| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 4218568 = | 193 (0.920) | 2071 (10.900) | 155/152 | -0.0 | 92.2% | intergenic (+155/‑28) | aceA/aceK | isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase |
| ? | NC_000913_3_hsa_pgi | = 4254058 | NA (NA) | noncoding (130/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 2814 total aligned reads displayed.
AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCC > NC_000913_3_hsa_pgi/4218470‑4218668 | cctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggca > 1:1872401‑M1/99‑99 (MQ=255) ctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattctggaaggccggataaggcgttttcgccgcatccggcAAt < 1:2914908‑M1/3‑1 (MQ=255) ctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAAt < 1:2507132‑M1/3‑1 (MQ=255) aTCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAAt > 2:1971266/1‑100 (MQ=255) ngTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATtct > 1:2286156/2‑100 (MQ=255) atgcgtggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaatgccggataaggcgttttcgccgcatccggcAATtc > 2:5710211‑M1/95‑99 (MQ=255) atgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtc > 1:2715703‑M1/95‑99 (MQ=255) cgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTctct > 1:4340055‑M1/92‑99 (MQ=255) cggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCt > 1:5676899‑M1/90‑100 (MQ=255) cggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCt < 2:5340676‑M1/11‑1 (MQ=255) cgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCt > 1:5292938‑M1/87‑100 (MQ=255) gcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtg > 1:1315379‑M1/86‑100 (MQ=255) gcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCt < 2:2084681‑M1/14‑1 (MQ=255) ttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgat < 1:5789331‑M1/17‑1 (MQ=255) tctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgat < 1:1116863‑M1/17‑1 (MQ=255) ctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgatg > 1:5545069‑M1/82‑99 (MQ=255) ctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgatg > 1:3809646‑M1/82‑99 (MQ=255) ctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgat > 2:3163931‑M1/82‑98 (MQ=255) tcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAg < 2:1559221‑M1/20‑1 (MQ=255) caggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg < 2:1173544‑M1/21‑1 (MQ=255) caggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg < 1:5179923‑M1/21‑1 (MQ=255) caggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg < 2:679128‑M1/21‑1 (MQ=255) tGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAggg < 2:2941901/100‑1 (MQ=255) aggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAggg < 1:2810400‑M1/22‑1 (MQ=255) ggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtct < 2:2634822‑M1/6‑1 (MQ=255) ggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAggg < 2:1645336‑M1/22‑1 (MQ=255) ggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAg > 2:5621256‑M1/78‑97 (MQ=255) gcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgcg < 2:5145176‑M1/24‑1 (MQ=255) cctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgcgc < 1:5408240‑M1/25‑1 (MQ=255) acaacgcatcgcgagttattgaatttgcagattatggaaggccggataaggggttttcgccgcatccagcAATTGTCTGCTCCTGATGAGGGCGCTAAAt > 2:4591696‑M1/71‑100 (MQ=255) acaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAggg > 1:205699‑M1/71‑92 (MQ=255) caacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATg > 2:4172843‑M1/70‑100 (MQ=255) caacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATg < 2:4362953‑M1/31‑1 (MQ=255) caacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCGCCTGATGAGGGCGCTAAATg > 2:2301174‑M1/70‑100 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtga > 1:1197324‑M1/69‑84 (MQ=255) acacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGcc > 1:814575‑M1/68‑100 (MQ=255) cacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcg < 2:2751780‑M1/34‑1 (MQ=255) cgTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcgc < 2:3831115/100‑1 (MQ=255) catcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcgcg < 1:2604320‑M1/36‑1 (MQ=255) tcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGt < 2:3055581‑M1/37‑1 (MQ=255) cgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCt > 2:1340453‑M1/62‑75 (MQ=255) cgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTgg < 1:4518650‑M1/39‑1 (MQ=255) gcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGt < 2:3461324‑M1/37‑1 (MQ=255) gcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGc < 1:936338‑M1/40‑1 (MQ=255) atttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTg > 1:3466757‑M1/58‑100 (MQ=255) atttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTg > 1:4237798‑M1/58‑100 (MQ=255) tttattgaatttgcagattatggaaggccggataaggcgttttcgccggatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTgg > 2:4050338‑M1/57‑100 (MQ=255) tattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGa > 1:4602143‑M1/55‑99 (MQ=255) ttgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcgc > 2:4884014‑M1/53‑87 (MQ=255) tgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatta < 1:2161364‑M1/49‑1 (MQ=255) tgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatta < 1:1767713‑M1/49‑1 (MQ=255) tgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatta < 1:701026‑M1/49‑1 (MQ=255) tgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatta < 1:3683643‑M1/49‑1 (MQ=255) gaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat < 1:302136‑M1/50‑1 (MQ=255) gaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat < 2:4738275‑M1/50‑1 (MQ=255) gaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat < 2:772131‑M1/50‑1 (MQ=255) gaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatta > 2:2527022‑M1/51‑99 (MQ=255) aatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattatt > 1:1001485‑M1/50‑100 (MQ=255) aatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat > 1:3259053‑M1/50‑99 (MQ=255) atttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattg > 2:1865598‑M1/49‑100 (MQ=255) tgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgat > 1:3146251‑M1/46‑99 (MQ=255) gcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgatt > 2:5410679‑M1/45‑99 (MQ=255) gcagattatggaaggccggagaaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgattg < 2:5002942‑M1/56‑1 (MQ=255) cagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgattg < 2:35496‑M1/56‑1 (MQ=255) cagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGc > 2:3723267‑M1/44‑100 (MQ=255) agattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCt < 2:5842814‑M1/58‑1 (MQ=255) gattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTc > 1:5903305‑M1/42‑100 (MQ=255) ccGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTc < 1:1973139/99‑1 (MQ=255) tggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAAc < 2:4263254‑M1/63‑1 (MQ=255) ggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat < 2:1752375‑M1/50‑1 (MQ=255) gaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAt > 2:2863889‑M1/35‑100 (MQ=255) gaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAt < 2:596544‑M1/66‑1 (MQ=255) ccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGc > 2:449309‑M1/30‑100 (MQ=255) cTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGc < 1:4955528/100‑1 (MQ=255) cggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCa > 1:2410472‑M1/29‑100 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGc > 2:2408218/1‑98 (MQ=255) gataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAg > 2:1435728‑M1/27‑100 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGc < 2:3344900/100‑1 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGc > 1:3569317/1‑100 (MQ=255) aggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCtt < 2:2233490‑M1/78‑1 (MQ=255) ggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCGAGGCTTc < 2:1239319‑M1/79‑1 (MQ=255) ggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTc > 2:5253694‑M1/22‑100 (MQ=255) gcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTc < 1:1577617‑M1/79‑1 (MQ=255) cgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa < 1:1679343‑M1/81‑1 (MQ=255) tttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGc < 1:3371109‑M1/84‑1 (MQ=255) ttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGc > 2:3632938‑M1/16‑99 (MQ=255) ttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCt < 1:620930‑M1/85‑1 (MQ=255) cgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCt < 1:5074224‑M1/85‑1 (MQ=255) gccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTc > 2:5510183‑M1/13‑98 (MQ=255) gccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAg > 1:4867325‑M1/13‑100 (MQ=255) gccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAg < 1:390842‑M1/88‑1 (MQ=255) atccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATgg > 1:1422301‑M1/8‑100 (MQ=255) ccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTc < 1:4086397‑M1/95‑1 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTc < 2:1081610‑M1/95‑1 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTc < 1:4736115‑M1/95‑1 (MQ=255) gcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGt < 1:3991079‑M1/94‑1 (MQ=255) gcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGAt > 2:861084‑M1/3‑100 (MQ=255) cAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGAtt < 2:3927656‑M1/99‑1 (MQ=255) cAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGAtt > 2:3265627‑M1/2‑100 (MQ=255) cAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGAtt > 1:4425769‑M1/2‑100 (MQ=255) | AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCC > NC_000913_3_hsa_pgi/4218470‑4218668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |