New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 1559270	36 (0.610)	5 (0.090)	3/288	7.8	12.7%	coding (641/897 nt)	ddpC	D,D‑dipeptide ABC transporter permease
	?	NC_000913_3_bme_pgi	= 1559303	34 (0.600)					coding (608/897 nt)	ddpC	D,D‑dipeptide ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATGGCGTTAAACAAACTCGG  >  NC_000913_3_bme_pgi/1559154‑1559451                                                                                                                                                      |                                                                                                                                                     cATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCAAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGt                                                                                                                                                      >  2:305762/1‑150 (MQ=255)     tGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGAt                                                                                                                                                  >  1:277780/1‑150 (MQ=255)            aTCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGc                                                                                                                                           <  1:729680/150‑1 (MQ=255)            aTCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGc                                                                                                                                           <  1:808884/150‑1 (MQ=255)             tCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGcc                                                                                                                                          <  1:409185/150‑1 (MQ=255)                 gcCCCATTCAGCACTCGGTTGTTGAGCACCCATTCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGCTCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACg                                                                                                                                      <  2:58261/150‑1 (MQ=255)                   cccAGTCCGCACTCGGTTGTTTAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTGGATCAGATGCCAACgag                                                                                                                                    <  2:519984/150‑1 (MQ=255)                     cATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGAc                                                                                                                                  >  2:654746/1‑150 (MQ=255)                      aTTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCAAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGAcg                                                                                                                                 <  1:453314/150‑1 (MQ=255)                          aGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGcc                                                                                                                             <  2:567887/150‑1 (MQ=255)                                    tgttgAGCACCCAGGCCAATAAATCCCAACTTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGTTAGGGAGTTACGTAAAATATGCAAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTc                                                                                                                   <  2:460203/150‑1 (MQ=255)                                            aCCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTg                                                                                                           <  2:277780/150‑1 (MQ=255)                                               cAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGACACGCGCCAAAGGTTTTCGCCGCCTGAAc                                                                                                        >  2:56033/1‑150 (MQ=255)                                                aGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCAAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACa                                                                                                       >  2:466889/1‑150 (MQ=255)                                                   ccAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAg                                                                                                    <  1:466889/150‑1 (MQ=255)                                                                 cGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTTATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTAc                                                                                      <  1:305762/150‑1 (MQ=255)                                                                   gcgcggcCATATAAATCGCGCTACCGCTATCCAGCCATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGATAAATCTGCCAGTTGATCCGTTGCCTACGAGACGCGCCAAAGGTTGTCGCCGCCTGATCATAGGTATACTGGCGTACaa                                                                                    <  2:557465/148‑1 (MQ=255)                                                                          cATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGc                                                                             >  1:667570/1‑150 (MQ=255)                                                                          cATTAAAATCGCGCTACAGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGc                                                                             >  2:938820/1‑150 (MQ=255)                                                                           aTTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCt                                                                            >  1:536533/1‑150 (MQ=255)                                                                                    gcgcTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCcgc                                                                   >  1:720739/1‑150 (MQ=255)                                                                                        tACAGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGCACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGccc                                                               >  2:581037/1‑149 (MQ=255)                                                                                                tCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGcaca                                                       >  1:781454/1‑150 (MQ=255)                                                                                                   aGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTGGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCCGGCGCACATaa                                                    >  1:665170/1‑150 (MQ=255)                                                                                                     cGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATaaaa                                                  >  2:310706/1‑150 (MQ=255)                                                                                                                        ggcggTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCAcaatagca                               >  2:146077/1‑150 (MQ=255)                                                                                                                                   gTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCAt                    >  1:488545/1‑150 (MQ=255)                                                                                                                                     tACGTAAAATATGCCAGTTGATCAGAGGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATgg                  <  2:375101/150‑1 (MQ=255)                                                                                                                                       cGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGCCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCAAAATAGCAATAGCCAGCATGGCg                >  1:814628/1‑150 (MQ=255)                                                                                                                                        gTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGCACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATGGCGt               >  1:793786/1‑150 (MQ=255)                                                                                                                                          aaaaTATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATGGCGTTa             <  1:856905/150‑1 (MQ=255)                                                                                                                                          aaaaTATGCCAGTTGATCAGATGCCAACGAGAAGCGCCAAAGGTTTTCGCCGCCTGAACATATGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATGGCGTTa             <  1:860557/150‑1 (MQ=255)                                                                                                                                           aaaTATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATGGCGTTaa            >  2:882977/1‑150 (MQ=255)                                                                                                                                              tatGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATGGCGTTaaaca         <  2:488545/150‑1 (MQ=255)                                                                                                                                                  ccAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATGGCGTTAAACAAACt     <  1:310706/150‑1 (MQ=255)                                                                                                                                                     gTTGATCAGATGCCAACGAGCCGCGCCAAAGGTTTTCGCCGCCTGCACATAGGTATACTGGCGTACCACTAATGCTTGCCCCCGCGCCAGGCGAACATATAAGGGAATTCGCACAATAGCTATAGCCCGCCTGGCGGGAAACAAACTCgg  >  2:692930/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CATTTGCTACCATCGCGCCCCATTCAGCACTCGGTTGTTGAGCACCCAGGCCAATAAATCCCAACGTGGCGGCCATTAAAATCGCGCTACCGATATCCAGCGATGCCTGCACGATCAGCGGCGGTAGGGAGTTACGTAAAATATGCCAGTTGATCAGATGCCAACGAGACGCGCCAAAGGTTTTCGCCGCCTGAACATAGGTATACTGGCGTACAACTAATGCTTGCCCCCGCGCCAGGCGCACATAAAAGGGAATTCGCACAATAGCAATAGCCAGCATGGCGTTAAACAAACTCGG  >  NC_000913_3_bme_pgi/1559154‑1559451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.