New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 1559270	36 (0.610)	5 (0.090)	3/288	7.8	12.7%	coding (641/897 nt)	ddpC	D,D‑dipeptide ABC transporter permease
	?	NC_000913_3_bme_pgi	= 1559303	34 (0.600)					coding (608/897 nt)	ddpC	D,D‑dipeptide ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACCACTGATCGAGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAA  >  NC_000913_3_bme_pgi/1559127‑1559403                                                                                                                                                |                                                                                                                                      accacTGATCGAGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTTAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCaactggc                                                                                                                                 >  2:295752/1‑144 (MQ=255) accacTGATAGAGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGATGTTGAGCACCCAGGCCAATAAATACCAACGTGGCGGCCATTAAAATCGCGCTCCCGATATCAAGCGATGCCTGGACGAGCaactggc                                                                                                                                 >  2:46168/1‑144 (MQ=255)    acTGATCGAGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCCACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTa                                                                                                                              <  1:222428/150‑1 (MQ=255)    acTGATCGAGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTa                                                                                                                              <  1:798002/150‑1 (MQ=255)       gATCGAGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAggg                                                                                                                           >  2:409185/1‑150 (MQ=255)         tCGAGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAg                                                                                                                         <  1:777454/150‑1 (MQ=255)            aGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCCCCCAGGCCAATTATTCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGttt                                                                                                                      >  1:889555/1‑149 (MQ=255)            aGTACATAGTTGCGACCATTTGCTACCATCGCGCCACATTCAGCACTCGGTTGTTGAGCACCCATGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTa                                                                                                                      <  1:365440/150‑1 (MQ=255)              tACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAACATCGCGCTACCGATATCCAGAGATGCCTGCACGCTCAGCGGCGGTAGGGAGTTACg                                                                                                                    >  2:856905/1‑150 (MQ=255)              tACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTAGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGTCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACg                                                                                                                    >  2:860557/1‑150 (MQ=255)              tACATAGTTGCGACCATTTCCTACCAACGCGCCCCATTCAGCACTCGGTGGTTGAGCACCCATGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACg                                                                                                                    <  2:889555/150‑1 (MQ=255)                 aTAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAACTCCCACCGTGGCGGCCATTAAAATCGCGCTCCCGATATCCAGCCATGCCTGCACGATCAGCGGCGGGAGGGAGTTACGTaa                                                                                                                 >  2:815349/1‑150 (MQ=255)                       gCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCCCCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATg                                                                                                           >  1:536325/1‑150 (MQ=255)                            cATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCAAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGt                                                                                                      >  2:305762/1‑150 (MQ=255)                                tGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGAt                                                                                                  >  1:277780/1‑150 (MQ=255)                                       aTCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGc                                                                                           <  1:808884/150‑1 (MQ=255)                                       aTCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGc                                                                                           <  1:729680/150‑1 (MQ=255)                                        tCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGcc                                                                                          <  1:409185/150‑1 (MQ=255)                                            gcCCCATTCAGCACTCGGTTGTTGAGCACCCATTCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGCTCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACg                                                                                      <  2:58261/150‑1 (MQ=255)                                              cccAGTCCGCACTCGGTTGTTTAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTGGATCAGATGCCAACgag                                                                                    <  2:519984/150‑1 (MQ=255)                                                cATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGAc                                                                                  >  2:654746/1‑150 (MQ=255)                                                 aTTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCAAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGAcg                                                                                 <  1:453314/150‑1 (MQ=255)                                                     aGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGcc                                                                             <  2:567887/150‑1 (MQ=255)                                                               tgttgAGCACCCAGGCCAATAAATCCCAACTTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGTTAGGGAGTTACGTAAAATATGCAAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTc                                                                   <  2:460203/150‑1 (MQ=255)                                                                       aCCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTg                                                           <  2:277780/150‑1 (MQ=255)                                                                          cAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGACACGCGCCAAAGGTTTTCGCCGCCTGAAc                                                        >  2:56033/1‑150 (MQ=255)                                                                           aGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCAAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACa                                                       >  2:466889/1‑150 (MQ=255)                                                                              ccAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAg                                                    <  1:466889/150‑1 (MQ=255)                                                                                            cGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTTATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTAc                                      <  1:305762/150‑1 (MQ=255)                                                                                              gcgcggcCATATAAATCGCGCTACCGCTATCCAGCCATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGATAAATCTGCCAGTTGATCCGTTGCCTACGAGACGCGCCAAAGGTTGTCGCCGCCTGATCATAGGTATACTGGCGTACaa                                    <  2:557465/148‑1 (MQ=255)                                                                                                     cATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGc                             >  1:667570/1‑150 (MQ=255)                                                                                                     cATTAAAATCGCGCTACAGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGc                             >  2:938820/1‑150 (MQ=255)                                                                                                      aTTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCt                            >  1:536533/1‑150 (MQ=255)                                                                                                               gcgcTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCcgc                   >  1:720739/1‑150 (MQ=255)                                                                                                                   tACAGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGCACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGccc               >  2:581037/1‑149 (MQ=255)                                                                                                                           tCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGcaca       >  1:781454/1‑150 (MQ=255)                                                                                                                              aGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTGGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCCGGCGCACATaa    >  1:665170/1‑150 (MQ=255)                                                                                                                                cGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATaaaa  >  2:310706/1‑150 (MQ=255)                                                                                                                                                |                                                                                                                                      ACCACTGATCGAGTACATAGTTGCGACCATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAA  >  NC_000913_3_bme_pgi/1559127‑1559403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.