New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 4093097127 (1.890)8 (0.120) 7/268 7.5 6.2% intergenic (‑274/+27) frvA/rhaM putative enzyme IIA component of PTS/L‑rhamnose mutarotase
?NC_000913_3_hsa_tpiA = 4093109 120 (1.860)intergenic (‑286/+15) frvA/rhaM putative enzyme IIA component of PTS/L‑rhamnose mutarotase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 129 total aligned reads displayed.

TTATTTAAATAAACCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCAGTGCTGGCAACCGCATTCCAGCGTTCTTC  >  NC_000913_3_hsa_tpiA/4092960‑4093258
                                                                                                                                                     |                                                                                                                                                     
 tATTTAAATAAACCACATGAAACATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTg                                                                                                                                                      <  2:14079/150‑1 (MQ=255)
  aTTTAAATAAACCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTgg                                                                                                                                                     >  1:1078736/1‑150 (MQ=255)
   tttAAATAAACCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGc                                                                                                                                                    >  1:391419/1‑150 (MQ=255)
   tttAAATAAACCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGc                                                                                                                                                    <  1:388828/150‑1 (MQ=255)
    ttAAATAAACCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGca                                                                                                                                                   >  2:342774/1‑150 (MQ=255)
       aataaaCCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACAt                                                                                                                                                <  1:108852/150‑1 (MQ=255)
        ataaaCCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACAtt                                                                                                                                               <  2:1078736/150‑1 (MQ=255)
        ataaaCCACACGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACAtt                                                                                                                                               <  2:265529/150‑1 (MQ=255)
          aaaCCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTgg                                                                                                                                             <  1:979975/150‑1 (MQ=255)
             ccACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATATATCCAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCa                                                                                                                                          <  1:823373/150‑1 (MQ=255)
              cacaTGAATCATTAATGGGTTATTCAATATTTATGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCaa                                                                                                                                         <  2:245148/150‑1 (MQ=255)
                caTGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAAtt                                                                                                                                       >  2:1022004/1‑150 (MQ=255)
                caTGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAAtt                                                                                                                                       >  1:891525/1‑150 (MQ=255)
                caTGAATCATTAATGGGTTATTCATTATTCTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAAtt                                                                                                                                       >  2:664952/1‑150 (MQ=255)
                  tGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTAc                                                                                                                                     <  1:1022004/150‑1 (MQ=255)
                    aaTCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACgg                                                                                                                                   <  2:589725/150‑1 (MQ=255)
                    aaTCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACgg                                                                                                                                   >  1:429495/1‑150 (MQ=255)
                     aTCATTAATGGGTTATTAAGTATTTTTGTGACTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGc                                                                                                                                  <  2:332188/150‑1 (MQ=255)
                      tCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGTAGGCATCTCTGGCACATTGGGCAATTACGGCa                                                                                                                                 >  1:621540/1‑150 (MQ=255)
                       cATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAg                                                                                                                                <  1:849357/150‑1 (MQ=255)
                       cATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAg                                                                                                                                <  1:946765/150‑1 (MQ=255)
                        aTTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAgg                                                                                                                               <  1:59914/150‑1 (MQ=255)
                        aTTAATGGGTTATTCATTATTCTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAgg                                                                                                                               <  1:664952/150‑1 (MQ=255)
                         ttAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGt                                                                                                                              <  2:779016/150‑1 (MQ=255)
                           aaTGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCATGTaa                                                                                                                            >  2:126525/1‑150 (MQ=255)
                             tGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTaaaa                                                                                                                          <  1:306168/150‑1 (MQ=255)
                             tGGGTCCTTCACTATGTTTGTGATTAAAGAAGAAAGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTaaaa                                                                                                                          <  2:891525/150‑1 (MQ=255)
                              gggTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAac                                                                                                                         >  1:498550/1‑150 (MQ=255)
                              gggTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAac                                                                                                                         >  1:498863/1‑150 (MQ=255)
                               ggTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACAtt                                                                                                                                               >  2:615731/1‑127 (MQ=255)
                               ggTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACAtt                                                                                                                                               <  1:615731/127‑1 (MQ=255)
                                 ttATTCATTATTTTTGTGATTTCCTCACAATGTATCAGGGAAATATGACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCAGAGACATCTCTGGCACATTGGGCCATTACGTCGGGTCAAACGct                                                                                                                      >  2:380409/1‑150 (MQ=255)
                                  tATTGATTAGGTTTGGGATTTACTAACAAGGTATCAGGGAAATATAAGTTGCCGGGAGACGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCCGGCACATTGGGCAATTACGGCAGGTAAAACActt                                                                                                                     <  2:262318/150‑1 (MQ=255)
                                    ttCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACActtct                                                                                                                   >  1:656780/1‑150 (MQ=255)
                                    ttCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACActtct                                                                                                                   <  2:790100/150‑1 (MQ=255)
                                    ttCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACActt                                                                                                                     <  1:1002233/148‑1 (MQ=255)
                                    ttCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACActt                                                                                                                     >  2:1002233/1‑148 (MQ=255)
                                    ttCATTATTTTTGTGATTTACTCACAATGTATCAAGGAAAGATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACActtct                                                                                                                   <  1:921705/150‑1 (MQ=255)
                                                 tgATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGc                                                                                                                                           >  2:1006562/1‑113 (MQ=255)
                                                 tgATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGc                                                                                                                                           <  1:1006562/113‑1 (MQ=255)
                                                   aTTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACAGTTCTTGCAGCTCACTtctc                                                                                                    >  1:37128/1‑150 (MQ=255)
                                                         tCATAATGTATGAGAGAAATATAACTTACCGGGAGATGTAAAATTTTTAATTTTTCAAATCGAAATTTCATATCTGGTGCCGGTTTTATCTCTGGCACAGTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCggg                                                                                              <  2:190341/150‑1 (MQ=255)
                                                         tCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCggg                                                                                              <  2:1039014/150‑1 (MQ=255)
                                                         tCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCCTGCAGCGCGCCTCTCACCggg                                                                                              >  2:648309/1‑150 (MQ=255)
                                                          cacaATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTAc                                                                                                                                     <  2:972944/110‑1 (MQ=255)
                                                          cacaATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGc                                                                                             >  1:965916/1‑150 (MQ=255)
                                                          cacaATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGc                                                                                             <  1:1036495/150‑1 (MQ=255)
                                                           acaATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTCCTCACCGGGCt                                                                                            >  1:512511/1‑150 (MQ=255)
                                                           acaATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCt                                                                                            >  1:715582/1‑150 (MQ=255)
                                                           acaATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCACTCCTCCCCGGCCt                                                                                            >  2:343296/1‑150 (MQ=255)
                                                                  aTCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATcc                                                                                     >  2:723045/1‑150 (MQ=255)
                                                                   tCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCg                                                                                    >  1:17738/1‑150 (MQ=255)
                                                                    cAGGGAAATATAACTTACCGTGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCgg                                                                                   <  2:163125/150‑1 (MQ=255)
                                                                    cAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCgg                                                                                   <  1:221217/150‑1 (MQ=255)
                                                                    cAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCgg                                                                                   <  1:342774/150‑1 (MQ=255)
                                                                    cAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCgg                                                                                   <  1:568514/150‑1 (MQ=255)
                                                                    aaGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCgg                                                                                   <  2:424371/149‑1 (MQ=255)
                                                                     aGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAaca                                                                                                                        >  1:562853/1‑112 (MQ=255)
                                                                     aGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAaca                                                                                                                        <  2:562853/112‑1 (MQ=255)
                                                                     aGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCggg                                                                                  <  2:868641/150‑1 (MQ=255)
                                                                     aGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCggg                                                                                  >  1:920881/1‑150 (MQ=255)
                                                                        gAAATATAAGTGACCGGGGTATGGAATATGTTTAATTTTTTAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTTTCGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTa                                                                               <  1:294256/150‑1 (MQ=255)
                                                                                  ttACCGGGATATGTAATATGTTGAAGTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATaa                                                                     <  2:161410/150‑1 (MQ=255)
                                                                                      cGGGAGATGTAATATGTTTAATTTTTCAAATGGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATc                                                                 >  1:174503/1‑150 (MQ=255)
                                                                                       ggggGATGTAATATGTTTAAGTTTGCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCg                                                                <  2:1152883/150‑1 (MQ=255)
                                                                                       gggAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCg                                                                <  2:660447/150‑1 (MQ=255)
                                                                                        ggAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTAc                                                                                                                                     <  1:785698/80‑1 (MQ=255)
                                                                                        ggAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTAc                                                                                                                                     >  2:785698/1‑80 (MQ=255)
                                                                                         gagaTGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGt                                                              <  1:1111050/150‑1 (MQ=255)
                                                                                            aTGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCat                                                           <  2:340779/150‑1 (MQ=255)
                                                                                             tGTAATATGTTTAATTGTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCata                                                          <  2:523675/150‑1 (MQ=255)
                                                                                              gTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGTGCTTTTATCCGGGTTACCGGGCATTACATCGGTCatat                                                         >  2:914365/1‑150 (MQ=255)
                                                                                              gTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCg                                                                <  2:1102388/143‑1 (MQ=255)
                                                                                              gTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCg                                                                >  1:1102388/1‑143 (MQ=255)
                                                                                                     gTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTcca                                                  <  1:943543/150‑1 (MQ=255)
                                                                                                     gTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTcca                                                  <  2:429495/150‑1 (MQ=255)
                                                                                                      tttAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTTACCGGGCTGTTATCCGGGTTAGCg                                                                            >  1:863586/1‑123 (MQ=255)
                                                                                                      tttAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTcccc                                                 >  1:1007814/1‑148 (MQ=255)
                                                                                                      tttAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTccac                                                 <  2:621540/150‑1 (MQ=255)
                                                                                                      tttAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTccac                                                 >  1:745862/1‑150 (MQ=255)
                                                                                                      tttAAGTCTTCAAATAGAGATCTAAATAATTGTGCCGGAGGCATCTCTGGCACATTGGGCAAGTACGGCAGCTAAAACACTTCTTGCAGCTCGCTACTCACCGGTCTGTTATCCGGGTTAGCGGGCATAACATCGGTCACATATTTccac                                                 <  1:1152742/150‑1 (MQ=255)
                                                                                                       ttAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAAGTACGGCAGGTGAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCTGGGGTAGCGGGCATAACATCGGTCATATATTTccacc                                                >  1:843677/1‑150 (MQ=255)
                                                                                                             tttGAAATCGAAATTGAAAATATTGTGCCGGAGGCATCTCTGGCACAGTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGtt                                          <  2:37128/150‑1 (MQ=255)
                                                                                                              ttCAAATCGAAATTTAAAATATTGTGCCGGAGGTATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTg                                         <  1:914365/150‑1 (MQ=255)
                                                                                                              ttCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCGGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTg                                         <  2:974330/150‑1 (MQ=255)
                                                                                                               tCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGc                                                                                                                                           <  2:551456/51‑1 (MQ=255)
                                                                                                               tCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGc                                                                                                                                           >  1:551456/1‑51 (MQ=255)
                                                                                                               tCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTgg                                        <  1:741357/150‑1 (MQ=255)
                                                                                                                 aaaTCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTcca                                                  >  1:371429/1‑138 (MQ=255)
                                                                                                                 aaaTCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTcca                                                  <  2:371429/138‑1 (MQ=255)
                                                                                                                      gAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACAt                                 >  1:1156156/1‑150 (MQ=255)
                                                                                                                        aaTTGAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGTCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCa                               <  2:967655/150‑1 (MQ=255)
                                                                                                                          tttAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCTGTTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCAGt                             <  2:493327/150‑1 (MQ=255)
                                                                                                                            tAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTGAAACACCTCTTACAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTGCCACCAACGTTGGCAAACATCAGtac                           >  1:1165515/1‑148 (MQ=255)
                                                                                                                              aaaTATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCAGTGCTg                         <  2:804912/150‑1 (MQ=255)
                                                                                                                                       cccGAAGGCATCGCTGTCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCATCCCGCTACTCACCGGGCTGTTAGCCGGGTTAGCGGTCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCAGTGCTGGCAACCGCa                <  2:1077057/149‑1 (MQ=255)
                                                                                                                                               cATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCa                                                            <  2:414782/98‑1 (MQ=255)
                                                                                                                                                aTCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCAGTGCTGGCAACCGCATTCCAGCGt       >  1:1073163/1‑150 (MQ=255)
                                                                                                                                                aTCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCAGTGCTGGCAACCGCATTCCAGCGt       >  1:114515/1‑150 (MQ=255)
                                                                                                                                                 tctcTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTCTCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCAGTACTGGCAACCGCATTCCAGCGtt      >  1:23758/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TTATTTAAATAAACCACATGAATCATTAATGGGTTATTCATTATTTTTGTGATTTACTCACAATGTATCAGGGAAATATAACTTACCGGGAGATGTAATATGTTTAATTTTTCAAATCGAAATTTAAAATATTGTGCCGGAGGCATCTCTGGCACATTGGGCAATTACGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACCGGGCTGTTATCCGGGTTAGCGGGCATAACATCGGTCATATATTTCCACCAACGTTGGCAAACATCAGTGCTGGCAACCGCATTCCAGCGTTCTTC  >  NC_000913_3_hsa_tpiA/4092960‑4093258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.