New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 2806992	46 (0.960)	5 (0.110)	5/284	6.1	10.4%	coding (983/1065 nt)	proW	glycine betaine/proline ABC transporter permease
	?	NC_000913_3_hsa_tpiA	= 2807013	40 (0.840)					coding (1004/1065 nt)	proW	glycine betaine/proline ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGC  >  NC_000913_3_hsa_tpiA/2806865‑2807143                                                                                                                                                     |                                                                                                                                   gCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGGCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCgg                                                                                                                                    <  1:510823/149‑1 (MQ=255)    gccggcggGTTGGGTTCGATGGTGCTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCaa                                                                                                                                 <  2:696879/147‑1 (MQ=255)          gggTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTTGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGCCCCACGCAGTCGCGGCAACCGTCg                                                                                                                           >  2:334320/1‑149 (MQ=255)            gTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGCATCACGCAGTCGCGGCAACCGTCGCt                                                                                                                         >  1:514543/1‑149 (MQ=255)            gTTGGGTCAGATGGTACTTCGAGGTATCGGGCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACAGTCCCt                                                                                                                         >  1:242594/1‑149 (MQ=255)             ttGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTg                                                                                                                        >  2:647145/1‑149 (MQ=255)               gggTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAGCCGTCGCTGGt                                                                                                                      >  1:483045/1‑149 (MQ=255)                 ttctgacggTACTTCGCGGTATCGGTCTTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGACCGTCTGACGCAGGCCGTTGGGCCCGCCCTACGCAGTCGCGGCAACCGTCGCTGGCac                                                                                                                    <  2:619783/142‑1 (MQ=255)                     gATGGTACTTCGCGGTATCGGCCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTAcacca                                                                                                                <  1:27335/149‑1 (MQ=255)                       tGGTAGTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACt                                                                                                              <  1:567978/149‑1 (MQ=255)                       tGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACt                                                                                                              <  2:454960/149‑1 (MQ=255)                         gcaCTCCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGGGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGAAGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTgg                                                                                                            <  1:163767/147‑1 (MQ=255)                             ttCGCGGTATCGGTCGTCTGGATCTGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCCGGTACACCACTgcgcct                                                                                                        >  1:11851/1‑144 (MQ=255)                                                  atatGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGACAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCca                                                                                   <  2:615961/149‑1 (MQ=255)                                                       gggCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCcattcat                                                                              >  1:278897/1‑149 (MQ=255)                                                       gggCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCcattcat                                                                              >  1:144347/1‑149 (MQ=255)                                                        gggttGCCACCGTTGGCGGCGTCGGGATTGTGATCCGCGCCATTAGCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCcattcatt                                                                             <  2:458163/146‑1 (MQ=255)                                                        ggCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCcattcatt                                                                             <  1:500461/149‑1 (MQ=255)                                                           ttGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTCGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAg                                                                          <  2:729656/149‑1 (MQ=255)                                                                          gcgTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGc                                                           >  2:317165/1‑149 (MQ=255)                                                                             tCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTGGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAAGTCTGCACTTGCCCg                                                        >  2:19539/1‑149 (MQ=255)                                                                               gggATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTTCTGACCCGCCCATTCATCAAGTAACTCTGCACTTGCCCGGt                                                      >  2:291486/1‑149 (MQ=255)                                                                                      tgATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCg                                               >  2:340036/1‑149 (MQ=255)                                                                                           cTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCAAGCAATCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTTTGCACTTGCCCGGTGACGCCGGGCAt                                          >  1:581004/1‑149 (MQ=255)                                                                                               ccATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTCACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATc                                      >  1:611717/1‑149 (MQ=255)                                                                                                cATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGc                                                                                      >  2:32291/1‑100 (MQ=255)                                                                                                cATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGc                                                                                      <  1:32291/100‑1 (MQ=255)                                                                                                 aTTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCTGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGATGACGCCGGGCATTATCAc                                    >  1:581887/1‑149 (MQ=255)                                                                                                        tCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTCAGTAACGCGGCTCTTTCCCGGTGACGCCGGGCATTATCCCCCTGCCa                             >  1:779313/1‑149 (MQ=255)                                                                                                        tCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCCTTCTCACCCTCCCa                             >  2:261019/1‑149 (MQ=255)                                                                                                        tCGATCGTCTGACGCAGGCCGTTGAGCAAAACTCACTCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCACTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCa                             >  1:202521/1‑149 (MQ=255)                                                                                                          gATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCCACCGTCACTGGGACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGAATTATCACCCTGCCaaa                           >  2:350226/1‑149 (MQ=255)                                                                                                           aTCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCaaaa                          >  1:653789/1‑149 (MQ=255)                                                                                                              gTCTGACTCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGTCGCCGGGCATTATCACCCTGCCaaaaaaa                       <  1:584160/149‑1 (MQ=255)                                                                                                              gTCTGACGCAGGGCGTGGGGGCCAACTCACGCAGTAACGGCAACGGTCTGTGGTACACCGCTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCaaaaaaa                       <  2:89093/149‑1 (MQ=255)                                                                                                               gcTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAg                      <  1:168317/148‑1 (MQ=255)                                                                                                                 tGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGa                    <  1:340036/149‑1 (MQ=255)                                                                                                                      cAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAACAAAAGGAAGAAc               >  1:246566/1‑149 (MQ=255)                                                                                                                            gTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCg         >  1:711704/1‑149 (MQ=255)                                                                                                                               gggCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACa      <  1:495588/149‑1 (MQ=255)                                                                                                                                   gcgACTCACGCAGTCGCGGCAACCGTCGGTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGc  <  2:144347/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                   GCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGC  >  NC_000913_3_hsa_tpiA/2806865‑2807143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.