New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 4218568 =193 (0.920)2071 (10.900) 155/152 -0.0 92.2% intergenic (+155/‑28) aceA/aceK isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase
?NC_000913_3_hsa_pgi = 4254058 NA (NA)noncoding (130/130 nt) RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 3230 total aligned reads displayed.

CTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTgccggatgcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_pgi/4218674‑4218568
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagaattGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAA  <  NC_000913_3_hsa_pgi/4254058‑4253947
                                                                                                                                                                                                                           
CTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCA                                                                                                                         <  2:152467/100‑1
    GAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAG                                                                                                                      >  2:5861169/1‑99
      GGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAAT                                                                                                                   >  1:2558515/1‑100
      GGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAAT                                                                                                                   <  2:2973193/100‑1
      GGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCATCATCAGGAGCAGAGAAT                                                                                                                   >  1:4630659/1‑100
        AATCGACCATACTGAGCATCGAAGCCTTGCAACATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTG                                                                                                                 >  1:876153/1‑100
        AATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTG                                                                                                                 >  1:4425769/1‑100
          TCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCC                                                                                                               <  2:5074058/100‑1
          TCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCC                                                                                                               <  2:3671998/100‑1
           CGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCG                                                                                                              >  1:5781595/1‑100
            GACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCG                                                                                                              <  2:2870290/99‑1
            GACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCG                                                                                                              <  1:4008793/99‑1
            GACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCG                                                                                                              <  1:143481/99‑1
            GACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCG                                                                                                              <  1:3406693/99‑1
             ACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGA                                                                                                            >  1:3635956/1‑100
                 TACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCG                                                                                                        >  2:1982767/1‑100
                   CTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGC                                                                                                      <  2:5157121/100‑1
                    TGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGC                                                                                                      >  2:1628449/1‑99
                     GAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGCGCAGAGAATTGCCGGATGCGGCG                                                                                                     >  2:5641238/1‑99
                      AGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGA                                                                                                    <  2:1015129/99‑1
                       GCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAA                                                                                                   >  2:3491112/1‑99
                         ATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAAC                                                                                                >  1:679719/1‑100
                          TCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACG                                                                                               <  1:3524505/100‑1
                            GAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGC                                                                                              <  1:1577617/99‑1
                              AGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTT                                                                                           <  2:770379/100‑1
                                 CTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATC                                                                                        >  1:3833525/1‑100
                                 CTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATC                                                                                        >  2:2089706/1‑100
                                 CTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGACTTATC                                                                                        >  2:2529006/1‑100
                                   TGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCG                                                                                      >  2:671417/1‑100
                                     CAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                                     <  2:1287447/99‑1
                                       AAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCT                                                                                  >  1:1769902/1‑100
                                       AAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCT                                                                                  <  2:3888736/100‑1
                                       AAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCT                                                                                  <  1:4738956/100‑1
                                          TGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCC                                                                               <  1:2962323/100‑1
                                          TGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCAGCGAAAACGCCTTATCCGGCCTTCC                                                                               <  2:3996921/100‑1
                                            GTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCAT                                                                             <  1:218929/100‑1
                                            GTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCA                                                                              >  1:4237503/1‑99
                                               TGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAAT                                                                          >  2:242137/1‑100
                                               TGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAAT                                                                          >  2:1125135/1‑100
                                                   CAATCAATAATTCCAGGCCACGCGACATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGa                                                                      <  2:5548793/100‑2
                                                       CAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAAT                                                                  >  1:4342818/1‑100
                                                       CAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATACGGCGAAAACGCCTTATCCGGCCTTCCATCATCTGCAAAT                                                                  >  2:5959735/1‑100
                                                        AATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                                                 >  1:2333962/1‑100
                                                        AATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                                                 >  1:2444663/1‑100
                                                        AATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                                                 >  1:1001485/1‑100
                                                        AATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                                                 >  2:4120113/1‑100
                                                        AATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                                                 >  1:2856739/1‑100
                                                         ATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTC                                                                <  1:275621/100‑1
                                                         ATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCC                                                                               <  2:1752375/85‑1
                                                           AATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAA                                                              >  2:3791615/1‑100
                                                           AATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAA                                                              >  1:528361/1‑100
                                                             TTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATA                                                            <  1:3940763/100‑1
                                                             TTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAAT                                                             >  2:4337027/1‑99
                                                                CAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCTTAATCTGCAAATTCAATAAAT                                                         >  2:4537684/1‑100
                                                                CAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAAT                                                         >  1:3070970/1‑100
                                                                CAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAAT                                                         <  1:4098851/100‑1
                                                                CAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAAT                                                         >  2:5448352/1‑100
                                                                  GGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTG                                                       >  1:2002615/1‑100
                                                                   GCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGC                                                      <  2:3276893/100‑1
                                                                   GCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGC                                                      <  2:4432990/100‑1
                                                                      ACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGAn                                                   <  2:5358612/100‑2
                                                                      ACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGAT                                                   <  2:1416100/100‑1
                                                                            CATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTG                                             <  1:5639083/100‑1
                                                                                TAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGT                                          <  2:3597940/99‑1
                                                                                  GCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGG                                       <  1:2632004/100‑1
                                                                                  GCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGG                                       <  1:795570/100‑1
                                                                                    GCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCC                                     <  1:2092988/100‑1
                                                                                      CCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTG                                   <  2:4226953/100‑1
                                                                                      CCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTG                                   <  1:3174670/100‑1
                                                                                      CCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTG                                   <  1:5163827/100‑1
                                                                                      CCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAAACTGCAAATTCAATAAATTGAGATGTGTTGTGTAGGCCTG                                   <  1:5519066/100‑1
                                                                                       nTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCT                                    >  1:4936721/2‑98
                                                                                       CTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGA                                  <  1:452991/100‑1
                                                                                         CATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAG                                 >  1:4848253/1‑99
                                                                                          ATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAGCGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGA                                <  1:5052303/99‑1
                                                                                          ATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAG                                 <  2:2212776/98‑1
                                                                                           TCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTT                                              >  1:1197324/1‑84
                                                                                            CAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGC                             >  2:3371653/1‑100
                                                                                            CAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTG                                             <  2:1196278/84‑1
                                                                                             AGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCGAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCG                            <  1:5856174/100‑1
                                                                                             AGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCG                            >  1:1100098/1‑100
                                                                                             AGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCG                            <  2:2634268/100‑1
                                                                                             AGGAGCAGACAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTTCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCG                            <  1:5965673/100‑1
                                                                                                AGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCG                         <  1:1877275/100‑1
                                                                                                  CAGANAATTGNCGGATGCNGCGAAAACGCCTTNTCCGGCCTTCCATAATCNGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCG                       <  2:4691910/100‑1
                                                                                                  CAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGTCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCG                         <  2:4923516/98‑1
                                                                                                  CAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGACTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCG                       >  2:5728195/1‑100
                                                                                                      GAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCAT                    >  1:1315254/1‑99
                                                                                                         TTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGG                <  2:27528/100‑1
                                                                                                         TTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGG                <  2:876625/100‑1
                                                                                                         TTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGG                <  1:3719333/100‑1
                                                                                                           GCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGC               <  2:2297770/99‑1
                                                                                                             CGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAAC            >  1:331615/1‑100
                                                                                                              GGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACC           <  2:5272283/100‑1
                                                                                                                   CGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGA       <  1:1687531/99‑1
                                                                                                                   CGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGA       <  2:3184593/99‑1
                                                                                                                   CGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAG        >  2:4803080/1‑98
                                                                                                                    GGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAA      <  2:3064372/99‑1
                                                                                                                     GCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGA    <  1:5397222/100‑1
                                                                                                                     GCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGC               <  2:1865624/89‑1
                                                                                                                                                                                                                           
CTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTgccggatgcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_pgi/4218674‑4218568
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagaattGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAA  <  NC_000913_3_hsa_pgi/4254058‑4253947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.