New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	127595 =	51 (0.710)	6 (0.090)	6/270	8.9	10.7%	intergenic (+8/‑317)	aceF/lpd	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2/dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2‑oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase
	?	NC_000913_3_hsa_tpiA	127615 =	52 (0.770)					intergenic (+28/‑297)	aceF/lpd	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2/dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2‑oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TAAAGAGTTCGTGCCGCGTCTGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAGG  >  NC_000913_3_hsa_tpiA/127452‑127743                                                                                                                                                |                                                                                                                                                     tAAAGAGTTCGTGCCGCGTCTGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCgg                                                                                                                                                 >  1:447025/1‑149 (MQ=255)       gTTCGTGCCGCGTCTGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAAc                                                                                                                                           >  1:163587/1‑149 (MQ=255)         tCGTGCCGCGTCTGATGCCGCCTATTTCTCTCTCCTTCGACCACCGCGGGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAAcgg                                                                                                                                         <  1:346920/149‑1 (MQ=255)             gCCGCGTCTGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAAcggccgg                                                                                                                                     >  1:88651/1‑149 (MQ=255)                   tCTGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGCCCCAACGCCCGGCttttt                                                                                                                               >  2:339969/1‑149 (MQ=255)                     tGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTc                                                                                                                             <  1:485662/149‑1 (MQ=255)                      gATGCTGCCGATTTCTCTCGCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCt                                                                                                                            <  1:399521/149‑1 (MQ=255)                       acgctgcCGCTTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTg                                                                                                                           <  2:622864/147‑1 (MQ=255)                           tgcCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACCCGCTGTCTGACATTCGCCGTCTGCTGGGGTAAGTAAAAGAGCCGGCACCACGACCGGCTTTTTTCTGGtca                                                                                                                       >  1:1137452/1‑147 (MQ=255)                           tgcCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTGCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATTTAAGTAAAAGAGCCGGCCCAACGGACGGCTTTTTTCTGGTaa                                                                                                                       >  1:526025/1‑149 (MQ=255)                              cGATTTCTCTCTCCTTCGACCACAGCGTGATCGACGGTGCTGAAGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTGGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCGGGCTTTTTTCTGGTAAtct                                                                                                                    >  1:45264/1‑149 (MQ=255)                                     tctctcCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATCCGCCGTCTGGTGATGTAAGTACAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCCCATGAAt                                                                                                             >  2:594239/1‑149 (MQ=255)                                          ccTTCGACCGCCGCTTGCTCGCACGTGCTCATGCTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAATAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTAtt                                                                                                        <  1:186229/149‑1 (MQ=255)                                           cTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGGATGTATTg                                                                                                       >  1:1127703/1‑149 (MQ=255)                                           cTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTg                                                                                                       <  2:147270/149‑1 (MQ=255)                                            ttCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGa                                                                                                      >  2:646173/1‑149 (MQ=255)                                                   accGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGttatt                                                                                               >  1:625452/1‑149 (MQ=255)                                                    ccGCGTGATCGACGTTGCTTACGGTGCCCGTTTCATTACCATCATTAACAACCCGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGttatta                                                                                              <  1:939833/149‑1 (MQ=255)                                                     cgcgTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAg                                                                                             >  1:988377/1‑149 (MQ=255)                                                     cgcgTGATCCACGGTGCCGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAg                                                                                             <  2:170069/149‑1 (MQ=255)                                                        gTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGa                                                                                          <  1:46837/149‑1 (MQ=255)                                                         tggtCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGaa                                                                                         <  1:110005/146‑1 (MQ=255)                                                         tGATCGACGGTGCTGCTGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGaa                                                                                         <  1:71109/149‑1 (MQ=255)                                                                              cccGTTTCATTACCATCATTAACAACACGCAGTCTGACATTCGCCGTTTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGttt                                                                    <  1:480583/149‑1 (MQ=255)                                                                               ccGTTTCATTACCATCATTAACAACACGCTGTCTGGCATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAAACAAATAGGTTGACATttg                                                                   >  2:816527/1‑149 (MQ=255)                                                                               ccGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTttg                                                                   >  2:844291/1‑149 (MQ=255)                                                                                 ggttCATTACCCTCACTAACAACACGCTGTCTGACATGCGCCGTCTTGTGATGGAAGGAAAAGAGCCGGCCCAACGGCCGGCTTTTTCCTGGTAATCGCATGAATTTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTttgtt                                                                 <  2:712073/147‑1 (MQ=255)                                                                                  tttCATTACCATCATTAATAGCACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTGAGGTAATCTCATTAATCTATAGCGGATATTAGCGAATAGACAAATCGGTTGCtgtttgttt                                                                >  2:983615/1‑148 (MQ=255)                                                                                          ccATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTaaaaa                                                        >  2:915629/1‑149 (MQ=255)                                                                                            atcatTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTACAAAtt                                                      >  1:326764/1‑149 (MQ=255)                                                                                            atcatTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAAtt                                                      <  1:716288/149‑1 (MQ=255)                                                                                                   acaacaCGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTCAAAATTGTTAACa                                               >  1:901065/1‑149 (MQ=255)                                                                                                    caacaCGCTGTCTGACATTCGCCGTCTTGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACaa                                              <  1:961419/149‑1 (MQ=255)                                                                                                    caacaCGCTGTCTGACATTCGCCGTCTCGTGATGTAAGTCAAAGAGCCATCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGGGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAACTTGTTAACaa                                              >  1:178894/1‑149 (MQ=255)                                                                                                     aacaCGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGttatt                                                                                               >  1:1053048/1‑99 (MQ=255)                                                                                                     aacaCGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGttatt                                                                                               <  2:1053048/99‑1 (MQ=255)                                                                                                      acacGCTTTCTGACAGTCGCCGTCTGGTGATTTAAGTGAAAGCGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAAtt                                            <  1:629786/149‑1 (MQ=255)                                                                                                        acGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAAtttt                                          <  2:901750/149‑1 (MQ=255)                                                                                                            tGTCTGACATTCGCCGTCTGGGGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAAtttttaaa                                      <  1:1192904/149‑5 (MQ=255)                                                                                                              tCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATCGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTaaaa                                    <  1:979944/149‑1 (MQ=255)                                                                                                                tGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTttgtt                                                                 <  1:1107153/118‑1 (MQ=255)                                                                                                                tGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTttgtt                                                                 >  2:1107153/1‑118 (MQ=255)                                                                                                                tGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATa                                  >  2:480679/1‑149 (MQ=255)                                                                                                                 gACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATAc                                 <  2:163587/149‑1 (MQ=255)                                                                                                                         ccGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCAACGGAt                         >  1:115869/1‑149 (MQ=255)                                                                                                                             tttgTGATGGAAGGAAAAGGCGCGGCCGGACTGGCGGCTTTTTTCGGGTAATCTTATGAATGTATTGAGGTTAGTAGCGAATAGACAAATTGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGaa                     <  2:200054/146‑1 (MQ=255)                                                                                                                                 tGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCCTGAATTTGTTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGAc                 >  1:668143/1‑149 (MQ=255)                                                                                                                                      taagtaaAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGACCCggt            >  2:491025/1‑149 (MQ=255)                                                                                                                                          taaAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGACCCggtggtg        <  2:447025/149‑1 (MQ=255)                                                                                                                                          taaAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGACCCggtggtg        <  1:915629/149‑1 (MQ=255)                                                                                                                                              agagCCGGCCCAACGGTCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTa    >  2:150944/1‑149 (MQ=255)                                                                                                                                                agCCGGCCCAAGGGCCGGCGTTTTCCTGGGAATGTGATGAATGTATTGAGGTTATGAGGGAATAGGCAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTGACAATTTTGTAAAATACCGACGGATGGAACGACCCGGTGGTGGGTAgg  <  2:42195/149‑1 (MQ=255)                                                                                                                                                agCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTCTTGGGGTTAATATCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAgg  <  1:662883/149‑1 (MQ=255)                                                                                                                                                agCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAgg  >  2:235349/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                     TAAAGAGTTCGTGCCGCGTCTGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAAGTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTATTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAGG  >  NC_000913_3_hsa_tpiA/127452‑127743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.