BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	4233518 =	1201 (12.850)	48 (0.580)	20/264	3.8	4.4%	intergenic (‑285/‑2416)	lysC/yjbE	lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
*	?	NC_000913_3_hsa_pgi	4233534 =	1027 (12.330)	48 (0.580)	20/264	3.8	4.4%	intergenic (‑301/‑2400)	lysC/yjbE	lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1203 total aligned reads displayed.

GCTTCTGGTGACAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATT  >  NC_000913_3_hsa_pgi/4233370‑4233666

gcgtCTGGTGACAACCCAGGGGAGGCAGCCCCTGTAGCCGATGATGACCGGGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGc                                                                                                                                                      <  2:871424/146‑1 (MQ=255)

  ttCTGGTGACAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCCCAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCt                                                                                                                                                    >  1:1201555/1‑149 (MQ=255)

    atGGTGACAACCCAGGGGATTAAGCCCCTGTAGCCGATGAGGACCGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGGTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTgc                                                                                                                                                  <  2:113840/148‑1 (MQ=255)

     tGGTGACAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCACCACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTgcg                                                                                                                                                 >  1:1156820/1‑149 (MQ=255)

     tGGTGACAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGAGGCAACCCCTCAGGTGTTATCACAGGACTGGCTCATCCCACACCGTTACTTGGGCAACGCGCGTCTTCTCGCCTgcg                                                                                                                                                 >  2:1012605/1‑149 (MQ=255)

        tGACAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTa                                                                                                                                              >  2:808670/1‑149 (MQ=255)

        tGACAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCATCCAACACCGTTCCTTGGGCAACGCGCCTCTTCTGGCCTGCGGTa                                                                                                                                              >  1:133180/1‑149 (MQ=255)

        tGACAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACGGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTgcgcgt                                                                                                                                              >  1:460882/1‑147 (MQ=255)

          aCAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGACCGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAgc                                                                                                                                            <  2:1387831/149‑1 (MQ=255)

          aCAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAgc                                                                                                                                            <  2:279702/149‑1 (MQ=255)

          aCAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGAGGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCACCAACAACGTGAAATGGGCAACGCGCCTCTTCTGGCCTGCGCTAgc                                                                                                                                            >  2:533919/1‑149 (MQ=255)

             aCCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCa                                                                                                                                         <  1:1477343/149‑1 (MQ=255)

             aCCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGGGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCa                                                                                                                                         <  2:851364/149‑1 (MQ=255)

              cccAGGGCATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAg                                                                                                                                        <  2:747441/149‑1 (MQ=255)

               ccAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAgg                                                                                                                                       <  2:765909/149‑1 (MQ=255)

               ccAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAgg                                                                                                                                       >  1:259090/1‑149 (MQ=255)

               ccAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAgg                                                                                                                                       <  2:195267/149‑1 (MQ=255)

                cAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTTTCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAggc                                                                                                                                      <  1:764747/149‑2 (MQ=255)

                cAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAggc                                                                                                                                      <  1:1073367/149‑2 (MQ=255)

                  ggggATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGACCTGCGCTAGCGCAggcca                                                                                                                                    >  1:283805/1‑146 (MQ=255)

                    ggATTCTGCCCTTGTATCCGATGATGAACGTGGCCAGACGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACATGACTGGCTCCTACAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGgtagta                                                                                                                                  <  2:689427/149‑1 (MQ=255)

                    ggATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGACCTGCGCTAGCGCAggccaga                                                                                                                                  <  2:961080/149‑6 (MQ=255)

                       ttCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACAt                                                                                                                               >  1:53107/1‑149 (MQ=255)

                        tCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACAtt                                                                                                                              <  1:62110/149‑1 (MQ=255)

                          aGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTta                                                                                                                            >  2:1278378/1‑149 (MQ=255)

                           gCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTtat                                                                                                                           >  1:1284745/1‑149 (MQ=255)

                                tGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGAACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTataaata                                                                                                                      >  1:932825/1‑149 (MQ=255)

                                    gCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAgg                                                                                                                  >  2:631675/1‑149 (MQ=255)

                                      cGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGt                                                                                                                <  1:433188/149‑1 (MQ=255)

                                      cGATGATGAAAGTGGCCAGCCGTTCAATCACCTCTGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTACTACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGt                                                                                                                <  1:1025072/149‑1 (MQ=255)

                                          gatgaACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACTCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGc                                                                                                            <  2:180469/149‑1 (MQ=255)

                                            tgaACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCgg                                                                                                          >  1:1253394/1‑149 (MQ=255)

                                              aaCGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCGGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGGGAGCgggg                                                                                                        <  1:552922/149‑1 (MQ=255)

                                              aaCGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCgggg                                                                                                        >  2:1094437/1‑149 (MQ=255)

                                                   ggCGAGCCGTTCAATCACCTCGGCGATGCACCGCGTCTGGTGTTATCTCAGGACTGGCTCCACCAACACCGTTACTTGGGCAACGCGGCTCTTCTGGCCTGCGGTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGtt                                                                                                   <  1:747015/149‑1 (MQ=255)

                                                   ggCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCCGGTGTTATCACAGGACTGGCTCCGCCAAAACAGTTTCTTGGGCAAAGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGtt                                                                                                   <  1:837405/149‑1 (MQ=255)

                                                   ggCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGtt                                                                                                   <  2:1418983/149‑1 (MQ=255)

                                                   ggCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGtt                                                                                                   <  2:13663/149‑1 (MQ=255)

                                                    gCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTg                                                                                                  >  2:492219/1‑149 (MQ=255)

                                                     ccAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGt                                                                                                 <  1:713547/149‑1 (MQ=255)

                                                       aGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCa                                                                                               >  1:1448756/1‑149 (MQ=255)

                                                        gCCGTTCAATCACGTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACTCCGTTACTTGGGCAACTCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCaa                                                                                              <  2:927732/149‑1 (MQ=255)

                                                        gCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATTAAGGGTGAGCGGGGCGGTTGTCaa                                                                                              <  1:34615/149‑1 (MQ=255)

                                                         ccGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACCCCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATATATGGTGAGCGGGGCGGTTGTCAAc                                                                                             >  1:1187211/1‑149 (MQ=255)

                                                          cGTTCAATCACCTCGGAGATCCACCCCCTCAGGTGATATCACAGGACTTGCTCCTCCAACACCCATACTTGCGCAACGCGCCTCTTCAGGCCTGCGCTAGCGCAGGTAGTACATAAATAAATAAAGAGTGAGCGCGGCGGTTGTCAAcc                                                                                            >  2:307545/1‑148 (MQ=255)

                                                              cAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATgg                                                                                        <  2:1197479/149‑1 (MQ=255)

                                                              cAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATgg                                                                                        <  1:375343/149‑1 (MQ=255)

                                                               aaTCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGATCGGGGCGGTTGTCAAAGATggg                                                                                       >  1:487026/1‑149 (MQ=255)

                                                                aTCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTCGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGAGGGGCGGTTGTCAACGATgggg                                                                                      >  1:201911/1‑149 (MQ=255)

                                                                 tCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCGACACCCTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACAGTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGt                                                                                     >  2:341352/1‑149 (MQ=255)

                                                                  cACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTCGTCAACGATGGGGTc                                                                                    <  1:808670/149‑1 (MQ=255)

                                                                    ccTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCAt                                                                                  <  2:59747/149‑1 (MQ=255)

                                                                     cTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGGAGTACATTTATAAATAAAGGGGGAGCGGGGCGGTTGTCCCCGATGGGGTCATg                                                                                 >  2:1478904/1‑149 (MQ=255)

                                                                     cTCGGCGATGCACCCCCTCAGGTGTTATCACACCACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCTGATGTCAACGATGGGGGCATg                                                                                 >  2:553827/1‑149 (MQ=255)

                                                                        ggCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCACCACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGCGCGGGGCGGTTGTCTACGATGGGGTCATGCgg                                                                              >  1:659598/1‑149 (MQ=255)

                                                                              gCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATACAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGAttttt                                                                        <  2:107739/149‑1 (MQ=255)

                                                                              gCACCCCCTCAGGGGCTCGCCCCGCACGGGCGCCTCCCACCCCGGACCGTGGGCACCGCGCCGCGTCTGGCCGGCGCTCGCGCAGGTAGTCCATTTCTCACTAACGGGGGAGCGGGGCGGTTGTCAACGATGGGGGCATGCGGAtgttt                                                                        <  1:502568/149‑1 (MQ=255)

                                                                               cACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTc                                                                       <  1:142310/149‑1 (MQ=255)

                                                                                aCCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCa                                                                      >  1:1232985/1‑149 (MQ=255)

                                                                                 cccccTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGCGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCAt                                                                     >  2:144411/1‑149 (MQ=255)

                                                                                 cccccTCAGGTGTTATCACAGGACTGGCTCCTCCAACACAGTTACATGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCAt                                                                     <  1:856716/149‑1 (MQ=255)

                                                                                        aGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTcc                                                              >  1:1306343/1‑149 (MQ=255)

                                                                                               aTCACAGGACTGGCACCTCCACAACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATTATTAAAGGGTGTGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGt                                                       <  2:375388/149‑1 (MQ=255)

                                                                                                  acaGGTCAGGCGCCTCCAATCCCGGTACTTGGGCACCGCGCCTCTTCGGGGCTGCGCTAGGGCAGGTTGGAGATTTATAAATAAAGCGTGCCCGTGGCGGTTGGCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTTGCGGTCag                                                    <  1:1003004/149‑1 (MQ=255)

                                                                                                  acaGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCag                                                    >  1:315456/1‑149 (MQ=255)

                                                                                                  acaGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGCCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCag                                                    >  2:471486/1‑149 (MQ=255)

                                                                                                    aGGACTGTCTCATCCAACACCTTTACTTGTGCAACTCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATACAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGTTTTTTCATCCACTCCTGGCGGTCagta                                                  <  2:895267/149‑1 (MQ=255)

                                                                                                       aCTGGCTACTCCAACACCGTTACATGGTCAACGCGCGTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGGGAGCGGGGCGGTTGTCAACGATGGTGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGtt                                               <  1:905431/149‑1 (MQ=255)

                                                                                                         tGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCa                                             >  1:1049124/1‑149 (MQ=255)

                                                                                                           gCTCCTCCCACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTTGGGCAGGTATTTCATTTATAAATAATGGGGGTGCGGGGCGGTTGTCAACGTTGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGc                                           <  1:68504/149‑1 (MQ=255)

                                                                                                           gCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGc                                           <  2:1252895/149‑1 (MQ=255)

                                                                                                           gCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCAAGCGCATGTAGTACAATTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGc                                           <  2:401670/149‑1 (MQ=255)

                                                                                                               ctccAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGt                                                       <  2:1329245/133‑1 (MQ=255)

                                                                                                               ctccAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCtaat                                       <  1:1131427/149‑1 (MQ=255)

                                                                                                                 ccAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCtaataa                                     <  2:1515349/149‑1 (MQ=255)

                                                                                                                  cAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATaaa                                    >  1:961954/1‑149 (MQ=255)

                                                                                                                  cAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATaaa                                    >  1:592349/1‑149 (MQ=255)

                                                                                                                   aaCTCCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAAt                                   <  2:454893/149‑1 (MQ=255)

                                                                                                                   aaCACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAAt                                   >  2:508798/1‑149 (MQ=255)

                                                                                                                   aaCACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGGGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATGCACTCCTGGCGGTCAGTAGTTCAGCTAATAAAt                                   <  2:665811/149‑1 (MQ=255)

                                                                                                                    acacCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATg                                  >  2:1115061/1‑149 (MQ=255)

                                                                                                                    acacCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATg                                  >  2:716123/1‑149 (MQ=255)

                                                                                                                    acacCGTTACTTGGGCAACGCGCCTCTTCTGGCCAGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATg                                  >  2:575821/1‑149 (MQ=255)

                                                                                                                        cGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTc                              <  2:1175279/149‑1 (MQ=255)

                                                                                                                         gTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATATATAAAGTGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGAGGTCAGTAGTTCAGCTAATAAATGCTTCa                             >  1:881894/1‑149 (MQ=255)

                                                                                                                              ttGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTgcg                        <  2:1232671/149‑1 (MQ=255)

                                                                                                                              ttGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTgcg                        >  1:177275/1‑149 (MQ=255)

                                                                                                                                gggCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCt                      >  1:408515/1‑149 (MQ=255)

                                                                                                                                gggCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAAAAAATGCTTCACTGCGCt                      >  1:223451/1‑149 (MQ=255)

                                                                                                                                   cAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAg                   <  1:1497799/149‑1 (MQ=255)

                                                                                                                                     aCGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGTGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAggg                 >  1:1364685/1‑149 (MQ=255)

                                                                                                                                      cgcgCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGt                <  2:220803/149‑1 (MQ=255)

                                                                                                                                       gcgcCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGtt               <  1:1100842/149‑1 (MQ=255)

                                                                                                                                        cgccgcTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGttt              <  1:1528149/149‑1 (MQ=255)

                                                                                                                                            tgttctGGCCTGCGCTTGTGGAGGTAGTACATTTATAAATAATGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTacac          <  2:1047710/147‑1 (MQ=255)

                                                                                                                                              ttctGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTc        >  2:790516/1‑149 (MQ=255)

                                                                                                                                              ttctGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTc        >  2:249315/1‑149 (MQ=255)

                                                                                                                                               tctGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCACTAAGGGTTTACACTCa       >  1:1403388/1‑149 (MQ=255)

                                                                                                                                                ctGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCaa      >  1:783212/1‑149 (MQ=255)

                                                                                                                                                   gCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCAGGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACAt   >  2:1304661/1‑149 (MQ=255)

GCTTCTGGTGACAACCCAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATT  >  NC_000913_3_hsa_pgi/4233370‑4233666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.