New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 3150670	45 (0.630)	5 (0.070)	5/270	10.5	10.0%	noncoding (117/255 nt)	RIP222 (repetitive extragenic palindromic) element; contains 5 REP sequences and 2 IHF sites	RIP222 (repetitive extragenic palindromic) element; contains 5 REP sequences and 2 IHF sites
	?	NC_000913_3_bme_pgi	= 3150808	NA (NA)					noncoding (255/255 nt)	RIP222 (repetitive extragenic palindromic) element; contains 5 REP sequences and 2 IHF sites	RIP222 (repetitive extragenic palindromic) element; contains 5 REP sequences and 2 IHF sites
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTGTCCGCTCGGAAGAAGATGGTGGTGTCTTTCT  >  NC_000913_3_bme_pgi/3150669‑3150954                                                                                                                                            |                                                                                                                                                   aGGCCTGATAAGCGTAGCGTATCAGGCATTGAGCACCTTATGCCTGTTGCGTTGTGTCCGCCTTATCCGGCCTACAAACGCACGAAGATGCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCtact                                                                                                                                           <  1:511972/149‑1 (MQ=25)   gCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCtacttt                                                                                                                                         >  1:1228689/1‑149 (MQ=255)   gCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCtacttt                                                                                                                                         >  1:58655/1‑149 (MQ=255)    ccTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGAAATTCtacttta                                                                                                                                        >  1:172386/1‑149 (MQ=255)            gCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGCAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCCATTCTACTTTACTTCGCtt                                                                                                                                >  2:340580/1‑149 (MQ=255)            gCGTAGCGCATCAGGCATACAGTGCCGATGTCCGTATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCtt                                                                                                                                <  1:574216/149‑1 (MQ=21)                agccgttCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGc                                                                                                                            <  1:117431/143‑1 (MQ=255)                aGCGCAACAGGCATTGCGCACCTAAGGCCGGATGGGTCGTTAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGc                                                                                                                            <  2:1233539/149‑1 (MQ=25)                aGCCCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGc                                                                                                                            <  1:304074/149‑1 (MQ=255)                   gcATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGt                                                                                                                         <  1:287010/149‑1 (MQ=255)                   gcATCAGGCATTGAGCACCTAATGCCGGAGGCGTCGTGACCGCATTATCAGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGt                                                                                                                         <  1:1099229/149‑1 (MQ=255)                     aTCAGGCATTGATCACCGAATGCCGGATGCGTCGGGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACAGGTTGCAATAGATTTTGTAGGCCTGATGAGCGTCGCTCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGttt                                                                                                                       <  2:284700/149‑1 (MQ=25)                        aGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTttctt                                                                                                                    >  2:440933/1‑149 (MQ=255)                        aGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGAGGTttctt                                                                                                                    >  1:1129848/1‑149 (MQ=255)                         ggCATTGATCATCTAAGGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTttcttc                                                                                                                   <  2:780090/149‑1 (MQ=255)                           cATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGc                                                                                                                 >  1:1184479/1‑149 (MQ=255)                                aGCACCTAAGGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGAcc                                                                                                            <  1:1251007/149‑1 (MQ=255)                                   aCCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGa                                                                                                         <  2:955268/149‑1 (MQ=255)                                   aCCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGa                                                                                                         <  2:1019506/149‑1 (MQ=255)                                    ccTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGAc                                                                                                        <  1:998818/149‑1 (MQ=255)                                         tGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATc                                                                                                   <  2:1294928/149‑1 (MQ=255)                                            ccgATGCGTCGTGAACCCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGAAGAGCCTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTc                                                                                                <  1:1111912/147‑1 (MQ=255)                                             ggctGCGTCGTGAACGCCTTATCCGGCCTACAACCGCAAGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCa                                                                                               <  1:779386/146‑1 (MQ=255)                                              gATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTCCTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAg                                                                                              <  1:931612/149‑1 (MQ=255)                                                        gAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGcc                                                                                    <  1:440933/149‑1 (MQ=255)                                                           cGCTTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGa                                                                                 <  2:1002386/149‑1 (MQ=255)                                                           cGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGa                                                                                 >  1:952097/1‑149 (MQ=255)                                                             ccTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAAACCGCCTGATg                                                                               >  1:791513/1‑149 (MQ=255)                                                               ttttCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTTCTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCa                                                                             <  2:703116/146‑1 (MQ=255)                                                                   gcGGCCTACAAACGGACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCGGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGt                                                                         <  2:318378/148‑1 (MQ=255)                                                                    cGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTCCTTTACTTCGCTTTGACGGTTTCTTCGCCGACCAGACCTGTCTTCAGGAAACCCGCCTGATGCAGCGTa                                                                        >  1:179625/1‑149 (MQ=255)                                                                    cGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTa                                                                        >  1:1041694/1‑149 (MQ=255)                                                                     ggCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGccacgtct                                                                       >  1:558420/1‑142 (MQ=255)                                                                     ggCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTAt                                                                       >  1:113127/1‑149 (MQ=255)                                                                        cTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCa                                                                                               >  1:810163/1‑122 (MQ=255)                                                                        cTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCa                                                                                               <  2:810163/122‑1 (MQ=255)                                                                        cTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACACGCCTGATGCACCGTATCCa                                                                    >  2:251926/1‑149 (MQ=255)                                                                          aCAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCAtt                                                                  <  1:1111634/149‑1 (MQ=255)                                                                             aaCGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTAcc                                                               >  1:55560/1‑149 (MQ=255)                                                                             aaCGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTAcc                                                               >  1:947086/1‑149 (MQ=255)                                                                                gCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCAtt                                                                  <  1:1100981/143‑1 (MQ=255)                                                                                gCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCAtt                                                                  >  2:1100981/1‑143 (MQ=255)                                                                                  aCGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTCCCTtcat                                                          >  1:905249/1‑149 (MQ=255)                                                                                      aGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAAc                                                      <  1:1220701/149‑1 (MQ=255)                                                                                        aTTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGt                                                    >  1:293385/1‑149 (MQ=255)                                                                                          tCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTttcttc                                                                                                                   >  2:929158/1‑84 (MQ=255)                                                                                          tCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTttcttc                                                                                                                   <  1:929158/84‑1 (MQ=255)                                                                                            agcATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTCCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCg                                                >  2:1032295/3‑149 (MQ=255)                                                                                            aaCATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCg                                                <  1:1089299/149‑1 (MQ=255)                                                                                              cATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTa                                              >  1:1070272/1‑149 (MQ=255)                                                                                                     cAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTACCCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACg                                       <  2:943180/149‑1 (MQ=255)                                                                                                     cAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACg                                       >  1:664030/1‑149 (MQ=255)                                                                                                      aaTAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACgg                                      >  1:262832/1‑149 (MQ=255)                                                                                                       aTAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTTTCGTAGTCGACGGt                                     >  2:1166543/1‑149 (MQ=255)                                                                                                         aGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGttt                                   >  2:235191/1‑149 (MQ=255)                                                                                                           aTTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCt                                                                                                      <  1:872764/80‑1 (MQ=255)                                                                                                           aTTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCt                                                                                                      >  2:872764/1‑80 (MQ=255)                                                                                                           aTTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTg                                 >  1:980935/1‑149 (MQ=255)                                                                                                                gTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTaa                                                                                          <  1:726682/87‑1 (MQ=255)                                                                                                                gTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTaa                                                                                          >  2:726682/1‑87 (MQ=255)                                                                                                                  ttgCCTGATGCGCTACGCTCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTGTGCGCTc                          >  1:1216152/3‑149 (MQ=255)                                                                                                                      cTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGAGGGTTTTGTCCGCTCGgaa                      >  1:70535/1‑149 (MQ=255)                                                                                                                      cTGATGAGCGTAGCGAATCAGGCAATTCTACTTTACTTCGCTTTGGCGGATTCTTCGGCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACATCTCGTAATCGACGGTTTTGTCCGCTCgggc                      >  1:608139/1‑147 (MQ=255)                                                                                                                       tgatgaGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACTTTCATCAACGTCTCGTAATCGACGGTTTTGTCCGCTCGgagg                     >  2:990070/1‑147 (MQ=255)                                                                                                                        gatgaGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGcc                                                                                    >  1:125373/1‑85 (MQ=255)                                                                                                                        gatgaGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGcc                                                                                    <  2:125373/85‑1 (MQ=255)                                                                                                                             gCGGAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGCCCTATCTTCAGGTAACCCGCCTGATGCAGCGGATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTGTCCGCTCGGAAGAAGAtg               <  1:593636/149‑1 (MQ=255)                                                                                                                              cGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTGTCCGCTCGGAAGAAGAtgg              >  1:66844/1‑149 (MQ=255)                                                                                                                              cGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAAGCGACGGTTTTGTCCGCTCGGAAGAAGAtgg              >  2:691143/1‑149 (MQ=255)                                                                                                                                caGCGCATCAGGCAATTCTACTGTACGTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTGTCCGCTCGGAAGAAGAtggtg            <  2:643948/148‑1 (MQ=255)                                                                                                                                   cgcATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCAGTAATATCGGCAACGTCTCGTAATCGACGGTTTTGTCCTCTCGGAAGAAAATGgtggtg         >  1:640026/1‑149 (MQ=255)                                                                                                                                   cgcATCAGGCAATTCTACTTTACTTCGCTTTGGCGGCTTCTTCGCCGACCAGACCTATATTAAGATATCGCAAGTGTGTCGTCTTATCCATTACCTTCATCCACGTCTCGTANTCTACGAGTTGTTCCGCTGTGAAGAAGAtgntactg         >  2:547983/1‑145 (MQ=255)                                                                                                                                      aTCAGGCAATTCTACTTTACTTCGTTTGGGGGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTGTCCGCTCGGGAGAACATGGTGGTGtct      >  2:13037/1‑149 (MQ=255)                                                                                                                                          ggCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTGTCCGCTCGGAAGAAGATGGTGGTGtctttct  >  1:947305/1‑149 (MQ=255)                                                                                                                                            |                                                                                                                                                   AGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAACGCACGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATGAGCGTAGCGCATCAGGCAATTCTACTTTACTTCGCTTTGGCGGTTTCTTCGCCGACCAGACCTATCTTCAGGTAACCCGCCTGATGCAGCGTATCCATTACCTTCATCAACGTCTCGTAATCGACGGTTTTGTCCGCTCGGAAGAAGATGGTGGTGTCTTTCT  >  NC_000913_3_bme_pgi/3150669‑3150954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.