New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 2806992	46 (0.960)	5 (0.110)	5/284	6.1	10.4%	coding (983/1065 nt)	proW	glycine betaine/proline ABC transporter permease
	?	NC_000913_3_hsa_tpiA	= 2807013	40 (0.840)					coding (1004/1065 nt)	proW	glycine betaine/proline ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTGGTCATCGCCTCGATGATTGCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACA  >  NC_000913_3_hsa_tpiA/2806844‑2807139                                                                                                                                                     |                                                                                                                                                    gtggtCATCGCTGCGATGATTGCCGTCGGCGGCTTGGGGCAGATGGTCCTTCGCGGTATCGGTCGGCTGGATATTGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTgg                                                                                                                                                     <  1:83575/149‑1 (MQ=255)    gtCATCGCCTCGATGATTGCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGgcg                                                                                                                                                  >  2:500461/1‑149 (MQ=255)            accGAAGATTGCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCAc                                                                                                                                          <  1:668383/147‑1 (MQ=255)              cGATGATGGCCGTCGTCGGGTTGGGTGAGAGGGTCCTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGc                                                                                                                                        <  1:3274/149‑1 (MQ=255)                    ttGCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTcgc                                                                                                                                  >  1:454960/1‑149 (MQ=255)                      gCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGGCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCgg                                                                                                                                <  1:510823/149‑1 (MQ=255)                         gccggcggGTTGGGTTCGATGGTGCTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCaa                                                                                                                             <  2:696879/147‑1 (MQ=255)                               gggTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTTGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGCCCCACGCAGTCGCGGCAACCGTCg                                                                                                                       >  2:334320/1‑149 (MQ=255)                                 gTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGCATCACGCAGTCGCGGCAACCGTCGCt                                                                                                                     >  1:514543/1‑149 (MQ=255)                                 gTTGGGTCAGATGGTACTTCGAGGTATCGGGCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACAGTCCCt                                                                                                                     >  1:242594/1‑149 (MQ=255)                                  ttGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTg                                                                                                                    >  2:647145/1‑149 (MQ=255)                                    gggTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAGCCGTCGCTGGt                                                                                                                  >  1:483045/1‑149 (MQ=255)                                      ttctgacggTACTTCGCGGTATCGGTCTTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGACCGTCTGACGCAGGCCGTTGGGCCCGCCCTACGCAGTCGCGGCAACCGTCGCTGGCac                                                                                                                <  2:619783/142‑1 (MQ=255)                                       tCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGAc                                                                                                                                              >  2:559466/1‑118 (MQ=255)                                       tCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGAc                                                                                                                                              <  1:559466/118‑1 (MQ=255)                                          gATGGTACTTCGCGGTATCGGCCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTAcacca                                                                                                            <  1:27335/149‑1 (MQ=255)                                            tGGTAGTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACt                                                                                                          <  1:567978/149‑1 (MQ=255)                                            tGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACt                                                                                                          <  2:454960/149‑1 (MQ=255)                                              gcaCTCCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGGGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGAAGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTgg                                                                                                        <  1:163767/147‑1 (MQ=255)                                                  ttCGCGGTATCGGTCGTCTGGATCTGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCCGGTACACCACTgcgcct                                                                                                    >  1:11851/1‑144 (MQ=255)                                                                       atatGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGACAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCca                                                                               <  2:615961/149‑1 (MQ=255)                                                                            gggCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCcattcat                                                                          >  1:144347/1‑149 (MQ=255)                                                                            gggCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCcattcat                                                                          >  1:278897/1‑149 (MQ=255)                                                                             gggttGCCACCGTTGGCGGCGTCGGGATTGTGATCCGCGCCATTAGCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCcattcatt                                                                         <  2:458163/146‑1 (MQ=255)                                                                             ggCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCcattcatt                                                                         <  1:500461/149‑1 (MQ=255)                                                                                ttGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTCGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAg                                                                      <  2:729656/149‑1 (MQ=255)                                                                                               gcgTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGc                                                       >  2:317165/1‑149 (MQ=255)                                                                                                  tCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTGGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAAGTCTGCACTTGCCCg                                                    >  2:19539/1‑149 (MQ=255)                                                                                                    gggATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTTCTGACCCGCCCATTCATCAAGTAACTCTGCACTTGCCCGGt                                                  >  2:291486/1‑149 (MQ=255)                                                                                                           tgATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCg                                           >  2:340036/1‑149 (MQ=255)                                                                                                                cTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCAAGCAATCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTTTGCACTTGCCCGGTGACGCCGGGCAt                                      >  1:581004/1‑149 (MQ=255)                                                                                                                    ccATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTCACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATc                                  >  1:611717/1‑149 (MQ=255)                                                                                                                     cATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGc                                                                                  >  2:32291/1‑100 (MQ=255)                                                                                                                     cATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGc                                                                                  <  1:32291/100‑1 (MQ=255)                                                                                                                      aTTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCTGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGATGACGCCGGGCATTATCAc                                >  1:581887/1‑149 (MQ=255)                                                                                                                             tCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTCAGTAACGCGGCTCTTTCCCGGTGACGCCGGGCATTATCCCCCTGCCa                         >  1:779313/1‑149 (MQ=255)                                                                                                                             tCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCCTTCTCACCCTCCCa                         >  2:261019/1‑149 (MQ=255)                                                                                                                             tCGATCGTCTGACGCAGGCCGTTGAGCAAAACTCACTCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCACTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCa                         >  1:202521/1‑149 (MQ=255)                                                                                                                               gATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCCACCGTCACTGGGACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGAATTATCACCCTGCCaaa                       >  2:350226/1‑149 (MQ=255)                                                                                                                                aTCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCaaaa                      >  1:653789/1‑149 (MQ=255)                                                                                                                                   gTCTGACTCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGTCGCCGGGCATTATCACCCTGCCaaaaaaa                   <  1:584160/149‑1 (MQ=255)                                                                                                                                   gTCTGACGCAGGGCGTGGGGGCCAACTCACGCAGTAACGGCAACGGTCTGTGGTACACCGCTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCaaaaaaa                   <  2:89093/149‑1 (MQ=255)                                                                                                                                    gcTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAg                  <  1:168317/148‑1 (MQ=255)                                                                                                                                      tGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGa                <  1:340036/149‑1 (MQ=255)                                                                                                                                           cAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAACAAAAGGAAGAAc           >  1:246566/1‑149 (MQ=255)                                                                                                                                                 gTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCg     >  1:711704/1‑149 (MQ=255)                                                                                                                                                    gggCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACa  <  1:495588/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GTGGTCATCGCCTCGATGATTGCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACA  >  NC_000913_3_hsa_tpiA/2806844‑2807139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.