New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 4240185 =NA (NA)20 (0.370) 14/264 3.4 NA noncoding (1/37 nt) REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913_3_hsa_pgi 4240218 = NA (NA)noncoding (34/37 nt) REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 694 total aligned reads displayed.

GCAAAATAAGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCA  >  NC_000913_3_hsa_pgi/4240037‑4240333
                                                                                                                                                     |                                                                                                                                                    
 caAAATACGGCTTCATTTTTACCCTCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGc                                                                                                                                                     <  2:489475/149‑1 (MQ=255)
 caAAATAAGGCTTCATTTTGACCGCCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGc                                                                                                                                                     <  1:102228/149‑1 (MQ=255)
    aaTAAGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCgg                                                                                                                                                  >  2:69157/1‑149 (MQ=255)
      tAAGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGAt                                                                                                                                                <  2:604533/149‑1 (MQ=255)
       aaGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGTTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATg                                                                                                                                               <  1:981313/149‑1 (MQ=255)
       aaGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATg                                                                                                                                               <  2:657066/149‑1 (MQ=255)
            ttCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGcgccg                                                                                                                                          >  1:139093/1‑149 (MQ=255)
            ttCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAA‑AATTTGCAGATGTGGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgcggcg                                                                                                                                          >  1:232996/1‑149 (MQ=255)
               aTTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCa                                                                                                                                       <  1:663753/149‑1 (MQ=255)
                tttttACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGCATGCGCCGCCAg                                                                                                                                      >  2:147464/1‑149 (MQ=255)
                tttttACCACCTCTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTGCGCGCATTGCTGGTGGCTGGGAATCCCCTGAATGGGT‑GATTTTTGAATTTCCGGCTTCGGTGCGGTTTGTCTTGCCTGATGCGCCGCCAg                                                                                                                                      <  2:233229/149‑1 (MQ=255)
                    tACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgcgc                                                                                                                                  <  1:358098/149‑1 (MQ=255)
                       caccTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGc                                                                                                                               >  2:351608/1‑149 (MQ=255)
                       caccTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTGTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAAGcgccgc                                                                                                                               >  2:288976/1‑149 (MQ=255)
                          cTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGGGGCTTa                                                                                                                            >  1:80080/1‑149 (MQ=255)
                          cTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTa                                                                                                                            >  2:798886/1‑149 (MQ=255)
                          cTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTa                                                                                                                            >  1:882067/1‑149 (MQ=255)
                           tttATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCttgt                                                                                                                           >  1:690315/1‑147 (MQ=255)
                               tCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCTCTCATTTCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGTCTGCGCCGCCAGGCGCGGCTTAGCCgg                                                                                                                       >  2:550420/1‑149 (MQ=255)
                               tCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGTTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCgg                                                                                                                       <  1:448711/149‑1 (MQ=255)
                               tCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCgg                                                                                                                       >  2:504336/1‑149 (MQ=255)
                                 aGGTTACGGTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                                                                     <  2:325329/149‑1 (MQ=255)
                                  ggTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGcgcg                                                                                                                                 >  1:677236/1‑136 (MQ=255)
                                   gTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTTGTTTTTTTTTTGTGGCTGGAAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCCCCTCCCCGCCCGCCTTATCCCGCCTa                                                                                                                   >  2:929331/1‑149 (MQ=255)
                                    ttACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTAc                                                                                                                  >  1:97097/1‑149 (MQ=255)
                                       cGTTTCATTTGTGCCAGAGGAACATTGTCGTTTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACggg                                                                                                               <  1:604960/149‑1 (MQ=255)
                                        gTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTTTTTTTTTTTTGGTGACTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCATGCCCGGCTTATACGGCCTATggtt                                                                                                              >  2:752928/1‑147 (MQ=255)
                                         ttgtgtttGTTCGAGAGGAATATTGTGGATTTTTCGCGCATTGCTGGTGGGTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggta                                                                                                             <  2:441442/144‑1 (MQ=255)
                                          ttCATTTGTTCCACAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                                                                            <  1:273943/149‑1 (MQ=255)
                                          ttCATGTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCAGGTGGCGGGGGATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                                                                            <  1:936733/149‑1 (MQ=255)
                                            cATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                                                                          <  1:404871/149‑1 (MQ=255)
                                                 gTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATc                                                                                                     <  1:573389/149‑1 (MQ=255)
                                                  ttCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATcc                                                                                                    >  2:27310/1‑149 (MQ=255)
                                                  ttCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATcc                                                                                                    <  2:710055/149‑1 (MQ=255)
                                                  ttCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCCTGCCGGATGTGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATcc                                                                                                    >  2:308054/1‑149 (MQ=255)
                                                     cAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                                                                          <  1:550450/140‑1 (MQ=255)
                                                      agagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAAGGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCt                                                                                                >  1:538405/1‑149 (MQ=255)
                                                          gAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                                                                            <  2:973286/149‑1 (MQ=255)
                                                           aaCATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCTCCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggt                                                                                           <  2:556830/149‑1 (MQ=255)
                                                           aaCATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggt                                                                                           <  2:126003/149‑1 (MQ=255)
                                                                    gATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgcgc                                                                                                                                            <  2:384145/91‑1 (MQ=255)
                                                                    gATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgcgc                                                                                                                                            >  1:384145/1‑91 (MQ=255)
                                                                     aTTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgcgc                                                                                 <  1:641384/149‑1 (MQ=255)
                                                                        tttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                                                                              <  2:741404/149‑1 (MQ=255)
                                                                           cgcgCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                                                                           <  1:779165/149‑1 (MQ=255)
                                                                           cgcgCATCGCTGGTGGCTGGGAATCCCCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                                                                           <  1:560095/149‑1 (MQ=255)
                                                                             cgcATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATc                                                                         >  2:467559/1‑149 (MQ=255)
                                                                                aTTGCTGGTTGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCTGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                                      >  1:33891/1‑149 (MQ=255)
                                                                                aTTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATCTCCGGGTTTGGTGGAGGCGCGCTCCAAATCCAg                                                                      <  1:496034/149‑1 (MQ=255)
                                                                                aTTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                                      <  2:949933/149‑1 (MQ=255)
                                                                                   gCTGGTGGCTGGGAATCACCTGGAGGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGGTTGTCTTGCCGGATGCGCCGGCAGGCGCGGCTTATCCGGGCTACGGGTAGGTATATCCGGGTTTGGTGGAGGCGCGCTCCAAATCCAGGtt                                                                   <  1:69907/149‑1 (MQ=255)
                                                                                   gCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGtt                                                                   <  2:202414/149‑1 (MQ=255)
                                                                                    cTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                                                                  >  1:518477/1‑149 (MQ=255)
                                                                                      ggtggCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa                                                                <  1:196290/149‑1 (MQ=255)
                                                                                      ggtggCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa                                                                <  2:185784/149‑1 (MQ=255)
                                                                                       gtggCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCCCGCTCCAAATCCAGGTTGTAc                                                               >  2:436332/1‑149 (MQ=255)
                                                                                        tggCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACa                                                              >  2:641691/1‑149 (MQ=255)
                                                                                         ggCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAAc                                                               <  2:573610/147‑1 (MQ=255)
                                                                                           cTGGGAATCACCTGAATGGGT‑GTTTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGGTGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGTGGCGCGGTCCAAATCCAGGTTGAACaaaa                                                           >  2:840583/1‑149 (MQ=255)
                                                                                            tGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAAc                                                          >  1:81882/1‑149 (MQ=255)
                                                                                            tGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCGCCAAATCCAGGTTGAACAAAAc                                                          >  1:108280/1‑149 (MQ=255)
                                                                                                 aTCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATaca                                                     <  2:589560/149‑1 (MQ=255)
                                                                                                     ccTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                                                                            <  2:873824/106‑1 (MQ=255)
                                                                                                      cTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCCTCAGTGGTAGCGGTCTCCAAAACCGGATCGGACAAAACATACACaaaa                                                >  2:105775/1‑149 (MQ=255)
                                                                                                       tGAATGGGT‑GATTTTTGAATTACCGGCTTTGGAGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACGTACACaaaaa                                               >  1:759527/1‑149 (MQ=255)
                                                                                                        gAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaa                                                           <  1:990118/136‑1 (MQ=255)
                                                                                                        gAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaa                                                           >  2:990118/1‑136 (MQ=255)
                                                                                                        gAACGGGT‑GATTTTTGAATTCCCGGCTTTGGTGCTGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGGGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaaaaaa                                              <  1:419926/149‑1 (MQ=255)
                                                                                                         aaTGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATAACCAAAAAat                                             >  1:908784/1‑149 (MQ=255)
                                                                                                           tGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAatat                                           >  1:16082/1‑149 (MQ=255)
                                                                                                              gT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                                                                                >  1:309490/1‑77 (MQ=255)
                                                                                                              gT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaaatcac                                                      >  1:624133/1‑130 (MQ=255)
                                                                                                              gT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaaatcac                                                      <  2:624133/135‑6 (MQ=255)
                                                                                                              gT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGa                                        >  2:8947/1‑149 (MQ=255)
                                                                                                              gT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGa                                        <  1:956583/149‑1 (MQ=255)
                                                                                                              gT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGa                                        >  1:319415/1‑149 (MQ=255)
                                                                                                                 gATTTTTCAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGGGCGCTTCAAATCCAGGTTGAACAAGACATACACAAAAAATATAGGtc                                      >  2:674491/1‑149 (MQ=255)
                                                                                                                   tttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATAAAAAtctc                                    >  1:25595/1‑149 (MQ=255)
                                                                                                                    ttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTCCGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTcc                                   >  2:416957/1‑149 (MQ=255)
                                                                                                                    ttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTcc                                   <  2:16082/149‑1 (MQ=255)
                                                                                                                    ttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTcc                                   <  1:298254/149‑1 (MQ=255)
                                                                                                                     tttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                                                                            >  1:853613/1‑75 (MQ=255)
                                                                                                                           ttACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTCTATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATGCACCAAAAATATAGATCTCCGTCACAt                            >  2:730427/1‑149 (MQ=255)
                                                                                                                             aCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGt                                 <  1:47095/142‑1 (MQ=255)
                                                                                                                               cGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGAtct                                     >  2:280791/1‑136 (MQ=255)
                                                                                                                               cGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGAtct                                     <  1:280791/136‑1 (MQ=255)
                                                                                                                               cGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACAttttt                        <  1:583558/149‑1 (MQ=255)
                                                                                                                               cGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACAttttt                        <  1:732188/149‑1 (MQ=255)
                                                                                                                                 gCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                                                                          >  2:25136/1‑65 (MQ=255)
                                                                                                                                         gCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACa              <  2:612341/149‑1 (MQ=255)
                                                                                                                                         gCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACa              <  2:816491/149‑1 (MQ=255)
                                                                                                                                          cGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACAttttt                        >  1:120772/1‑138 (MQ=255)
                                                                                                                                            gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGa           >  1:828044/1‑149 (MQ=255)
                                                                                                                                            gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGa           <  1:867587/149‑1 (MQ=255)
                                                                                                                                             tttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACa              >  2:525545/1‑145 (MQ=255)
                                                                                                                                               tGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGc        >  2:477027/1‑149 (MQ=255)
                                                                                                                                                gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCttt                                                                                              >  1:49126/1‑62 (MQ=255)
                                                                                                                                                 tCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCg                     <  2:771721/134‑1 (MQ=255)
                                                                                                                                                 tCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTc      >  1:203436/1‑149 (MQ=255)
                                                                                                                                                     gCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGTGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATATCCGGAACATTTTGACGTTATACAGGAAgaccccca  >  1:714414/1‑142 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GCAAAATAAGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGT‑GATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCA  >  NC_000913_3_hsa_pgi/4240037‑4240333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.