New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	2856425 =	NA (NA)	7 (0.110)	5/266	9.4	NA	intergenic (+9/+28)	fhlA/ygbA	formate hydrogenlyase transcriptional activator/uncharacterized protein
	?	NC_000913_3_hsa_tpiA	2856451 =	NA (NA)					intergenic (+35/+2)	fhlA/ygbA	formate hydrogenlyase transcriptional activator/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.

GTTGATTGTGCGCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCT  >  NC_000913_3_hsa_tpiA/2856278‑2856560                                                                                                                                                    |                                                                                                                                        gTTGATTGTGCGCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGGAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATGGGCATTGATTTAACTGCAGATTg                                                                                                                                        >  1:1049504/1‑149 (MQ=255)  ttGATTGTGCGCGTGCTGAAAGCAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATAAATCGGCTTGGAATTGATAAATCGGCCTTGATTGAACTGCAAAtttc                                                                                                                                       >  2:89484/1‑147 (MQ=255)  ttGATTGTGCGCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGc                                                                                                                                       <  1:1022248/149‑1 (MQ=255)    gATTGTGCGCGTGCTGAAAGAAACCAAGGGCGTGGTTGCCGGTCCTAAAGGCGCTGCGCAACGTCGGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCg                                                                                                                                     <  1:255577/149‑1 (MQ=255)    gATTGTGCGCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCg                                                                                                                                     <  2:1161627/149‑1 (MQ=255)     aTTGTGCGCGTGCTGAAAGAAACCAACTTCTTGGTAGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAAACGGCATTGATTTAACGTCAAGTGGCCgg                                                                                                                                    >  2:458649/1‑149 (MQ=255)             cggcgtGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCt                                                                                                                            <  2:55890/144‑1 (MQ=255)             cgagCTGAAAGAAACCAACGGCGGGGTCGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCt                                                                                                                            <  2:573031/146‑1 (MQ=255)             cgTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCt                                                                                                                            <  1:794564/149‑1 (MQ=255)               tGCTGAAGGAAACGAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGc                                                                                                                          <  2:352301/149‑1 (MQ=255)               tGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGc                                                                                                                          <  2:479911/149‑1 (MQ=255)               ggCTGAAAGCAACCAACGCCGTGGCTGCCGGGGCTAAAGGCGGTGTGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCGGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGc                                                                                                                          <  1:334436/148‑1 (MQ=255)                 cTGAACGCAACCCGCGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCt                                                                                                                        <  1:161011/149‑1 (MQ=255)                 cTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCt                                                                                                                        <  1:253227/149‑1 (MQ=255)                  tGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTg                                                                                                                       >  1:957040/1‑149 (MQ=255)                   gaaagaaaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGGATTAGTCTCAAATTGCCGGACAGATCTGCCTGt                                                                                                                      <  1:1230544/149‑1 (MQ=255)                                     ggTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGa                                                                                                    <  1:305600/149‑1 (MQ=255)                                     ggTTGCCGGGCCTAAAGGCACTGCGCAACGGCTGGGGCGGAAACGCACGACCCTGCTGTCACGGATGACACGCCTGGCAATTGGTTAAGCGCCAATGATGTAATGTCAAAGTGCAGGCCAAATCTGCCAGACACACATGCTATACATGa                                                                                                    >  2:452024/1‑149 (MQ=255)                                      gTTGCCGGGCCGAAAGGCGCTGCGCAACGTTTGGGGCGGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGTCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAg                                                                                                   <  2:971793/149‑1 (MQ=255)                                          ccGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCCTACTATTCATGCGGttt                                                                                               >  2:1057070/1‑149 (MQ=255)                                           cGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATATGCCTGTCCGGCATCCTACTCATGAAGtttt                                                                                              >  2:901435/1‑149 (MQ=255)                                           cGGGCCTAAAGGCGCTGCGCAACGGCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTACCTGTCCGGAATACTATTCATCAGGtttt                                                                                              >  2:901508/1‑149 (MQ=255)                                            gggCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCCTACTATTCTTGAGGttttt                                                                                             >  2:1034528/1‑149 (MQ=255)                                                cTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATCCTATTCATGAGGTTTTTTCgg                                                                                         >  1:504897/1‑149 (MQ=255)                                                                     tGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGACGTTTTTTCGGACGATATTTTTCCGGCAGTTc                                                                    >  2:517816/1‑149 (MQ=255)                                                                      ggggCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCt                                                                   <  1:938373/149‑1 (MQ=255)                                                                       gggCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATGTTTCCGACAGTTCTg                                                                  >  2:5096/1‑149 (MQ=255)                                                                        ggttGAAACGAACGACCCTGCTGGCACGGAGGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAAGTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTgg                                                                 <  2:356831/146‑1 (MQ=255)                                                                                cGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGAc                                                         <  1:199503/149‑1 (MQ=255)                                                                                   aCGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCt                                                      >  1:20837/1‑149 (MQ=255)                                                                                    cGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGAACCGGACGCtt                                                     <  2:1083670/149‑1 (MQ=255)                                                                                     gACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTCTTTTTTTTCTTTATTTTTCCGGCAGTTCTGGCACCGGACGCTTg                                                    <  1:613747/149‑1 (MQ=255)                                                                                             tgTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCgat                                            >  1:286795/1‑149 (MQ=255)                                                                                                 aCGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGAACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCgttgaga                                        >  1:354054/1‑149 (MQ=255)                                                                                                  cGGATGAAGCTGCTGGGAACTAACAAATCGGAATTGATTTTATTGCAAGTTGTCGGACCGATCGGCTGGTGGGGCGCACTATACATTAACCTGCTTCGGACCATATTTTTCCGGCAGTTCTGGTAGTGGACGCTTGTCAGCgatgagat                                       <  2:1149238/149‑1 (MQ=255)                                                                                                          gCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACg                               <  2:498366/149‑1 (MQ=255)                                                                                                              cTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTAtt                                                                                                         >  1:651600/1‑71 (MQ=255)                                                                                                              cTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTAtt                                                                                                         <  2:651600/71‑1 (MQ=255)                                                                                                               tGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATGTGCCTGTTCGGCATACTATTAATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTaa                          >  2:725265/1‑149 (MQ=255)                                                                                                                    aTTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCg                     <  2:1088915/149‑1 (MQ=255)                                                                                                                    aTTAATAAGTCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGCTGACGCACGGTTAAGATCg                     >  2:897757/1‑149 (MQ=255)                                                                                                                        aTAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATg                 >  1:1117012/1‑149 (MQ=255)                                                                                                                        aTAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATg                 >  1:1130288/1‑149 (MQ=255)                                                                                                                                gCATTGATTGAACTGCAAACTGCCGGACAGATCTGACTGTCCGGTATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCTATGAGATGACTCACGGTTAAGATCGGATGACGCcaca         <  2:862593/149‑1 (MQ=255)                                                                                                                                  aTTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGc       >  1:764951/1‑149 (MQ=255)                                                                                                                                     gATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGGTGACGCACGGTTAAGCTCGGCTGACGCCACCGCAtt    >  2:917809/1‑149 (MQ=255)                                                                                                                                       tttAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATtct  <  2:834149/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                        GTTGATTGTGCGCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCT  >  NC_000913_3_hsa_tpiA/2856278‑2856560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.