caacaaCTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGAc          <  2:216237/149‑1 (MQ=255)
                                                                                                                                             aacaacTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATCAGAGTCTGCGCGCATCTCAGGGCTTCAGCGACa         <  2:648762/149‑1 (MQ=38)
                                                                                                                                             aacaacTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACa         >  1:235497/1‑149 (MQ=255)
                                                                                                                                                 acTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCt     <  2:556755/149‑1 (MQ=255)
                                                                                                                                                 acTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCt     >  1:554833/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                       
CAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCG‑AC‑GCT‑GACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGAC  >  NC_000913_3_bme_pgi/4244986‑4245282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.