Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913_3_hsa_pgi 3,993,001 Δ6 bp coding (1849‑1854/2547 nt) cyaA → adenylate cyclase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 39930001 (0.010)101 (1.080) 74/296 0.1 99.0% coding (1848/2547 nt) cyaA adenylate cyclase
?NC_000913_3_hsa_pgi 3993007 = 1 (0.010)coding (1855/2547 nt) cyaA adenylate cyclase

Only 100 of 103 total aligned reads displayed.

GCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTC  >  NC_000913_3_hsa_pgi/3992852‑3993148
                                                                                                                                                    |                                                                                                                                                    
gCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCgatg                                                                                                                                                      <  2:475690/149‑1 (MQ=255)
   aTCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgcc                                                                                                                                                   <  1:489192‑M1/149‑4 (MQ=255)
     cAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccct                                                                                                                                                 <  1:64924‑M1/149‑6 (MQ=255)
       ggtggtGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGCCCTGCTGTACCGCAACTCGTGGCACGCAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctga                                                                                                                                               >  2:1023790‑M1/1‑142 (MQ=255)
        gtggtgCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCACCTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaa                                                                                                                                              >  1:323289‑M1/1‑141 (MQ=255)
         tggtgCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaa                                                                                                                                             >  1:272680‑M1/1‑140 (MQ=255)
               aTTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactatt                                                                                                                                       >  2:1490795‑M1/1‑134 (MQ=255)
                tttCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattc                                                                                                                                      >  2:503557‑M1/1‑133 (MQ=255)
                tttCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGAAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattc                                                                                                                                      >  1:817090‑M1/1‑133 (MQ=255)
                  tCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCTATGgccctgaaaactattctc                                                                                                                                    <  2:18949‑M1/149‑19 (MQ=255)
                   cGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcg                                                                                                                                   <  1:1355266‑M1/149‑20 (MQ=255)
                    gATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcgg                                                                                                                                  >  2:928265‑M1/1‑129 (MQ=255)
                      tttCGGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggca                                                                                                                                >  1:1291495‑M1/1‑127 (MQ=255)
                       ttCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaa                                                                                                                               >  1:885985‑M1/1‑126 (MQ=255)
                          cGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaat                                                                                                                            >  2:779249‑M1/1‑123 (MQ=255)
                               gCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatc                                                                                                                       >  1:1209624‑M1/1‑118 (MQ=255)
                                cgggatGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCTACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatca                                                                                                                      <  1:1440684‑M1/147‑33 (MQ=255)
                                cTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatca                                                                                                                      <  2:1181145‑M1/149‑33 (MQ=255)
                                cTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatca                                                                                                                      <  1:163381‑M1/149‑33 (MQ=255)
                                  ggATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcagg                                                                                                                    >  1:217608‑M1/1‑115 (MQ=255)
                                   gATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcagga                                                                                                                   >  1:885012‑M1/1‑114 (MQ=255)
                                     tGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacg                                                                                                                 >  2:675898‑M1/1‑112 (MQ=255)
                                      ttcTTCATCTTTGTCGAGAATAAAACTTGCCTGGTAGGTAGCGTTGACCTGCTGTACCTCAACTAGTGGACAGAAGTGCGTACGCTGCAATTCAACGGCGAGCAATCGATGgccctgaaaactattctcgtaaaaatgcatcaggacgc                                                                                                                <  2:347212‑M1/148‑39 (MQ=255)
                                      gtgttcagCTTTGGCGCGTATAAAAATTGCGTGGTAGGTAGCGTTGACCTGCTGTTCCGGATCTCGTGGAACGAAGTGCGTACGGTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgc                                                                                                                <  2:341776‑M1/146‑39 (MQ=255)
                                          tCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgca                                                                                                            >  1:1227600‑M1/1‑107 (MQ=255)
                                                   gCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagat                                                                                                   <  2:885985‑M1/149‑52 (MQ=255)
                                                     gagaATCAAAATAGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTAAGCAGCACTTAAACGGCGAGAAATCGATGgcactgaaaactattctcggcaaatagcatcacgacgccgcaccgccagaaag                                                                                                 >  1:689861‑M1/1‑96 (MQ=255)
                                                        aaTCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcgtcaaaatgcttcaggacgccgcaccgccagatagcgg                                                                                              >  2:1517797‑M1/1‑93 (MQ=255)
                                                        aaTCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgt                                                                                              <  2:1227600‑M1/149‑57 (MQ=255)
                                                         aTCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtg                                                                                             <  2:1209624‑M1/149‑58 (MQ=255)
                                                           cAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtgga                                                                                           >  2:681856‑M1/1‑90 (MQ=255)
                                                            aaaaTTGCCTTGTAGGTAGCGTTGACCTGCTGTACCGGAACTCGTGTTACGAAGTGCGTTCGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaatctattctcggcaaaatgaatctggacgccgcaccgccagatagcgtggaa                                                                                          <  1:1298399‑M1/149‑61 (MQ=255)
                                                            aaaaTTGCCTGGTAGGTAGCGTTGACCTGCTGTACCTCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaa                                                                                          <  1:1490795‑M1/149‑61 (MQ=255)
                                                            aaaaTTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaa                                                                                          <  2:1248941‑M1/149‑61 (MQ=255)
                                                            aaaaTTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaa                                                                                          <  2:217608‑M1/149‑61 (MQ=255)
                                                             aaaTTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaag                                                                                         >  2:754109‑M1/1‑88 (MQ=255)
                                                             aaaTTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTCCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaag                                                                                         >  2:923853‑M1/1‑88 (MQ=255)
                                                                ttGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtct                                                                                      >  1:768394‑M1/1‑85 (MQ=255)
                                                                 tGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtctt                                                                                     <  1:1282431‑M1/149‑66 (MQ=255)
                                                                  gCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGAAACGAAGAGCGTACGCTGCACTTCAACGGCGAGCAATCGATGcccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttc                                                                                    >  2:1170417‑M1/1‑83 (MQ=255)
                                                                   ccTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttct                                                                                   <  2:939483‑M1/149‑68 (MQ=255)
                                                                   ccTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGAGGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttct                                                                                   <  1:612897‑M1/149‑68 (MQ=255)
                                                                    cTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctg                                                                                  >  1:1239746‑M1/1‑81 (MQ=255)
                                                                     tGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgt                                                                                 <  2:1239746‑M1/149‑70 (MQ=255)
                                                                          ggtagCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatag                                                                            <  1:503557‑M1/149‑75 (MQ=255)
                                                                          ggtagCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatag                                                                            <  1:593985‑M1/149‑75 (MQ=255)
                                                                            tagCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagcc                                                                          <  1:1209161‑M1/149‑77 (MQ=255)
                                                                              gCGTTGCCCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccag                                                                        <  1:779249‑M1/149‑79 (MQ=255)
                                                                              gCGTTGACCTGCGGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcagcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccag                                                                        <  2:166817‑M1/149‑79 (MQ=255)
                                                                               cGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagc                                                                       <  2:768394‑M1/149‑80 (MQ=255)
                                                                               cGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagc                                                                       >  1:428755‑M1/1‑70 (MQ=255)
                                                                                gTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgccccgccagagagcgtggaagtcttctgttatagccagca                                                                      >  2:482740‑M1/1‑69 (MQ=255)
                                                                                   gACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatct                                                                   <  2:1472467‑M1/149‑84 (MQ=255)
                                                                                     catgctgTCACGCAATTCGTGGATTGAAGTGCTTACGCGGCACTTCAACTGCGAGCACTC‑‑‑‑ATTG‑‑GCCCGGATAAGTATTCTCGGCAAAATGCATCAGGACGCCTCACCGCCAGATAGCGTGTAAGTCTTCTGTTATAGCCAGCATCTgc                                                           <  1:1035215/147‑1 (MQ=255)
                                                                                      ctgctgTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcg                                                                >  1:84995‑M1/1‑63 (MQ=255)
                                                                                       tgctgTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgc                                                               >  1:295526‑M1/1‑62 (MQ=255)
                                                                                        gctgTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaacctattctcggcaaaatgcatcaggacgccgccccgccagatcgcgtggaagtcttctgttatagccagcatctgcgcg                                                              >  2:526831‑M1/1‑61 (MQ=255)
                                                                                            tACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggctt                                                          >  1:7149‑M1/1‑57 (MQ=255)
                                                                                            tACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggaaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgtaatagccagaatctgcgcggctt                                                          >  1:835785‑M1/1‑57 (MQ=255)
                                                                                              ccGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcctcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcgtaa                                                        >  2:1042173‑M1/1‑55 (MQ=255)
                                                                                              ccGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaa                                                        >  1:1009779‑M1/1‑55 (MQ=255)
                                                                                                 cAACTCGTGGAACGAAGTGCGTTCGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattc                                                     <  2:378164‑M1/149‑98 (MQ=255)
                                                                                                 cAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattc                                                     <  2:323289‑M1/149‑98 (MQ=255)
                                                                                                 cAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattc                                                     >  1:163990‑M1/1‑52 (MQ=255)
                                                                                                   aCTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatccatcaggacgccgcaccgacagatagcgtggaagtcttctgttatagccagcatctgcccggcttaattcgt                                                   >  1:168495‑M1/1‑50 (MQ=255)
                                                                                                    cTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgta                                                  <  1:675898‑M1/149‑101 (MQ=255)
                                                                                                     tCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtac                                                 >  2:1320194‑M1/1‑48 (MQ=255)
                                                                                                         ggAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgc                                             >  1:866755‑M1/1‑44 (MQ=255)
                                                                                                           aaCGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgt                                           <  1:928265‑M1/149‑108 (MQ=255)
                                                                                                           aaCGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcgtacttcgtaatcgcgt                                           >  1:1487490‑M1/1‑42 (MQ=255)
                                                                                                            aCGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtg                                          >  2:208068‑M1/1‑41 (MQ=255)
                                                                                                            aCGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtg                                          >  2:740502‑M1/1‑41 (MQ=255)
                                                                                                               aaGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgcgagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcag                                       >  1:498654‑M1/1‑38 (MQ=255)
                                                                                                               aaGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcag                                       >  2:1348289‑M1/1‑38 (MQ=255)
                                                                                                                  tGCGTACGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaa                                    >  1:1317308‑M1/1‑35 (MQ=255)
                                                                                                                        cGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagattgcgtggaagtcttctgttatagccagcatctgcgcggcttatttcgtactcgcgtgcagcacctggtt                              >  2:782582‑M1/1‑29 (MQ=255)
                                                                                                                        cGCTGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtt                              >  2:1488578‑M1/1‑29 (MQ=255)
                                                                                                                           tGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttct                           >  2:1526861‑M1/1‑26 (MQ=255)
                                                                                                                           tGCACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttct                           <  2:866755‑M1/149‑124 (MQ=255)
                                                                                                                            gCACTCCAACTGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctg                          <  1:923853‑M1/149‑125 (MQ=255)
                                                                                                                             cACTTCAACGGCGAGCAATCGATTgccctgaaaactattctttgcaaaatgcatcaggacgccgcaccgccagatagcgtgtaagtcttctgttatagccagcatctgcgcgtcttaattcgtactcgcgtgcagcaactggtttctga                         <  1:109769‑M1/149‑126 (MQ=255)
                                                                                                                             cACTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcttcaggactccgcacctccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctga                         <  2:817090‑M1/149‑126 (MQ=255)
                                                                                                                               cTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttatttcgtactcgcgtgcagcaactggtttctgagt                       <  1:1170417‑M1/149‑128 (MQ=255)
                                                                                                                               cTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagt                       <  2:23374‑M1/149‑128 (MQ=255)
                                                                                                                               cTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagt                       <  1:754109‑M1/149‑128 (MQ=255)
                                                                                                                               cTTCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgcagcaccgcaagatagcgtggaagtcttctgttaaagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagt                       <  2:272680‑M1/149‑128 (MQ=255)
                                                                                                                                ttCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtg                      >  1:911292‑M1/1‑21 (MQ=255)
                                                                                                                                ttCAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtg                      >  2:707915‑M1/1‑21 (MQ=255)
                                                                                                                                 tCAACGTCGAGCAATCGATGgccctgaaaactattctcggcaaattgcttcaggacgccgcaccgccagatatcgtggaagtcttctgttatagccatcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgt                     <  2:428755‑M1/149‑130 (MQ=255)
                                                                                                                                  cAACGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgta                    >  2:623329‑M1/1‑19 (MQ=255)
                                                                                                                                   aaCGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtat                   <  1:681856‑M1/149‑132 (MQ=255)
                                                                                                                                   aaCGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtat                   >  1:1326142‑M1/1‑18 (MQ=255)
                                                                                                                                    aCGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtatt                  <  2:295526‑M1/149‑133 (MQ=255)
                                                                                                                                    aCGGCGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaaggcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtatt                  <  1:1023790‑M1/149‑133 (MQ=255)
                                                                                                                                        cGAGCAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaat              >  1:484677‑M1/1‑13 (MQ=255)
                                                                                                                                            cAATCGATGgccctgaaaactattctcggcaatatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcagctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaattgcg          <  1:750408‑M1/149‑141 (MQ=255)
                                                                                                                                            cAATCGATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaattgcg          <  1:450555‑M1/149‑141 (MQ=255)
                                                                                                                                                 gATGgccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaattgtgtcttt     >  2:1441286‑M1/1‑4 (MQ=255)
                                                                                                                                                    ggccctgaaaactattctcggcaaaatgcatcaggacgccgctccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcataattcgtactcgcgtgcagcaactggtatctgagtgtaatgaattgcgtctttcca  <  1:234478‑M1/149‑149 (MQ=255)
                                                                                                                                                    ggccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaattgcgtctttcca  <  2:911292‑M1/149‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTC  >  NC_000913_3_hsa_pgi/3992852‑3993148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.