New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	2856425 =	NA (NA)	7 (0.110)	5/266	9.4	NA	intergenic (+9/+28)	fhlA/ygbA	formate hydrogenlyase transcriptional activator/uncharacterized protein
	?	NC_000913_3_hsa_tpiA	2856451 =	NA (NA)					intergenic (+35/+2)	fhlA/ygbA	formate hydrogenlyase transcriptional activator/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.

GGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAATCTGTTTCATCTCTTCAC  >  NC_000913_3_hsa_tpiA/2856314‑2856598                                                                                                                                          |                                                                                                                                                    ggTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGa                                                                                                                                          <  1:305600/149‑1 (MQ=255) ggTTGCCGGGCCTAAAGGCACTGCGCAACGGCTGGGGCGGAAACGCACGACCCTGCTGTCACGGATGACACGCCTGGCAATTGGTTAAGCGCCAATGATGTAATGTCAAAGTGCAGGCCAAATCTGCCAGACACACATGCTATACATGa                                                                                                                                          >  2:452024/1‑149 (MQ=255)  gTTGCCGGGCCGAAAGGCGCTGCGCAACGTTTGGGGCGGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGTCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAg                                                                                                                                         <  2:971793/149‑1 (MQ=255)      ccGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCCTACTATTCATGCGGttt                                                                                                                                     >  2:1057070/1‑149 (MQ=255)       cGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATATGCCTGTCCGGCATCCTACTCATGAAGtttt                                                                                                                                    >  2:901435/1‑149 (MQ=255)       cGGGCCTAAAGGCGCTGCGCAACGGCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTACCTGTCCGGAATACTATTCATCAGGtttt                                                                                                                                    >  2:901508/1‑149 (MQ=255)        gggCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCCTACTATTCTTGAGGttttt                                                                                                                                   >  2:1034528/1‑149 (MQ=255)            cTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATCCTATTCATGAGGTTTTTTCgg                                                                                                                               >  1:504897/1‑149 (MQ=255)                                 tGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGACGTTTTTTCGGACGATATTTTTCCGGCAGTTc                                                                                                          >  2:517816/1‑149 (MQ=255)                                  ggggCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCt                                                                                                         <  1:938373/149‑1 (MQ=255)                                   gggCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATGTTTCCGACAGTTCTg                                                                                                        >  2:5096/1‑149 (MQ=255)                                    ggttGAAACGAACGACCCTGCTGGCACGGAGGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAAGTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTgg                                                                                                       <  2:356831/146‑1 (MQ=255)                                            cGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGAc                                                                                               <  1:199503/149‑1 (MQ=255)                                               aCGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCt                                                                                            >  1:20837/1‑149 (MQ=255)                                                cGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGAACCGGACGCtt                                                                                           <  2:1083670/149‑1 (MQ=255)                                                 gACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTCTTTTTTTTCTTTATTTTTCCGGCAGTTCTGGCACCGGACGCTTg                                                                                          <  1:613747/149‑1 (MQ=255)                                                         tgTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCgat                                                                                  >  1:286795/1‑149 (MQ=255)                                                             aCGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGAACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCgttgaga                                                                              >  1:354054/1‑149 (MQ=255)                                                              cGGATGAAGCTGCTGGGAACTAACAAATCGGAATTGATTTTATTGCAAGTTGTCGGACCGATCGGCTGGTGGGGCGCACTATACATTAACCTGCTTCGGACCATATTTTTCCGGCAGTTCTGGTAGTGGACGCTTGTCAGCgatgagat                                                                             <  2:1149238/149‑1 (MQ=255)                                                                      gCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACg                                                                     <  2:498366/149‑1 (MQ=255)                                                                          cTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTAtt                                                                                                                                               >  1:651600/1‑71 (MQ=255)                                                                          cTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTAtt                                                                                                                                               <  2:651600/71‑1 (MQ=255)                                                                           tGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATGTGCCTGTTCGGCATACTATTAATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTaa                                                                >  2:725265/1‑149 (MQ=255)                                                                                aTTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCg                                                           <  2:1088915/149‑1 (MQ=255)                                                                                aTTAATAAGTCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGCTGACGCACGGTTAAGATCg                                                           >  2:897757/1‑149 (MQ=255)                                                                                    aTAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATg                                                       >  1:1117012/1‑149 (MQ=255)                                                                                    aTAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATg                                                       >  1:1130288/1‑149 (MQ=255)                                                                                            gCATTGATTGAACTGCAAACTGCCGGACAGATCTGACTGTCCGGTATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCTATGAGATGACTCACGGTTAAGATCGGATGACGCcaca                                               <  2:862593/149‑1 (MQ=255)                                                                                              aTTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGc                                             >  1:764951/1‑149 (MQ=255)                                                                                                 gATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGGTGACGCACGGTTAAGCTCGGCTGACGCCACCGCAtt                                          >  2:917809/1‑149 (MQ=255)                                                                                                   tttAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATtct                                        <  2:834149/149‑1 (MQ=255)                                                                                                                    ggACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCa                       >  1:1026786/1‑149 (MQ=255)                                                                                                                     gACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCAt                      >  1:1116422/1‑149 (MQ=255)                                                                                                                      accgATCTGCCTCTCCTGCATCCTATTCATGCCGTTCTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGAACGGTTAAGATCGGATGACGCAACAGCATTCTCGGCCCGGCCCAACGCATa                     <  1:89484/146‑1 (MQ=255)                                                                                                                            cTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAATCTGt               <  1:1238241/149‑1 (MQ=255)                                                                                                                             tGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAATCTGtt              <  2:1026786/149‑1 (MQ=255)                                                                                                                              gCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAATCTGttt             >  2:666018/1‑149 (MQ=255)                                                                                                                              atcggTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTCAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAATCTGttt             <  1:307046/145‑1 (MQ=255)                                                                                                                                cTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAATCTGTTTCa           <  2:957040/149‑1 (MQ=255)                                                                                                                                     cGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAATCTGTTTCATctct      >  1:1169326/1‑149 (MQ=255)                                                                                                                                      ggCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCACCGCATAATCTGTTTCATCCCtt     >  1:189154/1‑149 (MQ=255)                                                                                                                                         aTACTATGCAAGAGGTTTTTTCGGACGATATTTTTCGGGTAGTTCTGCCACCGGACGGTTGTCATCGATGCGATGACGCACGGTTAAGATCGTATCACGACCAAGCCTTATGGGCCCCGCGCAACGCATAATCTGTTTCAACTCTTCAc  >  2:838528/1‑149 (MQ=255)                                                                                                                                          |                                                                                                                                                    GGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAATCTGTTTCATCTCTTCAC  >  NC_000913_3_hsa_tpiA/2856314‑2856598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.