New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_vch_pgi	1671424 =	11 (0.600)	3 (0.170)	3/278	2.3	21.0%	coding (49/309 nt)	asr	acid shock‑inducible periplasmic protein
	?	NC_000913_3_vch_pgi	1671444 =	12 (0.680)					coding (69/309 nt)	asr	acid shock‑inducible periplasmic protein

TCGTAGTCTCTGCAGCAAAGGCGGCAG‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_vch_pgi/1671451‑1671424 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcag‑aGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATAAAAAACAGCATAAAGCAGCACCTGCCCAGAAAGCGCAGGCGGCTAAAAAGCA  >  NC_000913_3_vch_pgi/1671444‑1671563                                                                                                                                                       TCGTAGTCTCTGCAGCAAAGGCGGCAGAAGACTACGACCACACCTGCTCCGACTGCGACGGCCACCAAAGCAGCGCCGGCGAAAACAACACATCATAAAAAACAGCATAAAGCAGCACCTGCCCAGAAAGCGCAGAGGGCAAAAAAGCA  >  1:230203/1‑149       TCTCTGCAGCAAAGGCGGCAG‑AGACTACGACCACACCTGCTCCGACTGCGACGACCA                                                                                       >  1:197106/1‑57       TCTCTGCAGCAAAGGCGGCAG‑AGACTACGACCACACCTGCTCCGACTGCGACGACCA                                                                                       <  2:197106/57‑1                                                                                                                                                       TCGTAGTCTCTGCAGCAAAGGCGGCAG‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_vch_pgi/1671451‑1671424 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcag‑aGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATAAAAAACAGCATAAAGCAGCACCTGCCCAGAAAGCGCAGGCGGCTAAAAAGCA  >  NC_000913_3_vch_pgi/1671444‑1671563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.