New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 2300133	23 (0.810)	4 (0.150)	4/260	3.3	15.6%	coding (128/696 nt)	napG	ferredoxin‑type protein
	?	NC_000913_3_hsa_tpiA	= 2300140	22 (0.830)					coding (121/696 nt)	napG	ferredoxin‑type protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAAATATGGCGTGCCCGCCGACAGACCAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTAC  >  NC_000913_3_hsa_tpiA/2299985‑2300270                                                                                                                                                     |                                                                                                                                          aaaaTATGGCGTGCCCGCCGACAGACCAGAGGCCAGCGTAGAGAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGc                                                                                                                                           >  1:72200/1‑149 (MQ=255)        ggCGTGCCCGCCGACAGACCAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTGTATGGCTCCGGGCGGGCGCAACCGCACGcgcatctg                                                                                                                                    <  1:86948/149‑8 (MQ=255)                     aCAGACCACAGGCCAGCGACGGCCGTGTTAAGGGGTTGTAAGGGCAAGCCTGAACACACTGCCCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGc                                                                                                                       <  2:247993/149‑1 (MQ=255)                      cAGACCAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAAATGCACGTACGGGTTGCt                                                                                                                      >  2:177721/1‑149 (MQ=255)                           cAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACAGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAGCCGCACGCCAGATGCGCGTGCGGTTTGCtgttgt                                                                                                                 >  1:329388/1‑149 (MQ=255)                                   aGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGAt                                                                                                                                      >  2:97756/1‑120 (MQ=255)                                   aGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGAt                                                                                                                                      <  1:97756/120‑1 (MQ=255)                                      gTCGCCAGTTTTAAGGTGCCGCAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCACCCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgcgc                                                                                                      <  1:148512/149‑1 (MQ=255)                                          ccAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCGGCGCcaca                                                                                                  >  1:51128/1‑149 (MQ=255)                                              ttttAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCt                                                                                                                      >  2:167207/1‑125 (MQ=255)                                              ttttAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCt                                                                                                                      <  1:167207/125‑1 (MQ=255)                                                        tCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagccag                                                                                    <  2:403411/149‑1 (MQ=255)                                                              gggCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGcc                                                                              <  2:72200/149‑1 (MQ=255)                                                               ggCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCct                                                                             >  2:272164/1‑149 (MQ=255)                                                                 cAAGCCTGAACACATCGACCCGAACGCACACAGGCACTGGCAAAGTCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCCGACCCCCGATTCCCTTGCGGTTCGTCGGTGTCACCTCATCGCCACACCCACGGCAGCCAGCCCGCctgc                                                                           <  2:255373/149‑1 (MQ=255)                                                                          acacacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGTCCGCCTGCTGTGCGAAc                                                                  <  1:100384/149‑1 (MQ=255)                                                                                      cAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAg                                                      >  1:32633/1‑149 (MQ=255)                                                                                                  gCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAgcggcggcg                                          <  1:338857/149‑1 (MQ=255)                                                                                                     cTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGGTGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCCCGGCGGCGAGCCTGCCTGCTGTGCGAACGACATCGGGCGGAAAGCGGCGGCGAcc                                       >  2:53203/1‑149 (MQ=255)                                                                                                             ggCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTATAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAg                               <  1:52205/149‑1 (MQ=255)                                                                                                              gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCACCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGCCCCTTTTGCgg                              >  2:385320/1‑149 (MQ=255)                                                                                                                   ctcGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGTTGTTGTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCg                         >  1:269389/1‑149 (MQ=255)                                                                                                                                  gggcgggcTCAAGCGCGCGCCAGATGCGCGGGCGGTGTGCTGTTGCAACCCCTGCGCCACACCCACGGCAGCGAGCCCGCCTGCTGTGCGAACGAGTTCGCGCATAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATaa          <  2:335431/149‑1 (MQ=255)                                                                                                                                         cgcAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGATTa   <  2:350088/149‑1 (MQ=255)                                                                                                                                          ggaaCCGCACGCCAGATGCGCGTGGGGGTTTGTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTTCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGTCCGGGACATAATGGCTTac  <  2:237581/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                          AAAATATGGCGTGCCCGCCGACAGACCAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTAC  >  NC_000913_3_hsa_tpiA/2299985‑2300270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.