New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 2470479148 (1.470)12 (0.130) 9/278 9.1 8.1% intergenic (+17/‑336) gtrS/tfaS serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage/pseudogene, CPS‑53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related
?NC_000913_3_hsa_pgi = 2470483 135 (1.430)intergenic (+21/‑332) gtrS/tfaS serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage/pseudogene, CPS‑53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 160 total aligned reads displayed.

TAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTGCAGACGATAACTTAAATG  >  NC_000913_3_hsa_pgi/2470336‑2470630
                                                                                                                                                   |                                                                                                                                                   
taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCAt                                                                                                                                                    <  2:116800/149‑1 (MQ=255)
 agagATTTAATCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATg                                                                                                                                                   <  1:1014199/149‑1 (MQ=255)
 agagATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATg                                                                                                                                                   >  2:1030525/1‑149 (MQ=255)
 agagATTTAAGCAAGCATATATTTGGAATGTATTTTTCGTTCGACATTAGCTTATACATAACAGTCGTTTTTTTAATTTAAAAAATAATACAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAAACATg                                                                                                                                                   >  2:126877/1‑149 (MQ=255)
   agaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgc                                                                                                                                                 <  2:1530398/149‑1 (MQ=255)
     aTTTAAGCAAGCATTTATTTGGAATGTATTATTCGTTCGCCGTTTGCTGATACATAACAGTCGTGTTATTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACAAAGGTTAAATTGCGCGCAAATCATGgcgc                                                                                                                                               >  2:1497929/1‑149 (MQ=255)
        tAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGca                                                                                                                                            <  2:52605/149‑1 (MQ=255)
         aagcaagcATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCATGATTGGCGCGcaa                                                                                                                                           <  2:760366/149‑2 (MQ=255)
         aagcaagcATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTATTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCATGATTGGCGCGcaa                                                                                                                                           <  2:710839/149‑2 (MQ=255)
          agcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                                          >  1:633295/1‑149 (MQ=255)
           gcaatcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACCGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCATGATTGGCGCGcaatt                                                                                                                                         <  1:1301288/149‑4 (MQ=255)
           gcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTTTAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGGACTAAGTTTAAATTGCGCTCCAATCATGGCGCGcaaca                                                                                                                                         >  2:1493982/1‑146 (MQ=255)
            caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGACGTTTTTTTAATTTATTAAATAATTCAAAGAAATCAATACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGAGCCAATCATGCCGAGCACAAg                                                                                                                                        >  2:353453/1‑149 (MQ=255)
             aatcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGc                                                                                                                                       <  1:16838/146‑1 (MQ=255)
             aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGc                                                                                                                                       >  2:594015/1‑149 (MQ=255)
               gcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCAATAAGTTTAAATTGCGCGCCAATAATGGCTCGCAAAAGCta                                                                                                                                     >  1:1131181/1‑149 (MQ=255)
                         ggAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAAc                                                                                                                           >  2:35407/1‑149 (MQ=255)
                              gTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAAt                                                                                                                      <  2:102252/149‑1 (MQ=255)
                                  ttttCGTTCGACCTTTGCTTATATATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtct                                                                                                                  <  2:214224/149‑1 (MQ=255)
                                  ttttCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtct                                                                                                                  <  1:1409744/149‑1 (MQ=255)
                                   tttCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtctc                                                                                                                 >  2:82208/1‑149 (MQ=255)
                                      cgttcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctc                                                                                                              <  2:92549/149‑1 (MQ=255)
                                       gttcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctcc                                                                                                             >  1:166001/1‑149 (MQ=255)
                                         tcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAATATATAATACCAACCTAATTTatcatccta                                                                                                           >  1:346116/1‑148 (MQ=255)
                                         tcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctcctc                                                                                                           <  1:710398/149‑1 (MQ=255)
                                           taCCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGAACTAATTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCtt                                                                                                         <  1:976624/148‑1 (MQ=255)
                                            aCCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAATTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGAGCCAATCATGGCGCGCACAAGCTATAATACAAACCTAATTTCTCCTCCTCTTa                                                                                                        >  1:50233/1‑149 (MQ=255)
                                            aCCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAATCTATAATACCAAACTAATTTCTCCTCCTCTTa                                                                                                        >  2:192158/1‑149 (MQ=255)
                                              cTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAACTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAATCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                                                                      <  2:809883/149‑1 (MQ=255)
                                               tttGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTagag                                                                                                     >  1:487885/1‑149 (MQ=255)
                                                ttGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                                                                                    <  1:117591/149‑1 (MQ=255)
                                                    ttATACATAACAGTCGTTTTTTTAATTTATAATATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACt                                                                                                <  1:39881/149‑1 (MQ=255)
                                                    ttATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAca                                                                                                >  1:554777/1‑148 (MQ=255)
                                                    ttATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACt                                                                                                <  1:1367469/149‑1 (MQ=255)
                                                    ttATACATAACAGTCGTTTTTTTAATTTATAAAATAAATCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCTCCAATAATGGCGCGCACAAGCTTTAATACAAACCTAATTTCACCTCCTCATATAGTGACt                                                                                                >  2:401734/1‑149 (MQ=255)
                                                       taCATAACAGTCGTTTTTTTAATTTATAATATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGTCGAGCACAAGATATAATACCAACCTAATTTATCCTCCTCTTAGAGTGACtata                                                                                             >  1:1223448/1‑149 (MQ=255)
                                                       taCATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACtata                                                                                             >  2:43738/1‑149 (MQ=255)
                                                        aCATAACTGTCGTTTTTTTAATTTATAAAAAAATTCAAACAAATCAAGACAATAGCGATGTAAATCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTatat                                                                                            <  2:823229/149‑1 (MQ=255)
                                                        aCATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTatat                                                                                            <  1:35407/149‑1 (MQ=255)
                                                         cATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATAtc                                                                                           >  2:1352974/1‑149 (MQ=255)
                                                            aaCAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                                                                        >  1:267951/1‑149 (MQ=255)
                                                            aaCAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                                                                        <  2:633295/149‑1 (MQ=255)
                                                             aCAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCt                                                                                       <  1:1567468/149‑1 (MQ=255)
                                                               aGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGa                                                                                     <  1:153871/149‑1 (MQ=255)
                                                               aGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGa                                                                                     >  2:740442/1‑149 (MQ=255)
                                                                gTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGAt                                                                                    >  1:1098934/1‑149 (MQ=255)
                                                                gTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGAt                                                                                    >  2:324621/1‑149 (MQ=255)
                                                                 tCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTACGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATACTACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                                                                                   <  2:176786/149‑1 (MQ=255)
                                                                 tCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                                                                                   >  2:23077/1‑149 (MQ=255)
                                                                 tCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                                                                                   <  1:436737/149‑1 (MQ=255)
                                                                 tCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                                                                                   <  2:469285/149‑1 (MQ=255)
                                                                   gTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCATTCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGa                                                                                 >  2:1143797/1‑149 (MQ=255)
                                                                   gTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGa                                                                                 >  1:469922/1‑149 (MQ=255)
                                                                   gTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGa                                                                                 >  1:1184241/1‑149 (MQ=255)
                                                                    tttttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGaa                                                                                >  1:1638259/1‑149 (MQ=255)
                                                                        tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGc                                                                            >  1:542534/1‑149 (MQ=255)
                                                                         ttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                                                                           <  2:487885/149‑1 (MQ=255)
                                                                            aTTTATAAAATAATTCAAAGAAATCAAGACAAGAGCGATGTAAAGCAATAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACAGAATTTCTCCACCTCGGAGAGTGACTAAATATCATGATAGAATTTCGTTa                                                                        >  2:1614597/1‑149 (MQ=255)
                                                                              ttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                                                                      <  1:1419471/149‑1 (MQ=255)
                                                                              ttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                                                                      <  2:1576035/149‑1 (MQ=255)
                                                                              ttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                                                                      <  2:1201248/149‑1 (MQ=255)
                                                                                 taAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTTACTATATCTCCTGATAGAATTGCGGTATTGAc                                                                   >  2:1311450/1‑149 (MQ=255)
                                                                                     ataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCAAGGCGAGCACAAGCTATAATACCAACCAAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTTACTAta                                                               >  2:1174312/1‑148 (MQ=255)
                                                                                        atTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCaaa                                                            <  1:611977/149‑1 (MQ=255)
                                                                                          tCAAAGAACTCAAGACACTAGCTATGTAAAGCACTAAGTTTAAATTGCGCGCCACTTATTTCGCGAACAAGCTATAATACCAACCTAAATTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATg                                                          <  2:967205/149‑1 (MQ=255)
                                                                                          tCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATg                                                          <  1:740442/149‑1 (MQ=255)
                                                                                           cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGc                                                         >  1:79857/1‑149 (MQ=255)
                                                                                            aaaGAAATCAAGACAATAGCGATGTAAAGCTCTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGCTAGAAGTGCGGGATTGACTATCAAATGcc                                                        >  2:1201259/1‑149 (MQ=255)
                                                                                            aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc                                                        <  2:1098934/149‑1 (MQ=255)
                                                                                             aaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGccc                                                       <  1:1030525/149‑1 (MQ=255)
                                                                                               gAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTg                                                     >  2:1457165/1‑149 (MQ=255)
                                                                                                aaaTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGa                                                    >  1:1225912/1‑149 (MQ=255)
                                                                                                aaaTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGa                                                    >  1:1349143/1‑149 (MQ=255)
                                                                                                      aGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCgtt                                              <  1:1648019/149‑1 (MQ=255)
                                                                                                         cAATAGCTATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGTCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATGTCCTGATAGAATTGCGGTATTTACTATCAAATGCCCTGATTCgttgtt                                           <  1:353453/149‑1 (MQ=255)
                                                                                                         cAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCGCCTCCTCTTAGAGTGACTATATCTCCTGATAGCATTGCGGTATTGACTATCAAATGGCCTGATTCgttgtt                                           >  2:918108/1‑149 (MQ=255)
                                                                                                             aGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTAtt                                       <  1:82208/149‑1 (MQ=255)
                                                                                                              gCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTg                                      <  1:216691/149‑1 (MQ=255)
                                                                                                               cGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCTTGGCGCGCACACGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGACCTGATTCGTTGTTTATTGt                                     >  1:134524/1‑149 (MQ=255)
                                                                                                               cGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGt                                     <  1:1493982/149‑1 (MQ=255)
                                                                                                                gATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTa                                    <  1:324621/149‑1 (MQ=255)
                                                                                                                 aTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTaa                                   <  1:1622530/149‑1 (MQ=255)
                                                                                                                  tGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAat                                  <  2:1131181/149‑1 (MQ=255)
                                                                                                                     aaaGCACTAAGTTTAAATTGCGCGCCAATCATGGTGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATAtc                               <  2:1355967/149‑1 (MQ=255)
                                                                                                                      aaGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATAtct                              >  2:69343/1‑149 (MQ=255)
                                                                                                                      aaGCACTAAGTTTAAATTGCGCGACAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGAGACTATATCTACTGATAGAATAGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTAATTGAAATAtct                              >  2:1182496/1‑149 (MQ=255)
                                                                                                                       aGCACTAATTTTAAAATGCGAGCCAATCATTGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTACTCTTAGAGTGACTATATCTCCTGATAGAATTGCTGTATTGACTATCAAATTCCCTGATTCGTTGTTTATTGTAATAtctc                             <  1:1569802/149‑1 (MQ=255)
                                                                                                                         cACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                                                                                 >  1:803518/1‑79 (MQ=255)
                                                                                                                              aGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATc                      <  1:733268/149‑1 (MQ=255)
                                                                                                                               gTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGTGTGACTATATCTCCTGATAGAATTGCGGTTTTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCt                     <  2:1108955/149‑1 (MQ=255)
                                                                                                                               gTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCt                     <  2:1079636/149‑1 (MQ=255)
                                                                                                                                tttAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTg                    >  1:95332/1‑149 (MQ=255)
                                                                                                                                  gcttgtGCGCGCCATGATTGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTGCa                  >  1:127101/6‑149 (MQ=255)
                                                                                                                                   aaaTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTGCAg                 >  2:1312629/1‑149 (MQ=255)
                                                                                                                                         cgcgcCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTGCAGACGATa           >  1:1493392/1‑149 (MQ=255)
                                                                                                                                         cgcgcCAATCATGGCGCGCACAAGCTATAATACCAACATAATTTCTCCTCCACGTAGCGTGACTATTTCTCGTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTAGTTGTTTATTGTAATATCTCCTCTATATGCAGACGATa           >  1:1264284/1‑149 (MQ=255)
                                                                                                                                              cAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGAGTATCAAATGCCCGGATTCGTTGTTTATTGTAATTTCTCCTCTATCTGCAGAAGAGAACTTa      >  1:1126798/1‑149 (MQ=255)
                                                                                                                                              cAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTGCAGACGATAACTTa      >  2:459250/1‑149 (MQ=255)
                                                                                                                                                aTCATGGCGCGCACAAGATATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTGCAGACGATAACTTaaa    <  1:1561997/149‑1 (MQ=255)
                                                                                                                                                  cATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTGCAGACGATAACTTAAATg  <  1:43738/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTCTATCTGCAGACGATAACTTAAATG  >  NC_000913_3_hsa_pgi/2470336‑2470630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.