| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | = 4433807 | 90 (1.630) | 4 (0.080) | 4/268 | 7.7 | 4.5% | noncoding (52/111 nt) | REP334 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP334 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913_3_pae_pgi | = 4433825 | NA (NA) | noncoding (70/111 nt) | REP334 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP334 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACG > NC_000913_3_pae_pgi/4433680‑4433973 | ttGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAgcatcgcatc > 2:750713/1‑149 (MQ=255) gACTGGATTGAGTTGAATTGGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGcc < 1:297102/149‑1 (MQ=255) cTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCgg > 2:167616/1‑149 (MQ=255) tGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCCATAAATGCCGGa > 1:4507/1‑149 (MQ=255) tGGATTGAGTTCAAGTAGCCCGAGGTGTTCGCGGTGCGGGGTGAACGTGAGGCATAACTGCCTGATGCGCTGAGCTTATCTGCTCGACGGTGCATGGCTTGTAGGGCGGATAAGGTGCGCCAGCCGCGCATACGCCAACAAATGCCGGa > 2:876665/1‑149 (MQ=255) gATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATg > 1:596816/1‑149 (MQ=255) aTTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGc > 2:596729/1‑149 (MQ=255) ttGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCg > 1:524516/1‑149 (MQ=255) ttGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCg < 1:358571/149‑1 (MQ=255) ttGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGAGGTTCAGTTATGCCAGCATCGCATCCGCCAATCAATGCCGGATGCGGTtga > 1:75056/1‑149 (MQ=255) taTTTGCCCGTGGTGTTGGCGGTGCGGTATGAACGTGCGGCATAATTGCCGGTTGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGTATAAGATGCGCCAGCATCGCATTCGCCAATAAATGCCGGATGCGGTtgatga < 2:286876/148‑1 (MQ=255) aTTTGCCCGAGGTTGTGGCGGTGCGGGATCAACGTGCGGCATAACTGCCGGATGTGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTgatgat < 1:834990/149‑1 (MQ=255) tttGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGAtt < 1:670967/149‑1 (MQ=255) cccGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGGTGATTtata > 1:881306/1‑149 (MQ=255) ccGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCga < 1:110835/135‑2 (MQ=255) ccGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCga > 2:110835/1‑134 (MQ=255) ccGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAg > 2:289479/1‑149 (MQ=255) gtgtTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGGGGAAAGCCAATCAGCCCACAGGGTCATGACTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGa > 1:476368/1‑149 (MQ=255) ttGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGGTGATTTATAGGCCGaaaa > 1:293968/1‑149 (MQ=255) ttGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGaaaa > 2:628932/1‑149 (MQ=255) cGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAaagaa < 1:696405/149‑1 (MQ=255) cGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAaagaa < 1:750713/149‑1 (MQ=255) gggATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGttt < 1:504590/149‑1 (MQ=255) ggATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTCGCGCGGAGAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGttt‑t > 1:431054/1‑149 (MQ=255) acgtcgggCATAACTGCCGGATGCGTTGAGCTTATCTGGTCTACGGTGCATGGCTTGGAGGGCGGATAAGATGCGCAAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTt‑tacttac < 2:293968/143‑1 (MQ=39) aCGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTt‑tacttac < 1:289479/149‑1 (MQ=255) aCGTGCGGAATAACTGCGGGATGCGCTGAGCGTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTt‑tacttac < 2:759569/149‑1 (MQ=255) gcagCATAACGGGCGGAGGCGCAGATCGTATCTGGTCAGCGAATAATTACTTGGAAGGCGGATAAGAGGCGGCAGCATCGCATTCGTCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCaa < 2:347393/146‑1 (MQ=255) gCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATc > 1:589642/1‑149 (MQ=255) aTAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCa > 1:398584/1‑149 (MQ=255) tcaCTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGGATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCAc < 1:440745/147‑1 (MQ=255) aaCTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCAcc > 1:736197/1‑149 (MQ=255) ccTGCCGGATGGGTTGAGCTTGTGTGGTCGACGGTGCTAGGCGTGTAGTGCACATAGGACGTGCAAGCAACGGATGCGGCAATGATTCCGTTATACTTTTGATGATTTATTGGGCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCt < 2:476368/148‑1 (MQ=255) tGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGa < 2:589642/149‑1 (MQ=255) gCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGAt > 1:886125/1‑149 (MQ=255) ggATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCTAATCCATCTGATaaa > 1:186718/1‑149 (MQ=255) ggATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATaaa > 1:48097/1‑149 (MQ=255) gATGCGCGGAGCTTAGCTGGTCTACGGTGCATGGCTTGTAGGGCGAATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCTACCTGATAAAt < 2:729297/149‑1 (MQ=255) aTGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATc < 2:48097/149‑1 (MQ=255) tGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCg < 1:167616/149‑1 (MQ=255) tGCGCTGAGCTTATCTGGTCTACGGTGCAGGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCg < 1:639155/149‑1 (MQ=255) gcTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATTGCaa > 2:493177/1‑149 (MQ=255) tGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGAtt < 1:709479/93‑1 (MQ=255) tGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGAtt > 2:709479/1‑93 (MQ=255) tGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGTTAAATCGCAAAc > 1:169980/1‑149 (MQ=255) cTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCGAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGa < 2:830308/149‑1 (MQ=255) cTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCCATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAGGAAGTGTTT‑TACTTACTCAACTCCACCTGATAACTCGCAAACCCGa > 2:221077/1‑149 (MQ=255) cTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGa < 2:431054/149‑1 (MQ=255) cTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGa > 1:252085/1‑149 (MQ=255) ttATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGt < 1:236764/80‑1 (MQ=255) ttATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGt > 2:236764/1‑80 (MQ=255) ttATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAAt < 2:595276/137‑1 (MQ=255) ttATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAAt > 1:595276/1‑137 (MQ=255) tCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATatc > 1:937512/1‑149 (MQ=255) tCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATatc > 2:42058/1‑149 (MQ=255) cTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATatca > 1:214165/1‑149 (MQ=255) tGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAAt < 2:530742/119‑1 (MQ=255) tGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAAt > 1:530742/1‑119 (MQ=255) gtgttagggTGCATGGCTTGCAGGGCGGATAAGATGCGCCAGAATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTGATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATatcatc < 2:824662/142‑1 (MQ=255) gTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGCAGTGTTT‑TACTTACTCAAATCCACCTGGTAAATCGCAAACCCGATGTCACCg > 1:279100/1‑149 (MQ=255) gTCTACGGGGCATGGCTAGTTTGCCGGATAAGATGGGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCg < 2:640313/149‑1 (MQ=255) tCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCgg > 1:931898/1‑149 (MQ=255) tACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTc > 2:598266/1‑149 (MQ=255) aCGGTGTATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGTATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTcg < 1:564122/149‑1 (MQ=255) gTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAGTGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTAATCAAATCCACCTGATAAATCGCAAACCCAATATCATCTGTCGCGa > 2:910196/1‑149 (MQ=255) gTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCAc > 2:211394/1‑114 (MQ=255) gTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCAc > 2:696590/1‑114 (MQ=255) gTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCAc < 1:696590/114‑1 (MQ=255) gTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCAc < 1:211394/114‑1 (MQ=255) tGCATGGCTTGTAGGGCGGATAAGATGCGCCCGCATCGATTGAGACCCTCGAAGTCTTTGACGGTAGAGGATTTATAGGACGCACAAGAA‑TGTTTGTACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGAc < 2:931898/149‑1 (MQ=255) tGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGGTAAATCGCAAACCCGATATCATCGGTCGCGAc > 1:398601/1‑149 (MQ=255) gCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCATCTTCAAAAGATATTCCGCTGCTGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACt < 1:910196/149‑1 (MQ=255) cATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACtt > 2:631264/1‑149 (MQ=255) gCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTAtt < 2:252085/149‑1 (MQ=255) tAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCg < 1:896630/149‑1 (MQ=255) ggCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATATGCCGAAAAAGAAGTGTTt‑tactt > 2:167891/1‑87 (MQ=255) ggCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATATGCCGAAAAAGAAGTGTTt‑tactt < 1:167891/87‑1 (MQ=255) ggCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCCTCGGTCGCGACTTTATTCATCGGAt > 2:954751/1‑149 (MQ=255) gCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATa > 1:110100/1‑149 (MQ=255) gggATAAGTTGCGCAAGCATCGCAGCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATAc < 1:297173/148‑1 (MQ=255) cGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATAc > 2:177552/1‑149 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTg > 1:297890/1‑149 (MQ=255) tAAGTTGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGcc < 1:628932/149‑1 (MQ=255) gATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCtt > 1:139934/1‑149 (MQ=255) cgaagatcgcatcCGCCAAGAAATGCCGGATGCTGTTGAGGAGTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCtt < 2:811614/144‑1 (MQ=255) tgctggcgcatcCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCttt < 2:381844/143‑1 (MQ=255) gcatcgcatcCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTtaa < 2:886125/149‑1 (MQ=255) gcatcgcatcCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCACTTtaa > 2:238350/1‑149 (MQ=255) atcgcatcCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATc > 2:559860/1‑125 (MQ=255) atcgcatcCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATc < 1:559860/125‑1 (MQ=255) ccgcatcCGGCATTTATTGGCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCAc < 1:659089/77‑1 (MQ=25) catcCGTCAAAAAAGTCTGGATGGGATTGATGATTTAGAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAGCTCGCAAACCCGATATCATCCGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACg < 1:876665/149‑1 (MQ=255) catcCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAGAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACg > 2:44430/1‑149 (MQ=255) | TTGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTT‑TACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACG > NC_000913_3_pae_pgi/4433680‑4433973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |