New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 1702145	70 (0.880)	5 (0.070)	5/258	10.1	6.9%	intergenic (+16/‑88)	malY/add	PLP‑dependent beta‑cystathionase and maltose regulon regulator/adenosine deaminase
	?	NC_000913_3_pae_pgi	= 1702153	70 (0.950)					intergenic (+24/‑80)	malY/add	PLP‑dependent beta‑cystathionase and maltose regulon regulator/adenosine deaminase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCGGGGTATACCTACGGTGAAGAAGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTCGTC  >  NC_000913_3_pae_pgi/1702010‑1702293                                                                                                                                        |                                                                                                                                                     ccGGGGTAGACCTACGGGGAAGAAGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTg                                                                                                                                         <  2:482462/149‑1 (MQ=255)        ataCCTACGGTGAAGAAGGTCGTGGTTTTGTTCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGTTGGATTATTTGGCGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATc                                                                                                                                  <  2:586679/149‑1 (MQ=255)         taCCTACGGTGAAGAAGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCg                                                                                                                                 >  2:1254983/1‑149 (MQ=255)            cTACGGTGAAGAAGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTgg                                                                                                                              >  1:928564/1‑149 (MQ=255)                 gTGAAGAAGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGAtttt                                                                                                                         >  1:309603/1‑149 (MQ=255)                   gaagaaGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGGAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCCATTGCGCAACGTAAAAAATAGTTGCGCAATCGTGGATTTTTa                                                                                                                       >  1:499559/1‑149 (MQ=255)                     agaagGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTGTTAcc                                                                                                                     >  1:1205499/1‑149 (MQ=255)                           tCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGtt                                                                                                                                          >  1:1167176/1‑122 (MQ=255)                           tCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGtt                                                                                                                                          <  2:1167176/122‑1 (MQ=255)                           tCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGGGGGTTTTTACCCTGCtt                                                                                                               >  1:377790/1‑149 (MQ=255)                               ggTTTTGTCCGGCTCAATGCCTGCGTGCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGtt                                                                                                           <  2:1062782/149‑1 (MQ=255)                                gTTTTGCCCGTCTCAATGCCGGCTGCCCACGCTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAACATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGttt                                                                                                          <  1:12464/149‑1 (MQ=255)                                 ttttGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGtttt                                                                                                         >  1:25504/1‑149 (MQ=255)                                     gTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTtata                                                                                                     >  1:1059183/1‑149 (MQ=255)                                       ccGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAAt                                                                                                   >  2:199152/1‑149 (MQ=255)                                        cGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAACAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATg                                                                                                  >  2:370157/1‑149 (MQ=255)                                         gtcctaaTGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGACGGATTAATTAACGTCATCCGCGCTGTTCGTTAACCCCAATTGCGGAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATgg                                                                                                 <  2:247705/144‑1 (MQ=255)                                          tctcAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGt                                                                                                <  1:544194/149‑1 (MQ=255)                                           ctcAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCAATCCGCGCCGTTCGTTAACCCCAATTGCCCAACGTAAACAATATTTTCGCCATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTg                                                                                               >  2:1348355/1‑149 (MQ=255)                                               aTGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCa                                                                                           >  2:1123270/1‑149 (MQ=255)                                                      cTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTtat                                                                                    <  1:370157/149‑1 (MQ=255)                                                      cTGCCCACGTGCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTtat                                                                                    <  2:223973/149‑1 (MQ=255)                                                          ccACGTTGTAAATTGGAAAAAGGTGTGGCTGGATTAATTACCGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATcc                                                                                <  2:1258940/149‑1 (MQ=255)                                                           cACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCCATTTTATATCCa                                                                               >  2:128256/1‑149 (MQ=255)                                                           cACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCa                                                                               >  1:757628/1‑149 (MQ=255)                                                            aCGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCAACATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAg                                                                              >  1:753385/1‑149 (MQ=255)                                                                 cGAAACTGGAAAAAGTTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACGCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGaaaaa                                                                         <  2:650644/149‑1 (MQ=255)                                                                   aaaCTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTTCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAaga                                                                       <  1:1254983/149‑1 (MQ=255)                                                                   aaaCTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAaga                                                                       <  2:428754/149‑1 (MQ=255)                                                                      cTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTg                                                                    <  2:1290222/149‑1 (MQ=255)                                                                         gAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGa                                                                 <  2:155443/149‑1 (MQ=255)                                                                          aaaaaGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTatat                                                                                  >  2:535687/1‑131 (MQ=255)                                                                          aaaaaGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTatat                                                                                  <  1:535687/131‑1 (MQ=255)                                                                           aaaaGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGATTGCGAcc                                                               >  2:336265/1‑149 (MQ=255)                                                                            aaaGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCa                                                              >  1:881694/1‑149 (MQ=255)                                                                                gtgtGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACTTAAAAAATCGTTGCGCACTCGTTGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCAtgat                                                          <  2:522601/149‑1 (MQ=255)                                                                                gtgtGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCAtgat                                                          <  1:199444/149‑1 (MQ=255)                                                                                    ggCCGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAAGTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCAtgattgat                                                      <  1:899912/149‑1 (MQ=255)                                                                                      cTGGACTCATTAACGCCATCCGCGCTGTTCGTTAACCCCCATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCAAGCAAAAGAAGGCGCCCATGATTGCTac                                                    >  2:1223216/1‑149 (MQ=255)                                                                                       tGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATacc                                                   >  1:1360470/1‑149 (MQ=255)                                                                                       tGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTCTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATacc                                                   >  2:293432/1‑149 (MQ=255)                                                                                         gATTAATTAACGCCATCCGCGCTGTTCGTTAACCCAGAATGCTCAACGTAAAAAATCGTTGCGCAATCGTGGATCTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAGAGGAGTGCGACCATGATTCATaacac                                                 >  2:369761/1‑149 (MQ=255)                                                                                            taattaaCGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCt                                              >  1:188879/1‑149 (MQ=255)                                                                                              attaaCGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTGGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATAACACCCTGc                                            >  1:277755/1‑149 (MQ=255)                                                                                               ttaaCGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGcc                                           >  2:597013/1‑149 (MQ=255)                                                                                                taaCGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCa                                          <  2:188879/149‑1 (MQ=255)                                                                                                  aCGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATTTCCAGAAAAAGAGTGCGACCATGATTGATACCACCCACCCAtt                                        >  2:88590/1‑149 (MQ=255)                                                                                                  aCGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCAtt                                        <  2:25504/149‑1 (MQ=255)                                                                                                   cGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTa                                       >  1:996805/1‑149 (MQ=255)                                                                                                   cGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTa                                       >  2:612829/1‑149 (MQ=255)                                                                                                    gacATACGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCCCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTaa                                      >  2:601799/3‑149 (MQ=255)                                                                                                    gCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATAAACAAAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTaa                                      <  2:1360038/149‑1 (MQ=255)                                                                                                    gCCATCCGCGCTGTTCGNTNCNCNCNATTGCGCAACGGAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTaa                                      <  1:933987/149‑1 (MQ=255)                                                                                                     ccATCCGCGCTGTTCGTTAACACAAATTGGGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCCCCCTGCCATTAAc                                     >  2:1014553/1‑149 (MQ=255)                                                                                                       agccGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTg                                   <  2:1211839/147‑1 (MQ=255)                                                                                                       aTCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAAc                                     >  2:624336/1‑147 (MQ=255)                                                                                                       aTCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAAc                                     <  1:624336/147‑1 (MQ=255)                                                                                                       aTCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTg                                   <  1:199152/149‑1 (MQ=255)                                                                                                            cgcTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGAGACCACCCTGCCATTAACTGATATc                              <  2:309603/149‑1 (MQ=255)                                                                                                                           ccAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGAt               <  1:779312/149‑1 (MQ=255)                                                                                                                             aaTTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATgg             >  1:1175700/1‑149 (MQ=255)                                                                                                                             aaTTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATgg             <  1:522256/149‑1 (MQ=255)                                                                                                                                    cAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACAtt      >  2:392147/1‑149 (MQ=255)                                                                                                                                     gaCGTAAGAAATCGTTGCGCAATGGTGGATTTTTACCCTGTTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTc     <  2:1205499/148‑1 (MQ=255)                                                                                                                                     aatgTAAAAAAGCGTTGCGCACTTGTGTATTTTTACCCTGTTTTGTATTTATAATGGTGCGCACTTTTAAATCAAGAAAAATAGTGCGATCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTc     <  2:97051/146‑1 (MQ=255)                                                                                                                                     aaCTTAAAAAATCGTTGCGCAATCGTGGATTTTGGCCTTAATTTGAAAAGGAATTGTTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTc     <  1:1029308/149‑1 (MQ=255)                                                                                                                                     aaCGTAAAAAATCTTTGCGCAATCGTTGATTTTTACCCTGCTTTGTTTATATGGTATTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTc     <  1:1318886/149‑1 (MQ=255)                                                                                                                                     aaCGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTc     >  2:33388/1‑149 (MQ=255)                                                                                                                                     aaCGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTc     <  1:597013/149‑1 (MQ=255)                                                                                                                                        gTAAACAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTCGTc  <  2:314847/149‑1 (MQ=255)                                                                                                                                        |                                                                                                                                                     CCGGGGTATACCTACGGTGAAGAAGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAACCCCAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATATCCAGAAAAAGAGTGCGACCATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTCGTC  >  NC_000913_3_pae_pgi/1702010‑1702293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.