Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913_3_hsa_pgi 3,993,001 Δ6 bp coding (1849‑1854/2547 nt) cyaA → adenylate cyclase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 39930001 (0.010)101 (1.080) 74/296 0.1 99.0% coding (1848/2547 nt) cyaA adenylate cyclase
?NC_000913_3_hsa_pgi 3993007 = 1 (0.010)coding (1855/2547 nt) cyaA adenylate cyclase

Only 100 of 102 total aligned reads displayed.

TGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCA  >  NC_000913_3_hsa_pgi/3992861‑3993154
                                                                                                                                                  |                                                                                                                                                   
atcaggtggtgcatttcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGcc                                                                                                                                                   <  1:489192‑M2/3‑1 (MQ=255)
  caggtggtgcatttcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCt                                                                                                                                                 <  1:64924‑M2/5‑1 (MQ=255)
    ggtggtgcatttcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgccctgctgtaccgcaactcgtggcacgcagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGa                                                                                                                                               >  2:1023790‑M2/143‑149 (MQ=255)
     gtggtgcatttcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcacctcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGaa                                                                                                                                              >  1:323289‑M2/142‑149 (MQ=255)
      tggtgcatttcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGaaa                                                                                                                                             >  1:272680‑M2/141‑149 (MQ=255)
            atttcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTAtt                                                                                                                                       >  2:1490795‑M2/135‑149 (MQ=255)
             tttcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATtc                                                                                                                                      >  2:503557‑M2/134‑149 (MQ=255)
             tttcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgaaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATtc                                                                                                                                      >  1:817090‑M2/134‑149 (MQ=255)
               tcgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatctatgGCCCTGAAAACTATtctc                                                                                                                                    <  2:18949‑M2/18‑1 (MQ=255)
                cgatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCg                                                                                                                                   <  1:1355266‑M2/19‑1 (MQ=255)
                 gatttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCgg                                                                                                                                  >  2:928265‑M2/130‑149 (MQ=255)
                   tttcggtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCa                                                                                                                                >  1:1291495‑M2/128‑149 (MQ=255)
                    ttccgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCaa                                                                                                                               >  1:885985‑M2/127‑149 (MQ=255)
                       cgtaagctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAAt                                                                                                                            >  2:779249‑M2/124‑149 (MQ=255)
                            gctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATc                                                                                                                       >  1:1209624‑M2/119‑149 (MQ=255)
                             ctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCa                                                                                                                      <  2:1181145‑M2/32‑1 (MQ=255)
                             ctggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCa                                                                                                                      <  1:163381‑M2/32‑1 (MQ=255)
                             cgggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttctacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCa                                                                                                                      <  1:1440684‑M2/32‑1 (MQ=255)
                               ggatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAgg                                                                                                                    >  1:217608‑M2/116‑149 (MQ=255)
                                gatgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGa                                                                                                                   >  1:885012‑M2/115‑149 (MQ=255)
                                  tgtcttcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGAcg                                                                                                                 >  2:675898‑M2/113‑149 (MQ=255)
                                   ttcttcatctttgtcgagaataaaacttgcctggtaggtagcgttgacctgctgtacctcaactagtggacagaagtgcgtacgctgcaattcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGTAAAAATGCATCAGGAcgc                                                                                                                <  2:347212‑M2/38‑1 (MQ=255)
                                   gtgttcagctttggcgcgtataaaaattgcgtggtaggtagcgttgacctgctgttccggatctcgtggaacgaagtgcgtacggtgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGAcgc                                                                                                                <  2:341776‑M2/38‑1 (MQ=255)
                                       tcagctttggcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCa                                                                                                            >  1:1227600‑M2/108‑149 (MQ=255)
                                                gcgagaatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGAt                                                                                                   <  2:885985‑M2/51‑1 (MQ=255)
                                                  gagaatcaaaatagcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtaagcagcacttaaacggcgagaaatcgatgGCACTGAAAACTATTCTCGGCAAATAGCATCACGACGCCGCACCGCCAGAAAg                                                                                                 >  1:689861‑M2/97‑149 (MQ=255)
                                                     aatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGTCAAAATGCTTCAGGACGCCGCACCGCCAGATAGcgg                                                                                              >  2:1517797‑M2/94‑148 (MQ=255)
                                                     aatcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGt                                                                                              <  2:1227600‑M2/56‑1 (MQ=255)
                                                      atcaaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTg                                                                                             <  2:1209624‑M2/57‑1 (MQ=255)
                                                        caaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGa                                                                                           >  2:681856‑M2/91‑149 (MQ=255)
                                                         aaaattgccttgtaggtagcgttgacctgctgtaccggaactcgtgttacgaagtgcgttcgctgcacttcaacggcgagcaatcgatgGCCCTGAAATCTATTCTCGGCAAAATGAATCTGGACGCCGCACCGCCAGATAGCGTGGaa                                                                                          <  1:1298399‑M2/60‑1 (MQ=255)
                                                         aaaattgcctggtaggtagcgttgacctgctgtacctcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGaa                                                                                          <  1:1490795‑M2/60‑1 (MQ=255)
                                                         aaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGaa                                                                                          <  2:217608‑M2/60‑1 (MQ=255)
                                                         aaaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGaa                                                                                          <  2:1248941‑M2/60‑1 (MQ=255)
                                                          aaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAg                                                                                         >  2:754109‑M2/89‑149 (MQ=255)
                                                          aaattgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcactccaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAg                                                                                         >  2:923853‑M2/89‑149 (MQ=255)
                                                             ttgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGtct                                                                                      >  1:768394‑M2/86‑149 (MQ=255)
                                                              tgcctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGtctt                                                                                     <  1:1282431‑M2/65‑1 (MQ=255)
                                                               gcctggtaggtagcgttgacctgctgtaccgcaactcgtgaaacgaagagcgtacgctgcacttcaacggcgagcaatcgatgCCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGtcttc                                                                                    >  2:1170417‑M2/84‑149 (MQ=255)
                                                                cctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGtcttct                                                                                   <  2:939483‑M2/67‑1 (MQ=255)
                                                                cctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgaggGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGtcttct                                                                                   <  1:612897‑M2/67‑1 (MQ=255)
                                                                 ctggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTg                                                                                  >  1:1239746‑M2/82‑149 (MQ=255)
                                                                  tggtaggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGt                                                                                 <  2:1239746‑M2/69‑1 (MQ=255)
                                                                       ggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAg                                                                            <  1:503557‑M2/74‑1 (MQ=255)
                                                                       ggtagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAg                                                                            <  1:593985‑M2/74‑1 (MQ=255)
                                                                         tagcgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGcc                                                                          <  1:1209161‑M2/76‑1 (MQ=255)
                                                                           gcgttgccctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAg                                                                        <  1:779249‑M2/78‑1 (MQ=255)
                                                                           gcgttgacctgcggtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCAGCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAg                                                                        <  2:166817‑M2/78‑1 (MQ=255)
                                                                            cgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGc                                                                       >  1:428755‑M2/71‑149 (MQ=255)
                                                                            cgttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGc                                                                       <  2:768394‑M2/79‑1 (MQ=255)
                                                                            catgctgTCACGCAATTCGTGGATTGAAGTGCTTACGCGGCACTTCAACTGCGAGCACTC‑‑‑‑ATTG‑‑GCCCGGATAAGTATTCTCGGCAAAATGCATCAGGACGCCTCACCGCCAGATAGCGTGTAAGTCTTCTGTTATAGCCAGCATCTgc                                                                 <  1:1035215/147‑1 (MQ=255)
                                                                             gttgacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCCCCGCCAGAGAGCGTGGAAGTCTTCTGTTATAGCCAGCa                                                                      >  2:482740‑M2/70‑149 (MQ=255)
                                                                                gacctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCt                                                                   <  2:1472467‑M2/83‑1 (MQ=255)
                                                                                   ctgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTgcg                                                                >  1:84995‑M2/64‑149 (MQ=255)
                                                                                    tgctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTgcgc                                                               >  1:295526‑M2/63‑149 (MQ=255)
                                                                                     gctgtaccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAACCTATTCTCGGCAAAATGCATCAGGACGCCGCCCCGCCAGATCGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGcgcg                                                              >  2:526831‑M2/62‑149 (MQ=255)
                                                                                         taccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCtt                                                          >  1:7149‑M2/58‑149 (MQ=255)
                                                                                         taccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGAAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTAATAGCCAGAATCTGCGCGGCtt                                                          >  1:835785‑M2/58‑149 (MQ=255)
                                                                                           ccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCCTCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCGTaa                                                        >  2:1042173‑M2/56‑149 (MQ=255)
                                                                                           ccgcaactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTaa                                                        >  1:1009779‑M2/56‑149 (MQ=255)
                                                                                              caactcgtggaacgaagtgcgttcgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTc                                                     <  2:378164‑M2/97‑1 (MQ=255)
                                                                                              caactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTc                                                     <  2:323289‑M2/97‑1 (MQ=255)
                                                                                              caactcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTc                                                     >  1:163990‑M2/53‑149 (MQ=255)
                                                                                                actcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATCCATCAGGACGCCGCACCGACAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCCCGGCTTAATTCGt                                                   >  1:168495‑M2/51‑149 (MQ=255)
                                                                                                 ctcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTa                                                  <  1:675898‑M2/100‑1 (MQ=255)
                                                                                                  tcgtggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTAc                                                 >  2:1320194‑M2/49‑149 (MQ=255)
                                                                                                      ggaacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTcgc                                             >  1:866755‑M2/45‑149 (MQ=255)
                                                                                                        aacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGt                                           <  1:928265‑M2/107‑1 (MQ=255)
                                                                                                        aacgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCGTACTTCGTAATCGCGt                                           >  1:1487490‑M2/43‑149 (MQ=255)
                                                                                                         acgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTg                                          >  2:208068‑M2/42‑149 (MQ=255)
                                                                                                         acgaagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTg                                          >  2:740502‑M2/42‑149 (MQ=255)
                                                                                                            aagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCGAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTgcag                                       >  1:498654‑M2/39‑149 (MQ=255)
                                                                                                            aagtgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTgcag                                       >  2:1348289‑M2/39‑149 (MQ=255)
                                                                                                               tgcgtacgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCaa                                    >  1:1317308‑M2/36‑149 (MQ=255)
                                                                                                                     cgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATTGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTATTTCGTACTCGCGTGCAGCACCTGGtt                              >  2:782582‑M2/30‑149 (MQ=255)
                                                                                                                     cgctgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGtt                              >  2:1488578‑M2/30‑149 (MQ=255)
                                                                                                                        tgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCt                           <  2:866755‑M2/123‑1 (MQ=255)
                                                                                                                        tgcacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCt                           >  2:1526861‑M2/27‑149 (MQ=255)
                                                                                                                         gcactccaactgcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTg                          <  1:923853‑M2/124‑1 (MQ=255)
                                                                                                                          cacttcaacggcgagcaatcgattGCCCTGAAAACTATTCTTTGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGTAAGTCTTCTGTTATAGCCAGCATCTGCGCGTCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGa                         <  1:109769‑M2/125‑1 (MQ=255)
                                                                                                                          cacttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCTTCAGGACTCCGCACCTCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGa                         <  2:817090‑M2/125‑1 (MQ=255)
                                                                                                                            cttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTATTTCGTACTCGCGTGCAGCAACTGGTTTCTGAgt                       <  1:1170417‑M2/127‑1 (MQ=255)
                                                                                                                            cttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgt                       <  2:23374‑M2/127‑1 (MQ=255)
                                                                                                                            cttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgt                       <  1:754109‑M2/127‑1 (MQ=255)
                                                                                                                            cttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCAGCACCGCAAGATAGCGTGGAAGTCTTCTGTTAAAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgt                       <  2:272680‑M2/127‑1 (MQ=255)
                                                                                                                             ttcaacggcgagcaatcgatgGCCCTTAAAACTATTCTCGTCAAAATGCATCAGGACGCCGCACCGCAAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgtg                      >  2:1519152‑M2/22‑149 (MQ=255)
                                                                                                                             ttcaacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgtg                      >  2:707915‑M2/22‑149 (MQ=255)
                                                                                                                              tcaacgtcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAATTGCTTCAGGACGCCGCACCGCCAGATATCGTGGAAGTCTTCTGTTATAGCCATCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgtgt                     <  2:428755‑M2/129‑1 (MQ=255)
                                                                                                                               caacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTa                    >  2:623329‑M2/20‑149 (MQ=255)
                                                                                                                                aacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTAt                   <  1:681856‑M2/131‑1 (MQ=255)
                                                                                                                                aacggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTAt                   >  1:1326142‑M2/19‑149 (MQ=255)
                                                                                                                                 acggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTAtt                  <  2:295526‑M2/132‑1 (MQ=255)
                                                                                                                                 acggcgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGGCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTAtt                  <  1:1023790‑M2/132‑1 (MQ=255)
                                                                                                                                     cgagcaatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAAt              >  1:484677‑M2/14‑149 (MQ=255)
                                                                                                                                         caatcgatgGCCCTGAAAACTATTCTCGGCAATATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCAGCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCg          <  1:750408‑M2/140‑1 (MQ=255)
                                                                                                                                         caatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCg          <  1:450555‑M2/140‑1 (MQ=255)
                                                                                                                                          aatcgatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGt         <  1:623329‑M2/141‑1 (MQ=255)
                                                                                                                                              gatgGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGTGTCttt     >  2:1441286‑M2/5‑149 (MQ=255)
                                                                                                                                                 gGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCTCCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCATAATTCGTACTCGCGTGCAGCAACTGGTATCTGAGTGTAATGAATTGCGTCTTTCCa  <  1:234478‑M2/148‑1 (MQ=255)
                                                                                                                                                 gGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCa  <  2:911292‑M2/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
TGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCA  >  NC_000913_3_hsa_pgi/3992861‑3993154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.