BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	4233518 =	1201 (12.850)	48 (0.580)	20/264	3.8	4.4%	intergenic (‑285/‑2416)	lysC/yjbE	lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
*	?	NC_000913_3_hsa_pgi	4233534 =	1027 (12.330)	48 (0.580)	20/264	3.8	4.4%	intergenic (‑301/‑2400)	lysC/yjbE	lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1035 total aligned reads displayed.

CAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAA  >  NC_000913_3_hsa_pgi/4233386‑4233682

cAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCCCCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCACCACCGTTACTTGGGCACCGCGCCTCTTCAGGCCTGCGCTAGCGCAGgt                                                                                                                                                      >  1:1282396/1‑149 (MQ=255)

 aGGGGCTTCAGCCCCTGTAGACGATGATGAACGTGGCCAGCCGTTCACTCACCTCGGCGATGCACCCCCTCATGGGTTATCACAGGCCTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGgta                                                                                                                                                     <  1:1023520/149‑1 (MQ=255)

  ggggATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGgtag                                                                                                                                                    >  1:468059/1‑149 (MQ=255)

      aTTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCGCCCCCTCAGGGGTAAACACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGAGCAGGTAGTACa                                                                                                                                                >  2:1261182/1‑149 (MQ=255)

       ttCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACAt                                                                                                                                               >  1:53107/1‑149 (MQ=255)

        tCAGCCCCTGTAGCCGATGCTGAACGTGGCCAGCCGTTCAATCAGCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACAtt                                                                                                                                              <  1:350884/149‑1 (MQ=255)

         cAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACAttt                                                                                                                                             <  1:727147/149‑1 (MQ=255)

          aGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTta                                                                                                                                            >  1:1356933/1‑149 (MQ=255)

          aGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTta                                                                                                                                            >  2:1234661/1‑149 (MQ=255)

            ccccTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCGTCCAACACCGTTACTTGGGCCACGCGCCTCGTCTGGCCTGCGCTAGCGCAGGTAGTACATTtata                                                                                                                                          >  2:503314/1‑149 (MQ=255)

            ccccTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGGAGTACAGTtata                                                                                                                                          >  1:1473429/1‑149 (MQ=255)

             cccTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCTCCTCGGCGATGCGCCCCCTCAGGTGTTATGACAGGACTGGCTGCTCGAACCGCGTTACTTGGGCAACGCGCCTCTTCGGGCCTGCGCTCGCGCAGGGAGGACATTTataa                                                                                                                                         >  2:1362246/1‑149 (MQ=255)

             cccTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTataa                                                                                                                                         >  1:1418983/1‑149 (MQ=255)

                tGTAGCCGATGATGAACGTGGCCTGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTACTGGCCTGCGCTAGCGCAGGAAGTACATTTataaata                                                                                                                                      >  1:834711/1‑149 (MQ=255)

                tGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTataaata                                                                                                                                      >  1:1252895/1‑149 (MQ=255)

                      cGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGt                                                                                                                                <  2:779108/149‑1 (MQ=255)

                        atgatgAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTAAGGTGTTATCACAGGACTGGCTCCTCCAACAACGTTACTTGGGAACCGCGCCTCTTCTGGCCTGCGCTCGCGCAGGAAGTACATTTATAATAAAAGGGGGa                                                                                                                              >  1:1154691/1‑149 (MQ=255)

                         tgatgaACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGATATCACAGGACTGGCTCCGCCAACACCGTTACTTGGGCACCGCGCCTCGTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAg                                                                                                                             >  1:1326477/1‑149 (MQ=255)

                          gatgaACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGACCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGc                                                                                                                            <  1:1065656/149‑1 (MQ=255)

                           atgaACGTGGCCCGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATATATAAAGGGTGTGCg                                                                                                                           >  1:375325/1‑149 (MQ=255)

                              aaCGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCgggg                                                                                                                        >  1:751133/1‑149 (MQ=255)

                                  tGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGt                                                                                                                    >  2:201757/1‑149 (MQ=255)

                                   ggCCATCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGTCTGGCTCCTCCAACACCGTTACTTGGGCCACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGtt                                                                                                                   <  2:1283064/149‑1 (MQ=255)

                                   ggCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTAGCACAGGACGGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGtt                                                                                                                   <  2:1184593/149‑1 (MQ=255)

                                    gCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCCACCCCGGTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTCGCGCAGGTAGTTCATTTATAAATATAGGGTGAGCGGGGCGGGTg                                                                                                                  >  1:298102/1‑149 (MQ=255)

                                      cAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTc                                                                                                                <  2:1147857/149‑1 (MQ=255)

                                       aGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCa                                                                                                               >  1:26134/1‑149 (MQ=255)

                                         ccGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAAc                                                                                                             >  1:881082/1‑149 (MQ=255)

                                         ccGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAAc                                                                                                             <  1:149708/149‑1 (MQ=255)

                                           gTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGa                                                                                                           <  2:1382926/149‑1 (MQ=255)

                                            ttCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGAt                                                                                                          <  2:964204/149‑1 (MQ=255)

                                              cAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATgg                                                                                                        >  1:323363/1‑149 (MQ=255)

                                               aaTCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATggg                                                                                                       >  1:220803/1‑149 (MQ=255)

                                               aaTCACCTCGGCGATGCACCCCCGCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATggg                                                                                                       <  1:1181337/149‑1 (MQ=255)

                                               aaTCACCTCGGCGAGGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTACAACACCGTTACTTGGGCAACGCGCATCTTCTGGCCTGCGCTATCTCAGGTAGTACATTTATAAAAAAAGGGTGAGCGGGGCGGTTGTCAACGATggg                                                                                                       <  2:258430/149‑1 (MQ=255)

                                                aTCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGTAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATgggg                                                                                                      >  2:1439734/1‑149 (MQ=255)

                                                      tCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGc                                                                                                <  1:1294262/149‑1 (MQ=255)

                                                      tCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGc                                                                                                <  2:231221/149‑1 (MQ=255)

                                                      tCGGCGATGAACCACCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGAAACGCGCCTCTTATGGCCTGGGCTAGCGCAGGTAGTACATTTATTAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGc                                                                                                <  1:509761/149‑1 (MQ=255)

                                                        ggCGATGCACCCCCTCAGGTGTTATCAAAGGACTGGCTCCTCCAACACCGTTACTTGCGCACCGCGCCTCTGCGGGCCTGCGCTAGCGCAGGTTGTTCATTTATAATTAAAGGGTGAGCGGCGCGGTTCTCAACGATGGGGTCATGCgg                                                                                              >  1:1128438/1‑149 (MQ=255)

                                                          cGATGCACACCGTCAGGTGTTATCACAGGTCTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGAt                                                                                            <  2:1117497/149‑1 (MQ=255)

                                                              gCACCCCCCCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGAttttt                                                                                        <  1:690276/149‑1 (MQ=255)

                                                               cACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTc                                                                                       <  2:54950/149‑1 (MQ=255)

                                                                aCCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCa                                                                                      >  1:1232985/1‑149 (MQ=255)

                                                                 cccccTCAGGTGTTATCACAGGACTGGCTCCTCCAACACAGTTACATGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCAt                                                                                     <  1:856716/149‑1 (MQ=255)

                                                                  ccccTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATc                                                                                    >  2:53009/1‑149 (MQ=255)

                                                                     cTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCAc                                                                                 >  2:655058/1‑149 (MQ=255)

                                                                     cTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCGAGCGCAGGTTGTACAGTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAAGGATGGGGTCGTGCGGATTTTTCATCCAc                                                                                 >  2:707284/1‑149 (MQ=255)

                                                                      tCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACt                                                                                >  2:615985/1‑149 (MQ=255)

                                                                        aGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTcc                                                                              <  2:573997/149‑1 (MQ=255)

                                                                         ggTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAAAGCGCATCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTTTAAAAAAAGGGTGCGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCAACTCCt                                                                             >  2:733775/1‑149 (MQ=255)

                                                                          gtgtTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTg                                                                            >  2:1205334/1‑149 (MQ=255)

                                                                           tgtTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTgg                                                                           <  1:769272/149‑1 (MQ=255)

                                                                            gtTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGc                                                                          <  2:419764/149‑1 (MQ=255)

                                                                             ttATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAATTAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCg                                                                         >  1:932321/1‑149 (MQ=255)

                                                                             ttATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCg                                                                         <  1:784185/149‑1 (MQ=255)

                                                                                tcacctgACTGGCGCCTCCAACACCGTTTCTTGGGCAACGCGCCTCTTGAGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGCGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTc                                                                      <  2:1517841/143‑1 (MQ=255)

                                                                                tCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTc                                                                      >  1:551274/1‑149 (MQ=255)

                                                                                tCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTc                                                                      >  1:1199191/1‑149 (MQ=255)

                                                                                 cacaGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCa                                                                     >  1:200051/1‑149 (MQ=255)

                                                                                 cacaGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGGGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCa                                                                     <  1:657733/149‑1 (MQ=255)

                                                                                  acaGGTCAGGCGCCTCCAATCCCGGTACTTGGGCACCGCGCCTCTTCGGGGCTGCGCTAGGGCAGGTTGGAGATTTATAAATAAAGCGTGCCCGTGGCGGTTGGCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTTGCGGTCag                                                                    <  1:1003004/149‑1 (MQ=255)

                                                                                  acaGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGCCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCag                                                                    >  2:471486/1‑149 (MQ=255)

                                                                                    aGGACTGTCTCATCCAACACCTTTACTTGTGCAACTCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATACAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGTTTTTTCATCCACTCCTGGCGGTCagta                                                                  <  2:895267/149‑1 (MQ=255)

                                                                                    aGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGTCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGAGCGGATGTCAACGATGGTATCATGCGCATTTTTCATCCACTCCTGGCGGTCagta                                                                  >  2:686425/1‑149 (MQ=255)

                                                                                    aGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGGCATGCGGATTTTTCATCCCATCCTGTCGGTCagta                                                                  >  1:413826/1‑149 (MQ=255)

                                                                                    aGGACTGGCTCCTCCAACACCGTAACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCagta                                                                  <  1:1399715/149‑1 (MQ=255)

                                                                                       aCTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCa                                                                     <  2:932026/143‑1 (MQ=255)

                                                                                        cTGGCTCCTCCAACTCCGTAACTTGGGGAACGCGCCTCTTCGGTCCTGCGCTAGCTCATGTATTACAATTATAAATAAAGGGTCAGCGGGCCGGTTGTCAACGATGGGGTCATGAGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTc                                                              <  2:1061413/149‑1 (MQ=255)

                                                                                         tGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCa                                                             <  2:1082491/149‑1 (MQ=255)

                                                                                           gCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGc                                                           <  1:492219/149‑1 (MQ=255)

                                                                                           gCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGc                                                           <  2:489814/149‑1 (MQ=255)

                                                                                             tcctccAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCa                                                                     >  2:873859/1‑137 (MQ=255)

                                                                                               ctccACCACCGTTACTTGGGCAACGCGCCTCTGCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATCGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCtaat                                                       >  2:353554/1‑149 (MQ=255)

                                                                                               ctccAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGt                                                                       <  2:1329245/133‑1 (MQ=255)

                                                                                                  cAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATaaa                                                    <  1:439945/149‑1 (MQ=255)

                                                                                                  cAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATaaa                                                    >  1:592349/1‑149 (MQ=255)

                                                                                                  cAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATaaa                                                    >  1:961954/1‑149 (MQ=255)

                                                                                                   aaCTCCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAAt                                                   <  2:454893/149‑1 (MQ=255)

                                                                                                   aaCACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCTGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAAt                                                   >  2:586903/1‑149 (MQ=255)

                                                                                                     cacCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGc                                                 <  1:620764/149‑1 (MQ=255)

                                                                                                     cacCGTTACTTGGGCAACGCGCCTCGTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGGGGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGc                                                 <  2:1473429/149‑1 (MQ=255)

                                                                                                      acCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCt                                                >  1:1445821/1‑149 (MQ=255)

                                                                                                      acCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCt                                                >  2:1027096/1‑149 (MQ=255)

                                                                                                          ttACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCAc                                            >  1:1520428/1‑149 (MQ=255)

                                                                                                          ttACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACAATTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCTGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTGAc                                            >  1:1045954/1‑149 (MQ=255)

                                                                                                          ttACTTGGGCAAAGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATATATAAAAAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGTCGGTCAGTAGTTCAGCAAATAAATGCTACaa                                            >  2:179608/1‑148 (MQ=255)

                                                                                                              ttGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTgcg                                        >  1:177275/1‑149 (MQ=255)

                                                                                                              ttGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTgcg                                        >  1:809332/1‑149 (MQ=255)

                                                                                                                gggCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCt                                      >  2:279914/1‑149 (MQ=255)

                                                                                                                  gCAACGCGCCTCGTCTGGCCTGCGCTAGCGCTGGTAGTACATTTATAAATAAAGGCTGAGCGGGGCGGTTGTCAACGATGGGGTCATCCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTaa                                    <  2:375755/149‑1 (MQ=255)

                                                                                                                     aCGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGGCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAggg                                 <  2:1418038/149‑1 (MQ=255)

                                                                                                                         gcCTCTTGTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGGGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATACACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAATGGTTTa                             <  1:1098406/149‑1 (MQ=255)

                                                                                                                          cgtcttcaGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGAGGATTTTTCATCCACTCCTGACGGTCAGAAGTTAAGCTAATTAATGCTTCACTGCGCTAAGGGTTTac                            >  2:316775/3‑149 (MQ=255)

                                                                                                                           ctctTCTGGCCTGCTCTAGCGCAGGTAGAACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTTGCGGGCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTacc                           >  2:843060/1‑148 (MQ=255)

                                                                                                                              ttctGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTc                        <  2:760683/149‑1 (MQ=255)

                                                                                                                                ctGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGTCGGTTGTCAACGATGGGGTCATGCTGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGTTTTACACTCaa                      <  2:109575/149‑1 (MQ=255)

                                                                                                                                ctGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCaa                      <  2:800166/149‑1 (MQ=255)

                                                                                                                                 aggCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCTCTGCGCTAAGGGTTTacacagaac                     >  1:903123/2‑144 (MQ=255)

                                                                                                                                   gCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCAGGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACAt                   >  2:1304661/1‑149 (MQ=255)

CAGGGGATTCAGCCCCTGTAGCCGATGATGAACGTGGCCAGCCGTTCAATCACCTCGGCGATGCACCCCCTCAGGTGTTATCACAGGACTGGCTCCTCCAACACCGTTACTTGGGCAACGCGCCTCTTCTGGCCTGCGCTAGCGCAGGTAGTACATTTATAAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAA  >  NC_000913_3_hsa_pgi/4233386‑4233682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.