New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 230013323 (0.810)4 (0.150) 4/260 3.3 15.6% coding (128/696 nt) napG ferredoxin‑type protein
?NC_000913_3_hsa_tpiA = 2300140 22 (0.830)coding (121/696 nt) napG ferredoxin‑type protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACAGACCAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGT  >  NC_000913_3_hsa_tpiA/2300005‑2300282
                                                                                                                                       |                                                                                                                                              
aCAGACCACAGGCCAGCGACGGCCGTGTTAAGGGGTTGTAAGGGCAAGCCTGAACACACTGCCCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGc                                                                                                                                   <  2:247993/149‑1 (MQ=255)
 cAGACCAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAAATGCACGTACGGGTTGCt                                                                                                                                  >  2:177721/1‑149 (MQ=255)
      cAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACAGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAGCCGCACGCCAGATGCGCGTGCGGTTTGCtgttgt                                                                                                                             >  1:329388/1‑149 (MQ=255)
                 gTCGCCAGTTTTAAGGTGCCGCAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCACCCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgcgc                                                                                                                  <  1:148512/149‑1 (MQ=255)
                     ccAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCGGCGCcaca                                                                                                              >  1:51128/1‑149 (MQ=255)
                         ttttAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCt                                                                                                                                  <  1:167207/125‑1 (MQ=255)
                         ttttAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCt                                                                                                                                  >  2:167207/1‑125 (MQ=255)
                                   tCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagccag                                                                                                <  2:403411/149‑1 (MQ=255)
                                         gggCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGcc                                                                                          <  2:72200/149‑1 (MQ=255)
                                          ggCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCct                                                                                         >  2:272164/1‑149 (MQ=255)
                                            cAAGCCTGAACACATCGACCCGAACGCACACAGGCACTGGCAAAGTCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCCGACCCCCGATTCCCTTGCGGTTCGTCGGTGTCACCTCATCGCCACACCCACGGCAGCCAGCCCGCctgc                                                                                       <  2:255373/149‑1 (MQ=255)
                                                     acacacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGTCCGCCTGCTGTGCGAAc                                                                              <  1:100384/149‑1 (MQ=255)
                                                                 cAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAg                                                                  >  1:32633/1‑149 (MQ=255)
                                                                             gCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAgcggcggcg                                                      <  1:338857/149‑1 (MQ=255)
                                                                                cTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGGTGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCCCGGCGGCGAGCCTGCCTGCTGTGCGAACGACATCGGGCGGAAAGCGGCGGCGAcc                                                   >  2:53203/1‑149 (MQ=255)
                                                                                        ggCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTATAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAg                                           <  1:52205/149‑1 (MQ=255)
                                                                                         gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCACCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGCCCCTTTTGCgg                                          >  2:385320/1‑149 (MQ=255)
                                                                                              ctcGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGTTGTTGTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCg                                     >  1:269389/1‑149 (MQ=255)
                                                                                                             gggcgggcTCAAGCGCGCGCCAGATGCGCGGGCGGTGTGCTGTTGCAACCCCTGCGCCACACCCACGGCAGCGAGCCCGCCTGCTGTGCGAACGAGTTCGCGCATAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATaa                      <  2:335431/149‑1 (MQ=255)
                                                                                                                    cgcAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGATTa               <  2:350088/149‑1 (MQ=255)
                                                                                                                     ggaaCCGCACGCCAGATGCGCGTGGGGGTTTGTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTTCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGTCCGGGACATAATGGCTTac              <  2:237581/147‑1 (MQ=255)
                                                                                                                                 cAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGt  >  2:249494/1‑149 (MQ=255)
                                                                                                                                       |                                                                                                                                              
ACAGACCAGAGGCCAGCGTCGCCAGTTTTAAGGTGTCGTAAGGGCAAGCCTGAACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAGAAAGCGGCGGCGACCATTTTGAGGTTTCGCTGACCGGGACATAATGGCTTACACCTTCTCCAGT  >  NC_000913_3_hsa_tpiA/2300005‑2300282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.