New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 4235606936 (13.930)47 (0.750) 34/262 1.0 5.0% intergenic (‑2373/‑328) lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
?NC_000913_3_hsa_pgi = 4235611 920 (14.640)intergenic (‑2378/‑323) lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1129 total aligned reads displayed.

GATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTA  >  NC_000913_3_hsa_pgi/4235457‑4235755
                                                                                                                                                     |                                                                                                                                                      
gATAAGGCGTTCACCCCGCATCCGGCAACCTATGCCTGATGCGACGCGGTCGCGTATTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGAC                                                                                                                                                        <  1:1018484‑M1/150‑1 (MQ=255)
 aTAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACg                                                                                                                                                       >  1:1177767/1‑150 (MQ=255)
    agacGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGCCGCAGGCGCGCCTTACAAGGCCGACAGGTCGATGCCCAGATGTACATCGTACTCGCCAATTAAGACATAGCCCGATTGATTCAATAACCTTAATAACAATGCCGACGTTa                                                                                                                                                    >  2:368552/4‑150 (MQ=255)
      gCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATg                                                                                                                                                  <  1:1036752‑M2/150‑2 (MQ=255)
         ttCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATgtcg                                                                                                                                               <  2:112079‑M2/150‑5 (MQ=255)
            aCGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATgtcggca                                                                                                                                            <  2:867676‑M2/150‑8 (MQ=255)
                      cGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATc                                                                                                                                  >  1:347939/1‑150 (MQ=255)
                       ggCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCa                                                                                                                                 >  1:695117/1‑150 (MQ=255)
                       ggCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCa                                                                                                                                 >  2:660599/1‑150 (MQ=255)
                         cAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGa                                                                                                                               <  1:837848/150‑1 (MQ=255)
                          aaCCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGAt                                                                                                                              >  1:413109/1‑150 (MQ=255)
                          aaCCGATGCCTGATGCCACGCGGACGCGTCTTATCAGGCCGACATGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGAt                                                                                                                              <  1:994792/150‑1 (MQ=255)
                           aCCGATGCCTGATGCGACGCGGTCTCGTCCTATCAGGCTTACAGGTTGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTTATTAAATACCCTTAATAACAATGCCGACGTTATGTCGGCATGTTTTTATCAGATa                                                                                                                             <  2:233362/150‑1 (MQ=255)
                            ccGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATaa                                                                                                                            >  1:9276/1‑150 (MQ=255)
                               aTGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTCATGTCGGCATTTTTTTATTAGATGAAtt                                                                                                                         >  1:475392/1‑149 (MQ=255)
                                tGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATcc                                                                                                                        >  2:211341/1‑150 (MQ=255)
                                ggCCTGATAAGACGCGACCGCGTCGCATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATcc                                                                                                                        >  1:675900/2‑150 (MQ=255)
                                 gCCTGATAAGACGCGACCGCGTCGCATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATccc                                                                                                                       >  1:394654/1‑150 (MQ=255)
                                    tGATGCGACGCGGTCGCGTCTTATCGGGACTACAGGCCGCTATTGATATCTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCtt                                                                                                                    <  1:523117/150‑1 (MQ=255)
                                    tGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACataacgtcggcattgttattaaggttat                                                                                                                            <  1:546567‑M1/142‑29 (MQ=255)
                                    tGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCtt                                                                                                                    >  1:436146/1‑150 (MQ=255)
                                      aTGCGACGCGAGCGGGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTACTAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGt                                                                                                                  <  2:350344/150‑1 (MQ=255)
                                          gACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATgtc                                                                                                                                                <  2:536437‑M2/116‑4 (MQ=255)
                                           aCGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAAAAACCTTAATAACAATGCCGAAGTTATATCGCCATTTTTTTATTAGAAAAATAACCCTGTCCG‑Ta                                                                                                            >  2:1095396/1‑150 (MQ=255)
                                             gcgGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAAt                                                                                                          >  1:15822/1‑150 (MQ=255)
                                                gTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTa                                                                                                       <  2:649783/150‑1 (MQ=255)
                                                 tgggcgcTTATGAGGGCTACAGGTCGAGGCCGATAGGTACATCGTATTCGGGAATTAATACACAGCGCGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTaa                                                                                                      <  2:1054964/144‑1 (MQ=255)
                                                 tCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTaa                                                                                                      <  1:629828/150‑1 (MQ=255)
                                                 tCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAACACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTaa                                                                                                      >  2:570667/1‑150 (MQ=255)
                                                   gcgTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACg                                                                                                    <  1:1125279/150‑1 (MQ=255)
                                                     gTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGa                                                                                                  >  1:1101849/1‑150 (MQ=255)
                                                      tCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGTCGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TTATTTTACGGaa                                                                                                 >  1:888494/1‑150 (MQ=255)
                                                        ttATCAGGCTTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCATAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAAt                                                                                               <  1:566393/150‑1 (MQ=255)
                                                           tCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATcccc                                                                                                                      >  2:386850/1‑125 (MQ=255)
                                                           tCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCAt                                                                                            >  2:680444/1‑150 (MQ=255)
                                                           tCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCAt                                                                                            >  1:379414/1‑150 (MQ=255)
                                                               gCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATAcag                                                                                        >  1:653656/1‑148 (MQ=255)
                                                               gCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAAAAATGCCGACataacgtcggcattgttattaa                                                                                                                                  >  2:51913‑M1/1‑87 (MQ=255)
                                                               gCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATCGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCg                                                                                        >  2:892551/1‑150 (MQ=255)
                                                                 cTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTg                                                                                      >  2:910102/1‑150 (MQ=255)
                                                                   aCAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCg                                                                                        >  2:715709/1‑146 (MQ=255)
                                                                     aGGTGGATGCCGATATGTACATCGTATTCTGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGt                                                                                  <  2:928256/150‑1 (MQ=255)
                                                                      ggTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAA‑AACTTGGTATGTTAATTTAACGGAAATCATACCGTGAGGtt                                                                                 <  1:881224/150‑1 (MQ=255)
                                                                        tCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATTCCCTTATCTT‑TAATTTTACGGAAATCATACCCAGCGGTTat                                                                               >  2:596983/1‑149 (MQ=255)
                                                                         cGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAAt                                                                              <  1:325113/150‑1 (MQ=255)
                                                                          ggagCCTATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATc                                                                             <  2:295302/147‑1 (MQ=255)
                                                                            tGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACataacgtcggca                                                                                                                                            <  1:858618‑M1/86‑13 (MQ=255)
                                                                               cGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTAt                                                                                                                                   <  2:261254/92‑1 (MQ=255)
                                                                               cGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTaaa                                                                        >  1:200329/1‑150 (MQ=255)
                                                                                gATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTaaaa                                                                       >  1:359489/1‑150 (MQ=255)
                                                                                gATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCCaaaa                                                                       >  1:710146/1‑150 (MQ=255)
                                                                                 atatGGACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAAt                                                                      <  2:468328/150‑1 (MQ=255)
                                                                                        cATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGAtttt                                                               <  1:795220/150‑1 (MQ=255)
                                                                                         aTCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGAttttt                                                              >  2:706402/1‑150 (MQ=255)
                                                                                          tCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTa                                                             >  1:72443/1‑150 (MQ=255)
                                                                                            gTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAAt                                                           >  1:279493/1‑150 (MQ=255)
                                                                                             tATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGAttt                                                                <  1:313964/144‑1 (MQ=255)
                                                                                               ttCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTc                                                                                                                 >  2:120298/1‑94 (MQ=255)
                                                                                                       ttAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTCTGTCGGCATTTTTTTATc                                                                                                                                  >  2:403807/1‑69 (MQ=255)
                                                                                                         aaTACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCTTCATTACATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTc                                              <  1:1159030/150‑1 (MQ=255)
                                                                                                          aTACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTc                                              >  1:240492/1‑149 (MQ=255)
                                                                                                          aTACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTACCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCg                                             <  1:1050117/150‑1 (MQ=255)
                                                                                                           tACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATc                                                                                                                                  <  2:325415/65‑1 (MQ=255)
                                                                                                               tAGCACGATTGATTAAATAACCTTACTAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACTGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTCTTTCGGatca                                        <  2:148070/150‑4 (MQ=255)
                                                                                                                aGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAg                                                                                    >  2:1076570/1‑105 (MQ=255)
                                                                                                                aGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAg                                                                                    <  1:1076570/105‑1 (MQ=255)
                                                                                                                  caagattgattAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATAc                                     <  1:811114/147‑1 (MQ=255)
                                                                                                                  cACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTaa                                                                               <  1:817769/108‑1 (MQ=255)
                                                                                                                    cGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCACTGTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGc                                   <  1:458804/150‑1 (MQ=255)
                                                                                                                     gattgattAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCa                                  >  2:495920/1‑150 (MQ=255)
                                                                                                                        tgatgaAATAACCTTATAAACAATGCCGACGTTATGTCGTCATTTTTTTATCATATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAACAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGAt                               <  2:551243/150‑1 (MQ=255)
                                                                                                                           ttAAATAACCTTAATAACAATGCCGACGTTATgtcggcattgttattaaggttatttaa                                                                                                                        >  1:980747‑M2/1‑32 (MQ=255)
                                                                                                                            tAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAAAACGCAGATTAAt                           >  1:182192/1‑150 (MQ=255)
                                                                                                                              aataatCTCAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTg                         <  1:217007/150‑1 (MQ=255)
                                                                                                                              aaTAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGAt                                                                                                                              <  1:1000742/50‑1 (MQ=255)
                                                                                                                                   ccTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCtttt                    <  1:913589/150‑1 (MQ=255)
                                                                                                                                    cTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTg                   >  2:854522/1‑150 (MQ=255)
                                                                                                                                    cTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTg                   >  1:603538/1‑150 (MQ=255)
                                                                                                                                      taataaCAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGtt                 >  1:253682/1‑150 (MQ=255)
                                                                                                                                       aataaCAATGCCGACGTTATGTCCGATTACGCTTAACAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAACATAGATTTTTAATCGTTTTTTATTCCGGAAAACACTCATATTCATAGCGTCTGtct                <  2:841655/150‑3 (MQ=255)
                                                                                                                                         taaCAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGttttt              <  2:974756/150‑1 (MQ=255)
                                                                                                                                          aaCAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCa                                  >  1:775084/1‑129 (MQ=255)
                                                                                                                                          aaCAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCtt                      >  2:812772/1‑141 (MQ=255)
                                                                                                                                          aaCAAAGCCGACGTTATGTCTGCATTTTTTTATAAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATGCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAAGACGTAGATTAAGTGCTTTTGTtttta             <  2:442435/150‑1 (MQ=255)
                                                                                                                                           aCAATGCCGACGTTATGTCGTCATTTTTTCATCAGATAAATCCCCTTGTCTG‑GAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTttttat            <  1:136305/150‑1 (MQ=255)
                                                                                                                                           aCAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATAcc                                                                                         >  2:761313/1‑73 (MQ=255)
                                                                                                                                           aCAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTttttat            <  1:509599/150‑1 (MQ=255)
                                                                                                                                            cAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTttttat            >  1:753448/1‑149 (MQ=255)
                                                                                                                                            aaaTGCCGACATAACGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAAt                                                           >  2:957666/2‑102 (MQ=255)
                                                                                                                                            aaaTGCCGACATAACGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAAt                                                           <  1:957666/101‑1 (MQ=255)
                                                                                                                                             aaTGCCGACataacgtcggcattgttattaaggttatttaatcaatcgtgctatgtattaattgccgaatacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggatgcggc           <  1:1108665‑M1/150‑142 (MQ=255)
                                                                                                                                             aaTGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTttttattt          >  1:300365/1‑150 (MQ=255)
                                                                                                                                                gCCGACGTTATGTCGGCAGTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCGTTTGTTTTTATTTTaa       <  2:1027449/150‑1 (MQ=255)
                                                                                                                                                 ccGACATAACGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCtt                      <  2:788022/134‑1 (MQ=255)
                                                                                                                                                  cGAGGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGt     <  2:623272/150‑1 (MQ=255)
                                                                                                                                                  cGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGt     <  1:495920/150‑1 (MQ=255)
                                                                                                                                                   gACataacgtcggcattgttattaaggttatttaatcaatcgtgctatgtattaattgccgaatacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtc                                       >  1:536437‑M1/1‑3 (MQ=255)
                                                                                                                                                   gACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGtt    <  1:591890/150‑1 (MQ=255)
                                                                                                                                                    aCataacgtcggaattgttcttaaggttatttaatcaatcgtgctatgtattaattgccgaatacgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgctacccaccgggcatcggctgcagagttcggcgtcaacc    >  2:189396‑M1/1‑2 (MQ=255)
                                                                                                                                                     cGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTa  <  2:1152503/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATTAAATAACCTTAATAACAATGCCGACGTTATGTCGGCATTTTTTTATCAGATAAATCCCCTTGTCTG‑TAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTA  >  NC_000913_3_hsa_pgi/4235457‑4235755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.